[←][→] ath   AT5G61980 Gene
functional annotation
Function   ARF-GAP domain 1  
GO BP
GO:0048768 [list] [network] root hair cell tip growth  (23 genes)  IMP  
GO:0007010 [list] [network] cytoskeleton organization  (238 genes)  IMP  
GO CC
GO:0030139 [list] [network] endocytic vesicle  (13 genes)  IDA  
GO:0035618 [list] [network] root hair  (13 genes)  IDA  
GO:0005768 [list] [network] endosome  (424 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO MF
GO:0005096 [list] [network] GTPase activator activity  (59 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_201004.2 
BLAST NP_201004.2 
Orthologous [Ortholog page] SFC (ath)  LOC4346168 (osa)  LOC4347541 (osa)  LOC7456644 (ppo)  LOC11441813 (mtr)  LOC100259206 (vvi)  LOC100383138 (zma)  LOC100789134 (gma)  LOC100798227 (gma)  LOC101246911 (sly)  LOC103632959 (zma)  LOC103653236 (zma)  LOC103846583 (bra)  LOC103854969 (bra)  LOC103856010 (bra)  LOC103874635 (bra)  LOC104647411 (sly) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_201004.2)
Subcellular
localization
TargetP
other 7  (predict for NP_201004.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
ath04144 Endocytosis 2
Genes directly connected with AGD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 PIP5K6 Phosphatidylinositol-4-phosphate 5-kinase family protein [detail] 819987
6.0 XIB myosin XI B [detail] 839246
5.6 AT1G04700 PB1 domain-containing protein tyrosine kinase [detail] 839437
5.5 NPG1 tetratricopeptide repeat (TPR)-containing protein [detail] 818906
Coexpressed
gene list		 [Coexpressed gene list for AGD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247503_at
247503_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247503_at
247503_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247503_at
247503_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836319      
Refseq ID (protein) NP_201004.2 


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