[←][→] ath   AT5G62430 Gene
functional annotation
Function   cycling DOF factor 1  
GO BP
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (36 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IDA  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA IPI ISM  
GO MF
GO:0001227 [list] [network] DNA-binding transcription repressor activity, RNA polymerase II-specific  (2 genes)  IDA IMP  
GO:0000978 [list] [network] RNA polymerase II proximal promoter sequence-specific DNA binding  (34 genes)  IDA  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IBA IDA ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IBA IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04712 [list] [network] Circadian rhythm - plant (36 genes)
Protein NP_201049.3 
BLAST NP_201049.3 
Orthologous [Ortholog page] LOC778113 (gma)  LOC778120 (gma)  CDF3 (ath)  CDF2 (ath)  LOC4331765 (osa)  LOC4344326 (osa)  LOC4348585 (osa)  LOC7463038 (ppo)  LOC7495982 (ppo)  LOC11410541 (mtr)  LOC11412800 (mtr)  LOC11414470 (mtr)  LOC11416079 (mtr)  LOC11427755 (mtr)  LOC11445690 (mtr)  LOC25490407 (mtr)  LOC100193013 (zma)  LOC100254372 (vvi)  LOC100257057 (vvi)  LOC100265355 (vvi)  LOC100275567 (zma)  LOC100276261 (zma)  LOC100775201 (gma)  LOC100775675 (gma)  LOC100784308 (gma)  LOC100788246 (gma)  LOC100788247 (gma)  LOC100798021 (gma)  LOC100803454 (gma)  LOC100807731 (gma)  LOC100813315 (gma)  LOC100817354 (gma)  LOC101243956 (sly)  LOC101248009 (sly)  LOC101252243 (sly)  Dof22 (sly)  LOC101262001 (sly)  LOC103850147 (bra)  LOC103855006 (bra)  LOC103863905 (bra)  LOC103873236 (bra)  LOC103874677 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto 1,  extr 1,  golg 1  (predict for NP_201049.3)
Subcellular
localization
TargetP
other 9  (predict for NP_201049.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
Genes directly connected with CDF1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 CDF3 cycling DOF factor 3 [detail] 823904
8.7 AT3G12320 hypothetical protein [detail] 820411
7.7 AT5G64170 dentin sialophosphoprotein-like protein [detail] 836538
5.2 MSL5 mechanosensitive channel of small conductance-like 5 [detail] 820710
5.2 SNZ Integrase-type DNA-binding superfamily protein [detail] 818510
4.5 AT1G48745 hypothetical protein [detail] 5007786
Coexpressed
gene list		 [Coexpressed gene list for CDF1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247452_at
247452_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247452_at
247452_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247452_at
247452_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836364      
Refseq ID (protein) NP_201049.3 


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