[←][→] ath   At5g65560 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein      
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_001331859.1  NP_001331860.1  NP_201359.1 
BLAST NP_001331859.1  NP_001331860.1  NP_201359.1 
Orthologous [Ortholog page] AT1G77340 (ath)  LOC4341903 (osa)  LOC11408567 (mtr)  LOC100797910 (gma)  LOC101247676 (sly)  LOC103855010 (bra)  LOC103873993 (bra)  LOC112323272 (ppo)  LOC123148833 (tae)  LOC123159070 (tae)  LOC123170402 (tae)  LOC123409173 (hvu) 
Subcellular
localization
wolf
chlo 6,  extr 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_001331859.1)
chlo 6,  extr 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_001331860.1)
chlo 6,  extr 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_201359.1)
Subcellular
localization
TargetP
mito 4,  chlo 4  (predict for NP_001331859.1)
mito 4,  chlo 4  (predict for NP_001331860.1)
mito 4,  chlo 4  (predict for NP_201359.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G65560 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.6 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838903
7.7 AT1G79540 Pentatricopeptide repeat (PPR) superfamily protein [detail] 844292
6.7 AT5G61990 Pentatricopeptide repeat (PPR) superfamily protein [detail] 836320
6.2 AT1G66345 Pentatricopeptide repeat (PPR) superfamily protein [detail] 842952
5.9 AT2G43250 uncharacterized protein [detail] 818926
5.7 AT3G44690 uncharacterized protein [detail] 823595
Coexpressed
gene list		 [Coexpressed gene list for AT5G65560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247141_at
247141_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247141_at
247141_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247141_at
247141_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836682      
Refseq ID (protein) NP_001331859.1 
NP_001331860.1 
NP_201359.1 


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