[←][→] ath   AT5G62290 Gene
functional annotation
Function   nucleotide-sensitive chloride conductance regulator (ICln) family protein  
GO BP
GO:0006884 [list] [network] cell volume homeostasis  (3 genes)  IEA  
GO:0006821 [list] [network] chloride transport  (7 genes)  IEA  
GO:0000387 [list] [network] spliceosomal snRNP assembly  (17 genes)  IEA  
GO CC
GO:0034709 [list] [network] methylosome  (1 genes)  IEA  
GO:0034715 [list] [network] pICln-Sm protein complex  (4 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
KEGG ath03013 [list] [network] RNA transport (171 genes)
Protein NP_001119478.1  NP_201035.1 
BLAST NP_001119478.1  NP_201035.1 
Orthologous [Ortholog page] LOC4332256 (osa)  LOC4348184 (osa)  LOC7481827 (ppo)  LOC11433399 (mtr)  LOC100192551 (zma)  LOC100248089 (vvi)  LOC100273863 (zma)  LOC100779490 (gma)  LOC100790816 (gma)  LOC101250971 (sly)  LOC103854998 (bra)  LOC103874665 (bra)  LOC107279226 (osa) 
Subcellular
localization
wolf
nucl 5,  nucl_plas 3,  cyto 1,  chlo 1,  extr 1,  vacu 1,  pero 1,  cyto_E.R. 1  (predict for NP_001119478.1)
nucl 5,  nucl_plas 3,  cyto 1,  chlo 1,  extr 1,  vacu 1,  pero 1,  cyto_E.R. 1  (predict for NP_201035.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001119478.1)
other 9  (predict for NP_201035.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03008 Ribosome biogenesis in eukaryotes 2
ath03018 RNA degradation 2
ath03013 RNA transport 2
Genes directly connected with AT5G62290 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 AT2G19540 Transducin family protein / WD-40 repeat family protein [detail] 816473
9.0 AT5G64680 mediator-associated protein [detail] 836589
8.1 AT5G66860 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [detail] 836820
7.6 AT2G43770 Transducin/WD40 repeat-like superfamily protein [detail] 818980
7.6 AT2G46230 PIN domain-like family protein [detail] 819231
5.4 RAD52-1 cobalt ion binding protein [detail] 843472
Coexpressed
gene list		 [Coexpressed gene list for AT5G62290]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247449_at
247449_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247449_at
247449_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247449_at
247449_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836350      
Refseq ID (protein) NP_001119478.1 
NP_201035.1 


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