[←][→] ath   AT5G56190 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001331830.1  NP_001331831.1  NP_001331832.1  NP_001331833.1  NP_001331834.1  NP_568838.1  NP_851199.1 
BLAST NP_001331830.1  NP_001331831.1  NP_001331832.1  NP_001331833.1  NP_001331834.1  NP_568838.1  NP_851199.1 
Orthologous [Ortholog page] AT3G13340 (ath)  AT1G36070 (ath)  AT1G55680 (ath)  AT1G78070 (ath)  LOC4330559 (osa)  LOC4332995 (osa)  LOC4345539 (osa)  LOC7471712 (ppo)  LOC7489180 (ppo)  LOC11407503 (mtr)  LOC11416312 (mtr)  LOC25489425 (mtr)  LOC100249746 (vvi)  LOC100267825 (vvi)  LOC100274157 (zma)  LOC100274637 (zma)  LOC100280227 (zma)  LOC100775453 (gma)  LOC100788712 (gma)  LOC100791929 (gma)  LOC100792497 (gma)  LOC100802991 (gma)  LOC100808557 (gma)  LOC100817036 (gma)  LOC100853325 (vvi)  LOC100853597 (vvi)  LOC101249070 (sly)  LOC101253942 (sly)  LOC103638309 (zma)  LOC103832232 (bra)  LOC103832565 (bra)  LOC103834840 (bra)  LOC103845056 (bra)  LOC103851842 (bra)  LOC103859511 (bra)  LOC103870182 (bra)  LOC103871026 (bra) 
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for NP_001331830.1)
nucl 7,  chlo 1,  cyto 1,  vacu 1,  cysk 1  (predict for NP_001331831.1)
nucl 7,  chlo 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for NP_001331832.1)
chlo 5,  nucl 2,  cyto 1,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001331833.1)
nucl 7,  chlo 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for NP_001331834.1)
nucl 7,  chlo 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for NP_568838.1)
nucl 7,  chlo 1,  cyto 1,  vacu 1,  cysk 1  (predict for NP_851199.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001331830.1)
other 8  (predict for NP_001331831.1)
other 9  (predict for NP_001331832.1)
mito 5  (predict for NP_001331833.1)
other 9  (predict for NP_001331834.1)
other 9  (predict for NP_568838.1)
other 8  (predict for NP_851199.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
ath04144 Endocytosis 2
Genes directly connected with AT5G56190 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 AT5G50840 alpha-taxilin-like protein [detail] 835156
5.4 EDR2 ENHANCED DISEASE RESISTANCE 2 [detail] 827642
5.2 EHD1 EPS15 homology domain 1 [detail] 821573
4.8 AT2G16710 Iron-sulfur cluster biosynthesis family protein [detail] 816172
Coexpressed
gene list		 [Coexpressed gene list for AT5G56190]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248000_at
248000_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248000_at
248000_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248000_at
248000_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835718      
Refseq ID (protein) NP_001331830.1 
NP_001331831.1 
NP_001331832.1 
NP_001331833.1 
NP_001331834.1 
NP_568838.1 
NP_851199.1 


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