[←][→] ath   At5g61380 Gene
functional annotation
Function   CCT motif -containing response regulator protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010031 [list] [network] circumnutation  (6 genes)  IMP  
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (70 genes)  IEA  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IEP TAS  
GO:0006351 [list] [network] DNA-templated transcription  (159 genes)  TAS  
GO:0010629 [list] [network] negative regulation of gene expression  (396 genes)  IDA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  ISS TAS  
GO:0010468 [list] [network] regulation of gene expression  (2177 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM TAS  
GO MF
GO:0000156 [list] [network] phosphorelay response regulator activity  (33 genes)  ISS  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04712 [list] [network] Circadian rhythm - plant (39 genes)
Protein NP_200946.1 
BLAST NP_200946.1 
Orthologous [Ortholog page] LOC4330000 (osa)  LOC18105787 (ppo)  LOC25488813 (mtr)  LOC25493836 (mtr)  TOC1 (gma)  LOC100786522 (gma)  LOC100799728 (gma)  LOC100813917 (gma)  LOC101259163 (sly)  LOC101259425 (sly)  LOC103837378 (bra)  LOC103860589 (bra)  LOC123127760 (tae)  LOC123137489 (tae)  LOC123144843 (tae)  LOC123401310 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_200946.1)
Subcellular
localization
TargetP
other 9  (predict for NP_200946.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
Genes directly connected with TOC1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.5 AT4G33980 uncharacterized protein [detail] 829544
10.6 COL9 CONSTANS-like 9 [detail] 819956
10.4 ELF3 hydroxyproline-rich glycoprotein family protein [detail] 817134
10.2 ELF4 EARLY FLOWERING-like protein (DUF1313) [detail] 818596
9.6 PCL1 Homeodomain-like superfamily protein [detail] 823817
7.7 BBX13 B-box type zinc finger protein with CCT domain-containing protein [detail] 839698
7.3 ACA8 autoinhibited Ca2+ -ATPase [detail] 835815
7.0 BET9 bromodomain and extraterminal domain protein 9 [detail] 831277
6.8 PBL1 PBS1-like 1 [detail] 824711
Coexpressed
gene list		 [Coexpressed gene list for TOC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247525_at
247525_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247525_at
247525_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247525_at
247525_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836259      
Refseq ID (protein) NP_200946.1 


The preparation time of this page was 0.1 [sec].