[←][→] ath   AT5G59380 Gene
functional annotation
Function   methyl-CPG-binding domain 6  
GO BP
GO:0031047 [list] [network] gene silencing by RNA  (183 genes)  IEA  
GO CC
GO:0005731 [list] [network] nucleolus organizer region  (2 genes)  IDA  
GO:0010370 [list] [network] perinucleolar chromocenter  (2 genes)  IDA  
GO:0005720 [list] [network] nuclear heterochromatin  (12 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0051747 [list] [network] cytosine C-5 DNA demethylase activity  (6 genes)  IDA  
GO:0008327 [list] [network] methyl-CpG binding  (16 genes)  IDA ISS  
GO:0043621 [list] [network] protein self-association  (96 genes)  IDA  
GO:0019899 [list] [network] enzyme binding  (436 genes)  IPI  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_200746.1 
BLAST NP_200746.1 
Orthologous [Ortholog page] MBD5 (ath)  MBD7 (ath)  LOC7485704 (ppo)  LOC7488137 (ppo)  LOC11408909 (mtr)  LOC11412807 (mtr)  LOC25491275 (mtr)  LOC100243225 (vvi)  LOC100255377 (vvi)  LOC100779601 (gma)  LOC100795916 (gma)  LOC100853337 (vvi)  MBD5 (sly)  LOC101267579 (sly)  LOC103845401 (bra)  LOC103846163 (bra)  LOC103851547 (bra)  LOC103851580 (bra)  LOC103856605 (bra)  LOC103856635 (bra)  LOC103873723 (bra)  LOC109123718 (vvi) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_200746.1)
Subcellular
localization
TargetP
other 7  (predict for NP_200746.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with MBD6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 AT5G57370 U4/U6.U5 small nuclear ribonucleoprotein [detail] 835843
7.3 ATU2AF35A U2 snRNP auxiliary factor small subunit [detail] 839657
6.9 AT4G08460 hypothetical protein (DUF1644) [detail] 826405
6.4 CCMH cytochrome c biogenesis protein family [detail] 838089
5.7 AT3G13440 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 820545
5.6 emb2731 Uncharacterized protein family (UPF0172) [detail] 835692
Coexpressed
gene list		 [Coexpressed gene list for MBD6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247724_at
247724_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247724_at
247724_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247724_at
247724_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836057      
Refseq ID (protein) NP_200746.1 


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