[←][→] ath   At5g57530 Gene
functional annotation
Function   xyloglucan endotransglucosylase/hydrolase 12    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010411 [list] [network] xyloglucan metabolic process  (48 genes)  IDA  
GO:0042546 [list] [network] cell wall biogenesis  (399 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  HDA  
GO MF
GO:0033946 [list] [network] xyloglucan-specific endo-beta-1,4-glucanase activity  (7 genes)  IDA  
GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity  (32 genes)  IDA  
GO:0030247 [list] [network] polysaccharide binding  (94 genes)  ISS  
KEGG
Protein NP_200561.1 
BLAST NP_200561.1 
Orthologous [Ortholog page] XTH13 (ath)  LOC103845187 (bra) 
Subcellular
localization
wolf
extr 6,  chlo 1,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_200561.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_200561.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 4
Genes directly connected with XTH12 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
24.2 XTH13 xyloglucan endotransglucosylase/hydrolase 13 [detail] 835858
19.2 PRP1 proline-rich protein 1 [detail] 841938
18.7 RHS18 root hair specific 18 [detail] 832302
17.0 AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 830378
17.0 EXT13 proline-rich extensin-like family protein [detail] 833473
15.9 AT1G34510 Peroxidase superfamily protein [detail] 840353
15.5 XTH26 xyloglucan endotransglucosylase/hydrolase 26 [detail] 829006
13.7 AT3G49960 Peroxidase superfamily protein [detail] 824158
8.5 AT5G63270 RPM1-interacting protein 4 (RIN4) family protein [detail] 836447
Coexpressed
gene list		 [Coexpressed gene list for XTH12]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247871_at
247871_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247871_at
247871_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247871_at
247871_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835857      
Refseq ID (protein) NP_200561.1 


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