[←][→] ath   At5g61460 Gene
functional annotation
Function   P-loop containing nucleoside triphosphate hydrolases superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010165 [list] [network] response to X-ray  (4 genes)  IMP  
GO:0007062 [list] [network] sister chromatid cohesion  (30 genes)  IMP  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (40 genes)  IMP  
GO:0006302 [list] [network] double-strand break repair  (62 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (11 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (115 genes)  IEA  
KEGG
Protein NP_200954.1 
BLAST NP_200954.1 
Orthologous [Ortholog page] SMC6A (ath)  LOC7465500 (ppo)  LOC9267891 (osa)  LOC11412113 (mtr)  LOC25491907 (mtr)  LOC100816916 (gma)  LOC101253591 (sly)  LOC103850664 (bra)  LOC103860596 (bra)  LOC123103308 (tae)  LOC123111497 (tae)  LOC123120688 (tae)  LOC123135715 (tae)  LOC123143277 (tae)  LOC123399577 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 3,  mito 1,  nucl 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_200954.1)
Subcellular
localization
TargetP
chlo 3,  other 3  (predict for NP_200954.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03030 DNA replication 4
ath03410 Base excision repair 3
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
Genes directly connected with MIM on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.9 TIL1 DNA polymerase epsilon catalytic subunit [detail] 837346
9.6 AT5G63960 DNA polymerase delta subunit 1 [detail] 836517
8.9 SMC6A structural maintenance of chromosomes 6A [detail] 830659
8.5 MEI1 transcription coactivator [detail] 844068
8.5 MCM8 minichromosome maintenance 8 [detail] 820123
7.9 ORC4 origin recognition complex subunit 4 [detail] 814641
7.2 AT5G26680 5'-3' exonuclease family protein [detail] 832721
5.4 BIN4 double-stranded DNA binding protein [detail] 832534
4.7 AT4G38780 pre-mRNA-processing-splicing factor-like protein [detail] 830033
Coexpressed
gene list		 [Coexpressed gene list for MIM]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247528_at
247528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247528_at
247528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247528_at
247528_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836267      
Refseq ID (protein) NP_200954.1 


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