ATTED-II : GeneID search result

[←][→] ath At5g56870 Gene

functional annotation

Function

beta-galactosidase 4

GO BP

GO:0010150 [list] [network] leaf senescence	(195 genes)	IEA
GO:0001666 [list] [network] response to hypoxia	(325 genes)	IEA
GO:0009642 [list] [network] response to light intensity	(373 genes)	IEA
GO:0002376 [list] [network] immune system process	(453 genes)	IEA
GO:0006979 [list] [network] response to oxidative stress	(545 genes)	IEA
GO:0050832 [list] [network] defense response to fungus	(705 genes)	IEA
GO:0014070 [list] [network] response to organic cyclic compound	(807 genes)	IEA
GO:0009611 [list] [network] response to wounding	(816 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(844 genes)	IEA
GO:0009414 [list] [network] response to water deprivation	(1006 genes)	IEA
GO:0044248 [list] [network] cellular catabolic process	(1086 genes)	IEA
GO:1901575 [list] [network] organic substance catabolic process	(1156 genes)	IEA
GO:0009617 [list] [network] response to bacterium	(1192 genes)	IEA

GO CC

GO:0005576 [list] [network] extracellular region	(3154 genes)	ISM
GO:0009536 [list] [network] plastid	(5425 genes)	HDA

GO MF

GO:0004565 [list] [network] beta-galactosidase activity

(12 genes)

TAS

KEGG

Protein

NP_200498.1

BLAST

NP_200498.1

Orthologous

[Ortholog page] TBG3 (sly) TBG6 (sly) TBG4 (sly) TBG1 (sly) BGAL1 (ath) BGAL2 (ath) BGAL12 (ath) BGAL3 (ath) BGAL5 (ath) LOC4324191 (osa) LOC4328745 (osa) LOC4331730 (osa) LOC4341358 (osa) LOC7470014 (ppo) LOC7480151 (ppo) LOC7493931 (ppo) LOC7497590 (ppo) LOC11405663 (mtr) LOC11414214 (mtr) LOC11419221 (mtr) LOC11441599 (mtr) LOC11441981 (mtr) LOC18094855 (ppo) LOC18096747 (ppo) LOC25490234 (mtr) LOC25500443 (mtr) LOC100780897 (gma) LOC100781074 (gma) LOC100781959 (gma) LOC100785688 (gma) LOC100787084 (gma) LOC100792629 (gma) LOC100795144 (gma) LOC100798501 (gma) LOC100804103 (gma) LOC100810170 (gma) LOC100811187 (gma) LOC100814111 (gma) LOC100818981 (gma) LOC101245759 (sly) LOC101258163 (sly) LOC103833120 (bra) LOC103842580 (bra) LOC103851804 (bra) LOC103854367 (bra) LOC103856789 (bra) LOC103861613 (bra) LOC103863929 (bra) LOC103868724 (bra) LOC103870099 (bra) LOC103872148 (bra) LOC104645427 (sly) LOC106795462 (gma) LOC120577612 (mtr) LOC123061350 (tae) LOC123069989 (tae) LOC123093264 (tae) LOC123098531 (tae) LOC123127316 (tae) LOC123136993 (tae) LOC123144393 (tae) LOC123148048 (tae) LOC123159577 (tae) LOC123165480 (tae) LOC123402796 (hvu) LOC123411615 (hvu) LOC123443769 (hvu) LOC123449529 (hvu)

Subcellular
localization
wolf

chlo 4, vacu 2, chlo_mito 2, extr 1, E.R._vacu 1

(predict for NP_200498.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_200498.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	4
ath00052	Galactose metabolism	3
ath00640	Propanoate metabolism	2
ath00051	Fructose and mannose metabolism	2
ath01250	Biosynthesis of nucleotide sugars	2

Genes directly connected with BGAL4 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
10.1	BXL1	beta-xylosidase 1	[detail]	834996
6.5	AT5G57655	xylose isomerase family protein	[detail]	835871
6.4	BGAL1	beta galactosidase 1	[detail]	820584
4.9	AT2G37130	Peroxidase superfamily protein	[detail]	818289
4.8	PSK4	phytosulfokine 4 precursor	[detail]	824140

Coexpressed
gene list

[Coexpressed gene list for BGAL4]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247954_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247954_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247954_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835789
Refseq ID (protein)	NP_200498.1

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