[←][→] ath   At5g61560 Gene
functional annotation
Function   U-box domain-containing protein kinase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010200 [list] [network] response to chitin  (304 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO:0002376 [list] [network] immune system process  (453 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (639 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IEA  
GO:0014070 [list] [network] response to organic cyclic compound  (807 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0009620 [list] [network] response to fungus  (999 genes)  IEA  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEA  
GO:1901701 [list] [network] cellular response to oxygen-containing compound  (1115 genes)  IEA  
GO:0071310 [list] [network] cellular response to organic substance  (1485 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO:0044281 [list] [network] small molecule metabolic process  (2411 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IEA  
GO:0004672 [list] [network] protein kinase activity  (768 genes)  IEA  
KEGG
Protein NP_001190589.1  NP_001330716.1  NP_001330717.1  NP_001330718.1  NP_200964.2 
BLAST NP_001190589.1  NP_001330716.1  NP_001330717.1  NP_001330718.1  NP_200964.2 
Orthologous [Ortholog page] AT4G25160 (ath)  AT5G51270 (ath)  AT5G61550 (ath)  LOC4340071 (osa)  LOC11420306 (mtr)  LOC11422389 (mtr)  LOC18098401 (ppo)  LOC100801699 (gma)  LOC100818628 (gma)  LOC101256881 (sly)  LOC101265211 (sly)  LOC103844387 (bra)  LOC103844389 (bra)  LOC103844482 (bra)  LOC103852158 (bra)  LOC103854953 (bra)  LOC103854954 (bra)  LOC103860604 (bra)  LOC103861119 (bra)  LOC103861533 (bra)  LOC103862938 (bra)  LOC117128027 (bra)  LOC123087943 (tae)  LOC123087944 (tae)  LOC123152120 (tae)  LOC123169178 (tae)  LOC123410245 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  mito 1,  pero 1,  cysk 1,  chlo_mito 1  (predict for NP_001190589.1)
nucl 6,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001330716.1)
nucl 6,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001330717.1)
cyto 4,  nucl 3,  chlo 1,  mito 1,  pero 1,  cysk 1,  chlo_mito 1  (predict for NP_001330718.1)
cyto 4,  nucl 3,  chlo 1,  mito 1,  pero 1,  cysk 1,  chlo_mito 1  (predict for NP_200964.2)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for NP_001190589.1)
other 9  (predict for NP_001330716.1)
other 9  (predict for NP_001330717.1)
other 4,  chlo 3  (predict for NP_001330718.1)
other 4,  chlo 3  (predict for NP_200964.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 5
ath04075 Plant hormone signal transduction 4
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT5G61560 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.5 AMT2 ammonium transporter 2 [detail] 818409
5.4 SD2-5 S-domain-2 5 [detail] 829365
5.0 FLS2 Leucine-rich receptor-like protein kinase family protein [detail] 834676
4.1 AT4G23030 MATE efflux family protein [detail] 828402
Coexpressed
gene list		 [Coexpressed gene list for AT5G61560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247532_at
247532_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247532_at
247532_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247532_at
247532_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836277      
Refseq ID (protein) NP_001190589.1 
NP_001330716.1 
NP_001330717.1 
NP_001330718.1 
NP_200964.2 


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