functional annotation |
Function |
electron transporter, putative (Protein of unknown function, DUF547) |
Plant GARDEN Plant GARDEN JBrowse
|
GO BP |
GO:2000652 [list] [network] regulation of secondary cell wall biogenesis
|
(51 genes)
|
IEA
|
|
GO:0043455 [list] [network] regulation of secondary metabolic process
|
(87 genes)
|
IEA
|
|
GO:0044550 [list] [network] secondary metabolite biosynthetic process
|
(171 genes)
|
IEA
|
|
GO:0045893 [list] [network] positive regulation of DNA-templated transcription
|
(272 genes)
|
IEA
|
|
GO:0006790 [list] [network] sulfur compound metabolic process
|
(420 genes)
|
IEA
|
|
GO:0000902 [list] [network] cell morphogenesis
|
(474 genes)
|
IEA
|
|
GO:0030154 [list] [network] cell differentiation
|
(1176 genes)
|
IEA
|
|
|
GO CC |
|
GO MF |
|
KEGG |
|
|
Protein |
NP_568927.2
|
BLAST |
NP_568927.2
|
Orthologous |
[Ortholog page]
LOC4334862 (osa)
LOC7463304 (ppo)
LOC25492425 (mtr)
LOC100793574 (gma)
LOC100809848 (gma)
LOC101267771 (sly)
LOC103845488 (bra)
LOC103856546 (bra)
LOC123087451 (tae)
LOC123109830 (tae)
LOC123114477 (tae)
LOC123123897 (tae)
LOC123180280 (tae)
LOC123189562 (tae)
LOC123399685 (hvu)
LOC123406348 (hvu)
|
Subcellular localization wolf |
chlo 5,
nucl 2,
pero 1,
cyto_nucl 1,
nucl_plas 1
|
(predict for NP_568927.2)
|
|
Subcellular localization TargetP |
chlo 4
|
(predict for NP_568927.2)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath00053 |
Ascorbate and aldarate metabolism |
2 |
|
ath01240 |
Biosynthesis of cofactors |
2 |
|
Genes directly connected with AT5G60720 on the network
coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
17.3 |
IRX3 |
Cellulose synthase family protein |
[detail] |
831608 |
16.8 |
IRX12 |
Laccase/Diphenol oxidase family protein |
[detail] |
818386 |
16.3 |
IRX1 |
cellulose synthase family protein |
[detail] |
827612 |
11.4 |
GulLO6 |
D-arabinono-1,4-lactone oxidase family protein |
[detail] |
819289 |
11.3 |
PGSIP3 |
plant glycogenin-like starch initiation protein 3 |
[detail] |
829469 |
11.3 |
NAC007 |
NAC 007 |
[detail] |
837780 |
8.9 |
AT5G07800 |
Flavin-binding monooxygenase family protein |
[detail] |
830673 |
7.9 |
AT3G14170 |
hypothetical protein (DUF936) |
[detail] |
820634 |
6.7 |
AT1G09440 |
Protein kinase superfamily protein |
[detail] |
837467 |
6.4 |
GulLO3 |
D-arabinono-1,4-lactone oxidase family protein |
[detail] |
831026 |
6.0 |
AT5G42210 |
Major facilitator superfamily protein |
[detail] |
834226 |
5.6 |
AT2G47670 |
Plant invertase/pectin methylesterase inhibitor superfamily protein |
[detail] |
819380 |
5.3 |
AT1G75090 |
DNA glycosylase superfamily protein |
[detail] |
843846 |
|
Coexpressed gene list |
[Coexpressed gene list for AT5G60720]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
247590_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
247590_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
247590_at
X axis is samples (xls file), and Y axis is log-expression.
|