[←][→] ath   AT5G61000 Gene
functional annotation
Function   Replication factor-A protein 1-like protein  
GO BP
GO:0007004 [list] [network] telomere maintenance via telomerase  (11 genes)  IBA  
GO:0006268 [list] [network] DNA unwinding involved in DNA replication  (18 genes)  IBA  
GO:0000723 [list] [network] telomere maintenance  (36 genes)  IBA  
GO:0006289 [list] [network] nucleotide-excision repair  (46 genes)  IBA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IBA  
GO:0006261 [list] [network] DNA-dependent DNA replication  (94 genes)  IBA  
GO:0051321 [list] [network] meiotic cell cycle  (166 genes)  IBA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IBA  
GO CC
GO:0005662 [list] [network] DNA replication factor A complex  (8 genes)  IBA  
GO:0000784 [list] [network] nuclear chromosome, telomeric region  (23 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0043047 [list] [network] single-stranded telomeric DNA binding  (11 genes)  IBA  
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IBA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IBA  
GO:0004386 [list] [network] helicase activity  (157 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03030 [list] [network] DNA replication (50 genes)
ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath03430 [list] [network] Mismatch repair (39 genes)
ath03440 [list] [network] Homologous recombination (67 genes)
Protein NP_200908.1 
BLAST NP_200908.1 
Orthologous [Ortholog page] RPA70B (ath)  LOC4332052 (osa)  LOC25493890 (mtr)  LOC100255412 (vvi)  LOC100273584 (zma)  LOC100280726 (zma)  LOC100777091 (gma)  LOC100808364 (gma)  LOC101255870 (sly)  LOC103837365 (bra)  LOC103855752 (bra)  LOC103860562 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_200908.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_200908.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 3
ath03030 DNA replication 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
Genes directly connected with RPA70D on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
23.9 RPA70B RPA70-kDa subunit B [detail] 830696
20.7 BARD1 breast cancer associated RING 1 [detail] 839329
18.2 ABAP1 ARMADILLO BTB protein 1 [detail] 831145
17.4 AT3G14740 RING/FYVE/PHD zinc finger superfamily protein [detail] 820702
17.1 AT4G28310 microtubule-associated protein [detail] 828946
16.8 CYCA3;1 Cyclin A3;1 [detail] 834324
16.2 AT3G27640 Transducin/WD40 repeat-like superfamily protein [detail] 822386
13.9 ORC2 origin recognition complex second largest subunit 2 [detail] 818332
12.8 HMGB6 high-mobility group box 6 [detail] 832408
12.7 WEE1 WEE1-like kinase [detail] 839453
12.6 CDC45 cell division cycle 45 [detail] 822101
11.7 ATXR6 TRITHORAX-RELATED PROTEIN 6 [detail] 832503
11.5 AT5G54970 hypothetical protein [detail] 835588
11.3 ORC6 origin recognition complex protein 6 [detail] 839227
11.2 AT3G12170 Chaperone DnaJ-domain superfamily protein [detail] 820394
11.2 DEL1 DP-E2F-like 1 [detail] 823971
10.3 TSO2 Ferritin/ribonucleotide reductase-like family protein [detail] 822324
9.2 AT2G41450 N-acetyltransferase [detail] 818743
9.1 AT5G38690 Zinc-finger domain of monoamine-oxidase A repressor R1 protein [detail] 833859
6.8 CTF7 protein CTF7 [detail] 829267
Coexpressed
gene list		 [Coexpressed gene list for RPA70D]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247606_at
247606_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247606_at
247606_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247606_at
247606_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836221      
Refseq ID (protein) NP_200908.1 


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