[←][→] ath   At5g58720 Gene
functional annotation
Function   smr (Small MutS Related) domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0008219 [list] [network] cell death  (126 genes)  IEA  
GO:0006955 [list] [network] immune response  (182 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IEA  
GO:0016310 [list] [network] phosphorylation  (785 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:1901701 [list] [network] cellular response to oxygen-containing compound  (1115 genes)  IEA  
GO:0071310 [list] [network] cellular response to organic substance  (1485 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0006952 [list] [network] defense response  (2370 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG
Protein NP_001119459.1  NP_001119460.1  NP_200680.1 
BLAST NP_001119459.1  NP_001119460.1  NP_200680.1 
Orthologous [Ortholog page] LOC4326736 (osa)  LOC7468560 (ppo)  LOC25490868 (mtr)  LOC100791618 (gma)  LOC100795279 (gma)  LOC101265645 (sly)  LOC103851626 (bra)  LOC103856666 (bra)  LOC123060758 (tae)  LOC123069315 (tae)  LOC123077837 (tae)  LOC123443224 (hvu) 
Subcellular
localization
wolf
nucl 9,  cysk 1,  golg_plas 1  (predict for NP_001119459.1)
nucl 9,  cysk 1,  golg_plas 1  (predict for NP_001119460.1)
nucl 9,  cysk 1,  golg_plas 1  (predict for NP_200680.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001119459.1)
other 8  (predict for NP_001119460.1)
other 8  (predict for NP_200680.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath00564 Glycerophospholipid metabolism 2
Genes directly connected with AT5G58720 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 SYP42 syntaxin of plants 42 [detail] 827505
7.3 ALA3 aminophospholipid ATPase 3 [detail] 842275
7.0 KEU Sec1/munc18-like (SM) proteins superfamily [detail] 837791
6.8 AT3G45040 phosphatidate cytidylyltransferase family protein [detail] 823639
5.6 AT1G17145 RING/U-box superfamily protein [detail] 838285
5.6 CK1 choline kinase 1 [detail] 843500
4.8 AT3G11420 beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604) [detail] 820315
Coexpressed
gene list		 [Coexpressed gene list for AT5G58720]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247790_at
247790_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247790_at
247790_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247790_at
247790_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835986      
Refseq ID (protein) NP_001119459.1 
NP_001119460.1 
NP_200680.1 


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