[←][→] ath   At5g57960 Gene
functional annotation
Function   GTP-binding protein, HflX    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO:0044281 [list] [network] small molecule metabolic process  (2411 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_001331750.1  NP_200604.1 
BLAST NP_001331750.1  NP_200604.1 
Orthologous [Ortholog page] LOC4350828 (osa)  LOC7471934 (ppo)  LOC11414548 (mtr)  LOC100803039 (gma)  LOC101261514 (sly)  LOC103851673 (bra)  LOC123097085 (tae)  LOC123448334 (hvu) 
Subcellular
localization
wolf
cyto 7,  chlo 2  (predict for NP_001331750.1)
chlo 7,  cyto 1,  nucl 1,  mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_200604.1)
Subcellular
localization
TargetP
mito 8,  other 6  (predict for NP_001331750.1)
chlo 8  (predict for NP_200604.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 2
ath00906 Carotenoid biosynthesis 2
Genes directly connected with AT5G57960 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.9 AT5G42310 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 834236
7.3 ZDS zeta-carotene desaturase [detail] 819647
6.8 ACDO1 Protein kinase superfamily protein [detail] 829266
4.5 OST1 Protein kinase superfamily protein [detail] 829541
Coexpressed
gene list		 [Coexpressed gene list for AT5G57960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247891_at
247891_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247891_at
247891_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247891_at
247891_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835907      
Refseq ID (protein) NP_001331750.1 
NP_200604.1 


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