[←][→] ath   At5g57540 Gene
functional annotation
Function   xyloglucan endotransglucosylase/hydrolase 13    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010411 [list] [network] xyloglucan metabolic process  (48 genes)  IDA  
GO:0042546 [list] [network] cell wall biogenesis  (399 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0033946 [list] [network] xyloglucan-specific endo-beta-1,4-glucanase activity  (7 genes)  IDA  
GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity  (32 genes)  IDA  
GO:0030247 [list] [network] polysaccharide binding  (94 genes)  ISS  
KEGG
Protein NP_200562.1 
BLAST NP_200562.1 
Orthologous [Ortholog page] XTH12 (ath)  LOC103845187 (bra) 
Subcellular
localization
wolf
extr 6,  chlo 2,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_200562.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_200562.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
Genes directly connected with XTH13 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
24.2 XTH12 xyloglucan endotransglucosylase/hydrolase 12 [detail] 835857
20.0 PRP1 proline-rich protein 1 [detail] 841938
18.9 RHS18 root hair specific 18 [detail] 832302
16.8 XTH26 xyloglucan endotransglucosylase/hydrolase 26 [detail] 829006
15.5 RHS12 root hair specific 12 [detail] 820240
11.3 MES15 methyl esterase 15 [detail] 843255
10.5 PPa3 pyrophosphorylase 3 [detail] 819299
10.5 UCC3 uclacyanin 3 [detail] 825199
9.2 ROPGEF12 RHO guanyl-nucleotide exchange factor 12 [detail] 844325
8.8 AT5G63270 RPM1-interacting protein 4 (RIN4) family protein [detail] 836447
6.3 AT5G03640 Protein kinase superfamily protein [detail] 831770
4.7 AT5G06990 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) [detail] 830590
Coexpressed
gene list		 [Coexpressed gene list for XTH13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247914_at
247914_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247914_at
247914_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247914_at
247914_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835858      
Refseq ID (protein) NP_200562.1 


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