[←][→] ath   AT5G59460 Gene
functional annotation
Function   scarecrow-like transcription factor 11 (SCL11)  
GO BP
GO:0000460 [list] [network] maturation of 5.8S rRNA  (18 genes)  IBA  
GO CC
GO:0000176 [list] [network] nuclear exosome (RNase complex)  (13 genes)  IBA  
GO MF
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001330367.1  NP_568908.1 
BLAST NP_001330367.1  NP_568908.1 
Orthologous [Ortholog page] LOC4325469 (osa)  LOC7481528 (ppo)  LOC11417386 (mtr)  LOC100267367 (vvi)  LOC100277744 (zma)  LOC100500463 (gma)  LOC100500671 (gma)  LOC101255403 (sly)  LOC103845371 (bra)  LOC103851578 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  plas 1,  golg 1,  golg_plas 1  (predict for NP_001330367.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_568908.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001330367.1)
other 4,  mito 3  (predict for NP_568908.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G59460 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 AT2G40780 Nucleic acid-binding, OB-fold-like protein [detail] 818675
5.4 AT5G44450 alpha amino-terminal protein methyltransferase [detail] 834472
5.2 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 824818
Coexpressed
gene list		 [Coexpressed gene list for AT5G59460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247705_at
247705_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247705_at
247705_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247705_at
247705_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836065      
Refseq ID (protein) NP_001330367.1 
NP_568908.1 


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