ATTED-II : GeneID search result

[←][→] ath AT5G59540 Gene

functional annotation

Function

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

GO BP

GO:0055114 [list] [network] oxidation-reduction process

(1468 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(14855 genes)

ISM

GO MF

GO:0051213 [list] [network] dioxygenase activity	(147 genes)	IBA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_001032104.1 NP_200762.1

BLAST

NP_001032104.1 NP_200762.1

Orthologous

[Ortholog page] E8 (sly) AT2G25450 (ath) AT2G30830 (ath) AT2G30840 (ath) AT3G61400 (ath) AT5G43440 (ath) AT5G43450 (ath) AT5G59530 (ath) AT1G06620 (ath) AT1G06640 (ath) AT1G06650 (ath) AT1G03400 (ath) 2A6 (ath) AT1G04380 (ath) AT1G04350 (ath) AT1G06645 (ath) LOC4333774 (osa) LOC4335099 (osa) LOC7474620 (ppo) LOC7485152 (ppo) LOC7498016 (ppo) LOC7498017 (ppo) LOC7498018 (ppo) LOC11405673 (mtr) LOC11406189 (mtr) LOC11408358 (mtr) LOC11409009 (mtr) LOC11409250 (mtr) LOC11409504 (mtr) LOC11409765 (mtr) LOC11410509 (mtr) LOC11410704 (mtr) LOC11410782 (mtr) LOC11410784 (mtr) LOC11413339 (mtr) LOC11415384 (mtr) LOC11418386 (mtr) LOC11418387 (mtr) LOC11419853 (mtr) LOC11421214 (mtr) LOC11424282 (mtr) LOC11428587 (mtr) LOC11429536 (mtr) LOC11429538 (mtr) LOC11431109 (mtr) LOC11434481 (mtr) LOC11434538 (mtr) LOC11434967 (mtr) LOC11438884 (mtr) LOC25479840 (mtr) LOC25483008 (mtr) LOC25494048 (mtr) LOC25497878 (mtr) LOC25498293 (mtr) LOC25498303 (mtr) LOC25500056 (mtr) LOC25500804 (mtr) ODD (sly) LOC100192706 (zma) LOC100232930 (vvi) LOC100247670 (vvi) LOC100251035 (vvi) LOC100255665 (vvi) LOC100256229 (vvi) LOC100257928 (vvi) LOC100257959 (vvi) LOC100259642 (vvi) LOC100260734 (vvi) LOC100264824 (vvi) LOC100266164 (vvi) LOC100272887 (zma) LOC100777564 (gma) LOC100781078 (gma) LOC100781624 (gma) LOC100786255 (gma) LOC100787331 (gma) LOC100789941 (gma) LOC100790198 (gma) LOC100792296 (gma) LOC100792753 (gma) LOC100800882 (gma) LOC100815823 (gma) LOC100815890 (gma) LOC101244528 (sly) LOC101245098 (sly) LOC101245399 (sly) LOC101245697 (sly) LOC101245991 (sly) LOC101246865 (sly) LOC101248415 (sly) LOC101249199 (sly) LOC101249481 (sly) LOC101250009 (sly) LOC101250295 (sly) LOC101259580 (sly) ACO3 (sly) LOC102659434 (gma) LOC102659833 (gma) LOC102667868 (gma) LOC102669426 (gma) LOC103642471 (zma) LOC103836579 (bra) LOC103841969 (bra) LOC103843501 (bra) LOC103843502 (bra) LOC103843543 (bra) LOC103843658 (bra) LOC103844023 (bra) LOC103844024 (bra) LOC103844025 (bra) LOC103844262 (bra) LOC103844264 (bra) LOC103844266 (bra) LOC103844507 (bra) LOC103844509 (bra) LOC103856626 (bra) LOC103856627 (bra) LOC103856628 (bra) GSL-OH (bra) LOC103865075 (bra) LOC103865076 (bra) LOC103865077 (bra) LOC103865078 (bra) LOC103865081 (bra) LOC104879284 (vvi) LOC104879286 (vvi) LOC106798825 (gma) LOC109121508 (vvi) LOC109122663 (vvi)

Subcellular
localization
wolf

cyto 7, nucl 1, pero 1	(predict for NP_001032104.1)
cyto 7, pero 1, nucl 1, cysk 1, cysk_nucl 1	(predict for NP_200762.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001032104.1)
other 8	(predict for NP_200762.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G59540 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.7	AT1G29120	Hydrolase-like protein family	[detail]	839787
4.3	TGA7	bZIP transcription factor family protein	[detail]	844127
4.1	AT5G43450	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[detail]	834365
4.0	PTR5	peptide transporter 5	[detail]	831725

Coexpressed
gene list

[Coexpressed gene list for AT5G59540]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247679_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247679_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247679_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	836073
Refseq ID (protein)	NP_001032104.1
Refseq ID (protein)	NP_200762.1

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