ATTED-II : GeneID search result

[←][→] ath AT5G65440 Gene

functional annotation

Function

transmembrane protein

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0005739 [list] [network] mitochondrion	(4405 genes)	ISM
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

KEGG

Protein

NP_001119504.1 NP_001190622.1 NP_001332292.1 NP_001332293.1 NP_001332294.1 NP_001332295.1 NP_001332296.1 NP_001332297.1 NP_201347.2

BLAST

NP_001119504.1 NP_001190622.1 NP_001332292.1 NP_001332293.1 NP_001332294.1 NP_001332295.1 NP_001332296.1 NP_001332297.1 NP_201347.2

Orthologous

[Ortholog page] LOC103873977 (bra)

Subcellular
localization
wolf

nucl 4, cyto 2, cysk_nucl 2, nucl_plas 2	(predict for NP_001119504.1)
nucl 4, cyto 4, cyto_nucl 4	(predict for NP_001190622.1)
nucl 4, cyto 1, vacu 1, golg 1, chlo 1, E.R. 1, golg_plas 1, cyto_pero 1, cyto_plas 1	(predict for NP_001332292.1)
nucl 4, cyto 3, chlo 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_001332293.1)
nucl 4, cyto 4, cyto_nucl 4	(predict for NP_001332294.1)
nucl 4, cyto 3, chlo 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_001332295.1)
nucl 4, cyto 3, chlo 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_001332296.1)
nucl 4, cyto 4, cyto_nucl 4	(predict for NP_001332297.1)
nucl 4, cyto 4, cyto_nucl 4	(predict for NP_201347.2)

Subcellular
localization
TargetP

other 6, chlo 3	(predict for NP_001119504.1)
other 6, chlo 4	(predict for NP_001190622.1)
other 6, chlo 4	(predict for NP_001332292.1)
other 6, chlo 4	(predict for NP_001332293.1)
other 6, chlo 3	(predict for NP_001332294.1)
other 6, chlo 4	(predict for NP_001332295.1)
other 6, chlo 4	(predict for NP_001332296.1)
other 6, chlo 3	(predict for NP_001332297.1)
other 6, chlo 3	(predict for NP_201347.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G65440 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.9	GAUT4	galacturonosyltransferase 4	[detail]	834829
5.7	AT1G22060	sporulation-specific protein	[detail]	838811
5.7	DME	HhH-GPD base excision DNA repair family protein	[detail]	830335
4.9	AT3G06450	HCO3- transporter family	[detail]	819821

Coexpressed
gene list

[Coexpressed gene list for AT5G65440]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247183_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247183_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247183_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	836669
Refseq ID (protein)	NP_001119504.1
	NP_001190622.1
	NP_001332292.1
	NP_001332293.1
	NP_001332294.1
	NP_001332295.1
	NP_001332296.1
	NP_001332297.1
	NP_201347.2

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