[←][→] ath   AT5G56980 Gene
functional annotation
Function   cotton fiber protein  
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
KEGG
Protein NP_568845.1 
BLAST NP_568845.1 
Orthologous [Ortholog page] AT2G26110 (ath)  AT4G26130 (ath)  LOC4327827 (osa)  LOC4341332 (osa)  LOC7462259 (ppo)  LOC7476653 (ppo)  LOC7484676 (ppo)  LOC11411531 (mtr)  LOC25494230 (mtr)  LOC25494233 (mtr)  LOC100247359 (vvi)  LOC100249297 (vvi)  LOC100775337 (gma)  LOC100781094 (gma)  LOC101244302 (sly)  LOC101258979 (sly)  LOC102664184 (gma)  LOC102670321 (gma)  LOC103638468 (zma)  LOC103841385 (bra)  LOC103845131 (bra)  LOC103851795 (bra)  LOC103863917 (bra)  LOC104647394 (sly) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  extr 1,  cyto_nucl 1  (predict for NP_568845.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_568845.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with AT5G56980 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 AT1G61890 MATE efflux family protein [detail] 842485
7.4 AT1G75230 DNA glycosylase superfamily protein [detail] 843860
6.6 JAZ7 jasmonate-zim-domain protein 7 [detail] 818025
4.8 AT5G19230 Glycoprotein membrane precursor GPI-anchored [detail] 832043
Coexpressed
gene list		 [Coexpressed gene list for AT5G56980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247933_at
247933_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247933_at
247933_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247933_at
247933_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835800      
Refseq ID (protein) NP_568845.1 


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