[←][→] ath   AT5G60540 Gene
functional annotation
Function   pyridoxine biosynthesis 2  
GO BP
GO:0042823 [list] [network] pyridoxal phosphate biosynthetic process  (7 genes)  IBA IEA  
GO:0008614 [list] [network] pyridoxine metabolic process  (8 genes)  IBA  
GO:0042819 [list] [network] vitamin B6 biosynthetic process  (9 genes)  IBA IGI IMP  
GO:0006541 [list] [network] glutamine metabolic process  (29 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  NAS  
GO CC
GO:1903600 [list] [network] glutaminase complex  (1 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0036381 [list] [network] pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity  (3 genes)  IEA  
GO:0004359 [list] [network] glutaminase activity  (7 genes)  IBA IDA ISS  
GO:0046982 [list] [network] protein heterodimerization activity  (122 genes)  IPI  
KEGG ath00750 [list] [network] Vitamin B6 metabolism (15 genes)
Protein NP_568922.1 
BLAST NP_568922.1 
Orthologous [Ortholog page] LOC4328188 (osa)  LOC7491139 (ppo)  LOC11409211 (mtr)  LOC100267348 (vvi)  LOC100280887 (zma)  LOC100776337 (gma)  LOC100786227 (gma)  LOC101254971 (sly)  LOC103845470 (bra) 
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1  (predict for NP_568922.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_568922.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 6
Genes directly connected with PDX2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 AGL26 tRNA (cytidine(34)-2'-O)-methyltransferase [detail] 832746
6.4 PWD chloroplastidic phosphoglucan, water dikinase (ATGWD3) [detail] 832706
6.3 AT5G24060 Pentatricopeptide repeat (PPR) superfamily protein [detail] 832471
Coexpressed
gene list		 [Coexpressed gene list for PDX2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247641_at
247641_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247641_at
247641_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247641_at
247641_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836175      
Refseq ID (protein) NP_568922.1 


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