[←][→] ath   At5g58760 Gene
functional annotation
Function   damaged DNA binding 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010224 [list] [network] response to UV-B  (75 genes)  IEP IMP  
GO:0006281 [list] [network] DNA repair  (203 genes)  IMP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  IEA ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003684 [list] [network] damaged DNA binding  (9 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03420 [list] [network] Nucleotide excision repair (62 genes)
ath04120 [list] [network] Ubiquitin mediated proteolysis (155 genes)
Protein NP_001332069.1  NP_200684.2 
BLAST NP_001332069.1  NP_200684.2 
Orthologous [Ortholog page] LOC4325482 (osa)  LOC7478534 (ppo)  LOC11405495 (mtr)  LOC100527914 (gma)  LOC100793506 (gma)  LOC101265575 (sly)  LOC103851625 (bra)  LOC123060019 (tae)  LOC123068492 (tae)  LOC123076991 (tae)  LOC123442607 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001332069.1)
nucl 5,  mito 3,  chlo 2  (predict for NP_200684.2)
Subcellular
localization
TargetP
other 4  (predict for NP_001332069.1)
other 6,  mito 3  (predict for NP_200684.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
ath03018 RNA degradation 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with DDB2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.7 HY5 Basic-leucine zipper (bZIP) transcription factor family protein [detail] 830996
9.0 TZP zinc knuckle (CCHC-type) family protein [detail] 834383
8.0 ABCI20 non-intrinsic ABC protein 9 [detail] 831709
7.1 AT2G41000 Chaperone DnaJ-domain superfamily protein [detail] 818700
6.1 ECT8 evolutionarily conserved C-terminal region 8 [detail] 844267
5.3 SMZ Integrase-type DNA-binding superfamily protein [detail] 824664
5.3 PHT3;3 phosphate transporter 3;3 [detail] 816233
4.8 AT2G32295 EXS (ERD1/XPR1/SYG1) family protein [detail] 817790
Coexpressed
gene list		 [Coexpressed gene list for DDB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247779_at
247779_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247779_at
247779_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247779_at
247779_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835990      
Refseq ID (protein) NP_001332069.1 
NP_200684.2 


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