[←][→] ath   At5g63920 Gene
functional annotation
Function   topoisomerase 3alpha    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (6 genes)  IMP  
GO:0007059 [list] [network] chromosome segregation  (77 genes)  IMP  
GO:0000278 [list] [network] mitotic cell cycle  (86 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (203 genes)  IMP  
GO:0051321 [list] [network] meiotic cell cycle  (276 genes)  IMP  
GO CC
GO:0005694 [list] [network] chromosome  (214 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03440 [list] [network] Homologous recombination (60 genes)
Protein NP_201197.1 
BLAST NP_201197.1 
Orthologous [Ortholog page] LOC7479156 (ppo)  LOC9269718 (osa)  LOC11428648 (mtr)  LOC100818971 (gma)  LOC101262415 (sly)  LOC103855218 (bra)  LOC123084825 (tae)  LOC123093258 (tae)  LOC123098524 (tae)  LOC123449524 (hvu) 
Subcellular
localization
wolf
chlo 5,  nucl 3,  mito 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_201197.1)
Subcellular
localization
TargetP
mito 4,  chlo 3  (predict for NP_201197.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03030 DNA replication 3
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
Genes directly connected with TOP3A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.3 AT4G16970 Protein kinase superfamily protein [detail] 827405
8.2 AT5G63960 DNA polymerase delta subunit 1 [detail] 836517
8.1 CTF18 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 839431
6.9 AT1G05950 uncharacterized protein [detail] 837105
6.3 MSH3 homolog of DNA mismatch repair protein MSH3 [detail] 828659
6.3 AT1G79890 RAD3-like DNA-binding helicase protein [detail] 844328
5.4 VLN1 villin-like 1 [detail] 817539
5.4 BIO1 adenosylmethionine-8-amino-7-oxononanoate transaminase [detail] 835863
4.7 AGO6 Argonaute family protein [detail] 817856
4.2 AT1G16220 Protein phosphatase 2C family protein [detail] 838190
Coexpressed
gene list		 [Coexpressed gene list for TOP3A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247301_at
247301_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247301_at
247301_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247301_at
247301_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836513      
Refseq ID (protein) NP_201197.1 


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