[←][→] ath   AT5G58760 Gene
functional annotation
Function   damaged DNA binding 2  
GO BP
GO:0010224 [list] [network] response to UV-B  (71 genes)  IEP IMP  
GO:0009411 [list] [network] response to UV  (120 genes)  IBA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IBA IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001332069.1  NP_200684.2 
BLAST NP_001332069.1  NP_200684.2 
Orthologous [Ortholog page] LOC4325482 (osa)  LOC7478534 (ppo)  LOC11405495 (mtr)  LOC100250121 (vvi)  LOC100381699 (zma)  LOC100527914 (gma)  LOC100793506 (gma)  LOC101265575 (sly)  LOC103851625 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001332069.1)
nucl 5,  mito 3,  chlo 2  (predict for NP_200684.2)
Subcellular
localization
TargetP
other 4  (predict for NP_001332069.1)
other 6,  mito 3  (predict for NP_200684.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
ath03018 RNA degradation 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with DDB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 TZP zinc knuckle (CCHC-type) family protein [detail] 834383
8.6 HY5 Basic-leucine zipper (bZIP) transcription factor family protein [detail] 830996
7.1 ABCI20 non-intrinsic ABC protein 9 [detail] 831709
4.6 PHT3;3 phosphate transporter 3;3 [detail] 816233
4.6 SMZ Integrase-type DNA-binding superfamily protein [detail] 824664
4.2 AT3G16350 Homeodomain-like superfamily protein [detail] 820882
Coexpressed
gene list		 [Coexpressed gene list for DDB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247779_at
247779_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247779_at
247779_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247779_at
247779_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835990      
Refseq ID (protein) NP_001332069.1 
NP_200684.2 


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