ATTED-II : GeneID search result

[←][→] ath At5g57190 Gene

functional annotation

Function

phosphatidylserine decarboxylase 2

GO BP

GO CC

GO:0009705 [list] [network] plant-type vacuole membrane	(112 genes)	IDA
GO:0005739 [list] [network] mitochondrion	(4228 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(13880 genes)	ISM

GO MF

GO:0004609 [list] [network] phosphatidylserine decarboxylase activity

(3 genes)

IDA IMP

KEGG

ath00564 [list] [network] Glycerophospholipid metabolism (99 genes)

Protein

NP_001330975.1 NP_200529.4

BLAST

NP_001330975.1 NP_200529.4

Orthologous

[Ortholog page] PSD3 (ath) LOC4325237 (osa) LOC7478365 (ppo) LOC11420633 (mtr) LOC18094730 (ppo) LOC100794517 (gma) LOC101266981 (sly) LOC103863759 (bra) LOC123063514 (tae) LOC123072621 (tae) LOC123080807 (tae) LOC123445581 (hvu)

Subcellular
localization
wolf

nucl 4, cyto 4, cyto_nucl 4	(predict for NP_001330975.1)
nucl 4, cyto 2, vacu 2, E.R. 1	(predict for NP_200529.4)

Subcellular
localization
TargetP

mito 4, chlo 4	(predict for NP_001330975.1)
mito 4, chlo 4	(predict for NP_200529.4)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with PSD2 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
8.2	AAP4	amino acid permease 4	[detail]	836505
6.5	AT1G06830	Glutaredoxin family protein	[detail]	837195
5.1	AT2G36650	CHUP1-like protein	[detail]	818237
4.3	MTPB1	metal tolerance protein B1	[detail]	817490
3.6	AT2G03505	Carbohydrate-binding X8 domain superfamily protein	[detail]	814879

Coexpressed
gene list

[Coexpressed gene list for PSD2]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247940_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247940_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247940_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835825
Refseq ID (protein)	NP_001330975.1
Refseq ID (protein)	NP_200529.4

The preparation time of this page was 0.1 [sec].