[←][→] ath   AT5G62460 Gene
functional annotation
Function   RING/FYVE/PHD zinc finger superfamily protein  
GO BP
GO:0071472 [list] [network] cellular response to salt stress  (40 genes)  IMP  
GO:0071470 [list] [network] cellular response to osmotic stress  (51 genes)  IMP  
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_001330073.1  NP_001330074.1  NP_568953.1 
BLAST NP_001330073.1  NP_001330074.1  NP_568953.1 
Orthologous [Ortholog page] LOC103855008 (bra) 
Subcellular
localization
wolf
nucl 4,  nucl_plas 3,  chlo 2,  cyto 1,  plas 1,  chlo_mito 1  (predict for NP_001330073.1)
nucl 4,  chlo 1,  cyto 1,  mito 1,  plas 1,  extr 1,  golg 1,  golg_plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001330074.1)
nucl 4,  nucl_plas 3,  chlo 2,  cyto 1,  plas 1,  chlo_mito 1  (predict for NP_568953.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for NP_001330073.1)
other 7,  chlo 4  (predict for NP_001330074.1)
chlo 6,  other 5  (predict for NP_568953.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with AT5G62460 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 SYP21 syntaxin of plants 21 [detail] 831546
5.8 LSD1 LSD1 zinc finger family protein [detail] 827786
5.8 EXT-like hydroxyproline-rich glycoprotein family protein [detail] 828782
5.5 AT5G52580 RabGAP/TBC domain-containing protein [detail] 835335
5.1 AT5G19070 SNARE associated Golgi protein family [detail] 832026
Coexpressed
gene list		 [Coexpressed gene list for AT5G62460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247438_at
247438_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247438_at
247438_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247438_at
247438_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836366      
Refseq ID (protein) NP_001330073.1 
NP_001330074.1 
NP_568953.1 


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