[←][→] ath   AT5G60790 Gene
functional annotation
Function   ABC transporter family protein  
GO BP
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0016887 [list] [network] ATPase activity  (507 genes)  IEA  
GO:0022857 [list] [network] transmembrane transporter activity  (1151 genes)  ISS  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IBA  
KEGG
Protein NP_200887.1 
BLAST NP_200887.1 
Orthologous [Ortholog page] LOC4346343 (osa)  LOC4347924 (osa)  LOC7463311 (ppo)  LOC25487858 (mtr)  LOC25492406 (mtr)  LOC100251610 (vvi)  LOC100274199 (zma)  LOC100280013 (zma)  LOC100777592 (gma)  LOC100785099 (gma)  LOC100798721 (gma)  LOC100809491 (gma)  ABCF6 (sly)  ABCF2 (sly)  LOC103640881 (zma)  LOC103851055 (bra)  LOC103856545 (bra) 
Subcellular
localization
wolf
nucl 3,  mito 2,  chlo 2,  cyto_nucl 2,  cyto_mito 1  (predict for NP_200887.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_200887.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03013 RNA transport 3
ath03015 mRNA surveillance pathway 2
Genes directly connected with ABCF1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 ECT3 evolutionarily conserved C-terminal region 3 [detail] 836223
7.8 eIFiso4G1 MIF4G domain-containing protein / MA3 domain-containing protein [detail] 835897
7.2 NMD3 nonsense-mediated mRNA decay NMD3 family protein [detail] 814908
6.4 AT1G48040 Protein phosphatase 2C family protein [detail] 841222
6.3 AT1G18900 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838471
5.7 ERF1-1 eukaryotic release factor 1-1 [detail] 834839
5.7 AT3G02750 Protein phosphatase 2C family protein [detail] 820909
5.3 AT4G25670 stress response NST1-like protein [detail] 828672
Coexpressed
gene list		 [Coexpressed gene list for ABCF1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247593_at
247593_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247593_at
247593_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247593_at
247593_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836200      
Refseq ID (protein) NP_200887.1 


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