[][] ath   AT5G61890 Gene
functional annotation
Function   Integrase-type DNA-binding superfamily protein
GO BP
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IEP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_200995.1 
BLAST NP_200995.1 
Orthologous [Ortholog page] AT2G33710 (ath)AT5G07310 (ath)Rap2.6L (ath)ERF110 (ath)RAP2.6 (ath)LOC4329612 (osa)LOC4332792 (osa)LOC4335707 (osa)LOC4349881 (osa)LOC4351606 (osa)LOC7468768 (ppo)LOC7469237 (ppo)LOC7482822 (ppo)LOC7484341 (ppo)LOC9267785 (osa)LOC9268751 (osa)LOC11405418 (mtr)LOC11421690 (mtr)LOC11434091 (mtr)LOC11438832 (mtr)LOC11443305 (mtr)LOC25495900 (mtr)LOC25496160 (mtr)LOC100245655 (vvi)LOC100250476 (vvi)LOC100262406 (vvi)LOC100264647 (vvi)LOC100266913 (vvi)LOC100275504 (zma)LOC100280929 (zma)LOC100500531 (gma)LOC100777915 (gma)LOC100787091 (gma)LOC100793215 (gma)LOC100793410 (gma)LOC100796247 (gma)LOC100796480 (gma)LOC100796624 (gma)LOC100798671 (gma)LOC100799190 (gma)LOC100802242 (gma)LOC100804843 (gma)LOC100806383 (gma)LOC100816370 (gma)LOC100817436 (gma)ERF84 (sly)LOC101251748 (sly)ERF-J2 (sly)ERF-J1 (sly)ERF-D1 (sly)ERF-D9 (sly)ERF-D2 (sly)ERF-D8 (sly)ERF-D7 (sly)LOC103628663 (zma)LOC103630419 (zma)LOC103642291 (zma)LOC103642747 (zma)LOC103645181 (zma)LOC103646542 (zma)LOC103846580 (bra)LOC103847068 (bra)LOC103850650 (bra)LOC103850861 (bra)LOC103854964 (bra)LOC103856012 (bra)LOC103856843 (bra)LOC103865292 (bra)LOC103867515 (bra)LOC103873458 (bra)LOC107278754 (osa)LOC112938623 (osa)
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_200995.1)
Subcellular
localization
TargetP
other 9  (predict for NP_200995.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
Genes directly connected with AT5G61890 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.5 AT5G07310 Integrase-type DNA-binding superfamily protein [detail] 830622
5.8 PRX52 Peroxidase superfamily protein [detail] 830416
5.2 WRKY28 WRKY DNA-binding protein 28 [detail] 827542
4.1 NRT2.6 high affinity nitrate transporter 2.6 [detail] 823641
4.0 AT3G47380 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 823892
Coexpressed
gene list
[Coexpressed gene list for AT5G61890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247492_at
247492_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247492_at
247492_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
247492_at
247492_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 836310    
Refseq ID (protein) NP_200995.1 


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