[←][→] ath   AT5G59750 Gene
functional annotation
Function   monofunctional riboflavin biosynthesis protein RIBA 3  
GO BP
GO:0009231 [list] [network] riboflavin biosynthetic process  (12 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0003935 [list] [network] GTP cyclohydrolase II activity  (4 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (248 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00740 [list] [network] Riboflavin metabolism (18 genes)
ath00790 [list] [network] Folate biosynthesis (26 genes)
Protein NP_001190571.1  NP_001332607.1  NP_568913.1 
BLAST NP_001190571.1  NP_001332607.1  NP_568913.1 
Orthologous [Ortholog page] LOC4339017 (osa)  LOC7465134 (ppo)  LOC11412806 (mtr)  LOC100267389 (vvi)  LOC100282823 (zma)  LOC100786573 (gma)  LOC101263281 (sly)  LOC103851554 (bra) 
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for NP_001190571.1)
chlo 5,  mito 2,  cyto 1,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001332607.1)
chlo 7,  cyto 1,  mito 1,  vacu 1,  cyto_nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_568913.1)
Subcellular
localization
TargetP
mito 2  (predict for NP_001190571.1)
mito 2  (predict for NP_001332607.1)
mito 2  (predict for NP_568913.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin and chlorophyll metabolism 2
Genes directly connected with RIBA3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT5G13770 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 831222
6.0 JAC1 J-domain protein required for chloroplast accumulation response 1 [detail] 843847
5.9 AT1G66130 NAD(P)-binding Rossmann-fold superfamily protein [detail] 842927
5.4 AT4G32190 Myosin heavy chain-related protein [detail] 829352
5.1 WNK2 with no lysine (K) kinase 2 [detail] 821810
Coexpressed
gene list		 [Coexpressed gene list for RIBA3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247694_at
247694_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247694_at
247694_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247694_at
247694_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836096      
Refseq ID (protein) NP_001190571.1 
NP_001332607.1 
NP_568913.1 


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