[←][→] ath   AT5G61460 Gene
functional annotation
Function   P-loop containing nucleoside triphosphate hydrolases superfamily protein  
GO BP
GO:0010165 [list] [network] response to X-ray  (8 genes)  IMP  
GO:0007062 [list] [network] sister chromatid cohesion  (35 genes)  IMP  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IMP  
GO:0006302 [list] [network] double-strand break repair  (108 genes)  IMP  
GO CC
GO:0030915 [list] [network] Smc5-Smc6 complex  (8 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_200954.1 
BLAST NP_200954.1 
Orthologous [Ortholog page] SMC6A (ath)  LOC9267891 (osa)  LOC11412113 (mtr)  LOC25491907 (mtr)  LOC100249449 (vvi)  LOC100383441 (zma)  LOC100816916 (gma)  LOC101253591 (sly)  LOC103850664 (bra)  LOC103860596 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 3,  mito 1,  nucl 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_200954.1)
Subcellular
localization
TargetP
chlo 3,  other 3  (predict for NP_200954.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 5
ath03440 Homologous recombination 3
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
Genes directly connected with MIM on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 AT5G63960 DNA polymerase delta subunit 1 [detail] 836517
9.3 TIL1 DNA polymerase epsilon catalytic subunit [detail] 837346
9.2 MEI1 transcription coactivator [detail] 844068
8.3 SMC6A structural maintenance of chromosomes 6A [detail] 830659
7.8 MCM8 minichromosome maintenance 8 [detail] 820123
6.3 ARP apurinic endonuclease-redox protein [detail] 818744
5.9 MMH-1 MUTM homolog-1 [detail] 841681
5.7 BIN4 double-stranded DNA binding protein [detail] 832534
4.6 AT4G38780 pre-mRNA-processing-splicing factor-like protein [detail] 830033
Coexpressed
gene list		 [Coexpressed gene list for MIM]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247528_at
247528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247528_at
247528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247528_at
247528_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836267      
Refseq ID (protein) NP_200954.1 


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