[←][→] ath   At5g57280 Gene
functional annotation
Function   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1990110 [list] [network] callus formation  (29 genes)  IMP  
GO:0010078 [list] [network] maintenance of root meristem identity  (40 genes)  IMP  
GO:0048527 [list] [network] lateral root development  (128 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (169 genes)  IMP  
GO:0048364 [list] [network] root development  (1192 genes)  IMP  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
KEGG
Protein NP_200538.1 
BLAST NP_200538.1 
Orthologous [Ortholog page] LOC4331056 (osa)  LOC7467679 (ppo)  LOC7476668 (ppo)  LOC11420496 (mtr)  LOC11421941 (mtr)  LOC100792606 (gma)  LOC101247928 (sly)  LOC103856762 (bra)  LOC123128859 (tae)  LOC123139362 (tae)  LOC123146005 (tae)  LOC123402840 (hvu) 
Subcellular
localization
wolf
nucl 8,  cysk 1  (predict for NP_200538.1)
Subcellular
localization
TargetP
other 8  (predict for NP_200538.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with RID2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.3 PPAN PETER PAN-like protein [detail] 836299
13.6 AT3G13230 RNA-binding KH domain-containing protein [detail] 820521
12.9 MEE49 Ribosomal RNA processing Brix domain protein [detail] 828136
10.6 EDA14 embryo sac development arrest 14 [detail] 825207
10.0 RRP4 ribosomal RNA processing 4 [detail] 839521
6.4 AT5G11010 Pre-mRNA cleavage complex II protein family [detail] 830968
Coexpressed
gene list		 [Coexpressed gene list for RID2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247926_at
247926_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247926_at
247926_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247926_at
247926_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835833      
Refseq ID (protein) NP_200538.1 


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