ATTED-II : GeneID search result

[←][→] ath At5g59540 Gene

functional annotation

Function

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

GO BP

GO:0009873 [list] [network] ethylene-activated signaling pathway	(80 genes)	IEA
GO:0009968 [list] [network] negative regulation of signal transduction	(123 genes)	IEA
GO:0050832 [list] [network] defense response to fungus	(705 genes)	IEA
GO:0031347 [list] [network] regulation of defense response	(749 genes)	IEA
GO:0006970 [list] [network] response to osmotic stress	(883 genes)	IEA
GO:0042742 [list] [network] defense response to bacterium	(980 genes)	IEA
GO:0009737 [list] [network] response to abscisic acid	(1086 genes)	IEA
GO:0043436 [list] [network] oxoacid metabolic process	(1714 genes)	IEA
GO:0010035 [list] [network] response to inorganic substance	(2100 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(13880 genes)

ISM

GO MF

KEGG

Protein

NP_001032104.1 NP_200762.1

BLAST

NP_001032104.1 NP_200762.1

Orthologous

[Ortholog page] E8 (sly) AT2G25450 (ath) AT2G30830 (ath) AT2G30840 (ath) AT3G61400 (ath) AT5G43440 (ath) AT5G43450 (ath) AT5G59530 (ath) AT1G06620 (ath) AT1G06640 (ath) AT1G06650 (ath) AT1G03400 (ath) 2A6 (ath) AT1G04380 (ath) AT1G04350 (ath) AT1G06645 (ath) LOC4333774 (osa) LOC4335099 (osa) LOC7474620 (ppo) LOC7476902 (ppo) LOC7479980 (ppo) LOC7485152 (ppo) LOC7487408 (ppo) LOC7498016 (ppo) LOC7498017 (ppo) LOC7498018 (ppo) LOC11405673 (mtr) LOC11406189 (mtr) LOC11408358 (mtr) LOC11409009 (mtr) LOC11409250 (mtr) LOC11409504 (mtr) LOC11409765 (mtr) LOC11410509 (mtr) LOC11410704 (mtr) LOC11410782 (mtr) LOC11410784 (mtr) LOC11413339 (mtr) LOC11418386 (mtr) LOC11418387 (mtr) LOC11419853 (mtr) LOC11421214 (mtr) LOC11424282 (mtr) LOC11429536 (mtr) LOC11429538 (mtr) LOC11431109 (mtr) LOC11434481 (mtr) LOC11434538 (mtr) LOC11434967 (mtr) LOC11438884 (mtr) LOC18101595 (ppo) LOC18102482 (ppo) LOC18106584 (ppo) LOC18106587 (ppo) LOC25479840 (mtr) LOC25483008 (mtr) LOC25484298 (mtr) LOC25493597 (mtr) LOC25494048 (mtr) LOC25497878 (mtr) LOC25498293 (mtr) LOC25498303 (mtr) LOC25500056 (mtr) LOC25500804 (mtr) ODD (sly) LOC100777564 (gma) LOC100778953 (gma) LOC100781078 (gma) LOC100781624 (gma) LOC100785833 (gma) LOC100786255 (gma) LOC100787331 (gma) LOC100789941 (gma) LOC100790198 (gma) LOC100792296 (gma) LOC100792753 (gma) LOC100806682 (gma) LOC100809768 (gma) LOC100815823 (gma) LOC100815890 (gma) LOC101244528 (sly) LOC101245098 (sly) LOC101245399 (sly) LOC101245697 (sly) LOC101245991 (sly) LOC101246865 (sly) LOC101247162 (sly) LOC101248415 (sly) LOC101249199 (sly) LOC101249481 (sly) LOC101250009 (sly) LOC101250295 (sly) LOC101259580 (sly) LOC101259885 (sly) LOC101260178 (sly) ACO3 (sly) LOC102659434 (gma) LOC102659833 (gma) LOC102667868 (gma) LOC102668613 (gma) LOC102669426 (gma) LOC103836579 (bra) LOC103841969 (bra) LOC103843501 (bra) LOC103843502 (bra) LOC103843543 (bra) LOC103843658 (bra) LOC103844023 (bra) LOC103844024 (bra) LOC103844025 (bra) LOC103844262 (bra) LOC103844264 (bra) LOC103844266 (bra) LOC103844507 (bra) LOC103844509 (bra) LOC103856626 (bra) LOC103856627 (bra) LOC103856628 (bra) LOC103856629 (bra) GSL-OH (bra) LOC103865075 (bra) LOC103865076 (bra) LOC103865077 (bra) LOC103865078 (bra) LOC103865081 (bra) LOC103869588 (bra) LOC106798825 (gma) LOC117125692 (bra) LOC117128368 (bra) LOC123040041 (tae) LOC123040049 (tae) LOC123043181 (tae) LOC123048248 (tae) LOC123048250 (tae) LOC123048251 (tae) LOC123051068 (tae) LOC123051075 (tae) LOC123058656 (tae) LOC123072301 (tae) LOC123074846 (tae) LOC123076530 (tae) LOC123088671 (tae) LOC123111152 (tae) LOC123176144 (tae) LOC123180396 (tae) LOC123184283 (tae) LOC123184284 (tae) LOC123184287 (tae) LOC123184291 (tae) LOC123186187 (tae) LOC123186994 (tae) LOC123187000 (tae) LOC123190830 (tae) LOC123407181 (hvu) LOC123408335 (hvu) LOC123424365 (hvu) LOC123424367 (hvu) LOC123424865 (hvu) LOC123429116 (hvu) LOC123429118 (hvu) LOC123440337 (hvu)

Subcellular
localization
wolf

cyto 7, nucl 1, pero 1	(predict for NP_001032104.1)
cyto 7, pero 1, nucl 1, cysk 1, cysk_nucl 1	(predict for NP_200762.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001032104.1)
other 8	(predict for NP_200762.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G59540 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
4.8	AT5G43450	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[detail]	834365
4.8	SPP2	sucrose-6F-phosphate phosphohydrolase 2	[detail]	824399
4.5	AT1G64710	GroES-like zinc-binding alcohol dehydrogenase family protein	[detail]	842779
4.5	AT4G34920	PLC-like phosphodiesterases superfamily protein	[detail]	829644
3.5	PTR5	peptide transporter 5	[detail]	831725
3.2	AT1G08847		[detail]	28716923

Coexpressed
gene list

[Coexpressed gene list for AT5G59540]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247679_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247679_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247679_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	836073
Refseq ID (protein)	NP_001032104.1
Refseq ID (protein)	NP_200762.1

The preparation time of this page was 2.5 [sec].