| functional annotation |
| Function |
calcium-dependent protein kinase 28 |
|
| GO BP |
|
GO:2000032 [list] [network] regulation of secondary shoot formation
|
(11 genes)
|
IMP
|
 |
|
GO:1900425 [list] [network] negative regulation of defense response to bacterium
|
(17 genes)
|
IDA
|
|
|
GO:0018105 [list] [network] peptidyl-serine phosphorylation
|
(84 genes)
|
IBA
|
|
|
GO:0046777 [list] [network] protein autophosphorylation
|
(173 genes)
|
IBA
|
|
|
GO:0040008 [list] [network] regulation of growth
|
(315 genes)
|
IEA
|
|
|
GO:0035556 [list] [network] intracellular signal transduction
|
(517 genes)
|
IBA
|
|
|
GO:0006468 [list] [network] protein phosphorylation
|
(921 genes)
|
IDA
|
|
|
GO:0006952 [list] [network] defense response
|
(1420 genes)
|
IEA
|
|
|
GO:0007275 [list] [network] multicellular organism development
|
(2714 genes)
|
IEA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0004683 [list] [network] calmodulin-dependent protein kinase activity
|
(38 genes)
|
IBA
|
|
|
GO:0009931 [list] [network] calcium-dependent protein serine/threonine kinase activity
|
(38 genes)
|
IBA
|
|
|
GO:0004722 [list] [network] protein serine/threonine phosphatase activity
|
(113 genes)
|
IDA
|
|
|
GO:0005516 [list] [network] calmodulin binding
|
(182 genes)
|
IBA
|
|
|
GO:0005509 [list] [network] calcium ion binding
|
(242 genes)
|
IEA
|
|
|
GO:0004674 [list] [network] protein serine/threonine kinase activity
|
(801 genes)
|
IDA
|
|
|
GO:0005524 [list] [network] ATP binding
|
(2003 genes)
|
IEA
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
ath04626 [list] [network] Plant-pathogen interaction (170 genes) |
 |
| Protein |
NP_001078806.1
NP_001119508.1
NP_001331199.1
NP_001331200.1
NP_201422.1
NP_851280.1
|
| BLAST |
NP_001078806.1
NP_001119508.1
NP_001331199.1
NP_001331200.1
NP_201422.1
NP_851280.1
|
| Orthologous |
[Ortholog page]
CPK16 (ath)
CPK18 (ath)
LOC4328155 (osa)
LOC4343002 (osa)
LOC11434917 (mtr)
LOC100217278 (zma)
LOC100248850 (vvi)
LOC100284681 (zma)
LOC100316879 (sly)
LOC100798941 (gma)
LOC100805954 (gma)
LOC100817249 (gma)
LOC101260391 (sly)
LOC103829620 (bra)
LOC103837675 (bra)
LOC103845907 (bra)
LOC103862455 (bra)
LOC103874097 (bra)
|
Subcellular
localization
wolf |
|
chlo 6,
mito 3
|
(predict for NP_001078806.1)
|
|
chlo 8,
mito 2
|
(predict for NP_001119508.1)
|
|
chlo 7,
mito 2,
cyto_mito 1
|
(predict for NP_001331199.1)
|
|
chlo 8,
mito 2
|
(predict for NP_001331200.1)
|
|
chlo 8,
mito 1,
cyto_mito 1
|
(predict for NP_201422.1)
|
|
chlo 8,
mito 1,
cyto_mito 1
|
(predict for NP_851280.1)
|
|
Subcellular
localization
TargetP |
|
chlo 7,
mito 4
|
(predict for NP_001078806.1)
|
|
chlo 7,
mito 4
|
(predict for NP_001119508.1)
|
|
chlo 7,
mito 4
|
(predict for NP_001331199.1)
|
|
chlo 7,
mito 4
|
(predict for NP_001331200.1)
|
|
chlo 7,
mito 4
|
(predict for NP_201422.1)
|
|
chlo 7,
mito 4
|
(predict for NP_851280.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04626 |
Plant-pathogen interaction |
5 |
 |
Genes directly connected with CPK28 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 12.6 |
ACA1 |
autoinhibited Ca2+-ATPase 1 |
[detail] |
839670 |
| 9.9 |
NUDT7 |
MutT/nudix family protein |
[detail] |
826884 |
| 9.5 |
XLG2 |
extra-large GTP-binding protein 2 |
[detail] |
829589 |
| 9.4 |
CAD1 |
MAC/Perforin domain-containing protein |
[detail] |
839846 |
| 9.1 |
CPK32 |
calcium-dependent protein kinase 32 |
[detail] |
824920 |
| 8.7 |
S6K2 |
serine/threonine protein kinase 2 |
[detail] |
820019 |
| 8.5 |
NAK |
Protein kinase superfamily protein |
[detail] |
831880 |
| 8.2 |
AT5G62570 |
Calmodulin binding protein-like protein |
[detail] |
836377 |
| 7.9 |
AT5G22690 |
Disease resistance protein (TIR-NBS-LRR class) family |
[detail] |
832332 |
| 7.7 |
SCL13 |
SCARECROW-like 13 |
[detail] |
827435 |
| 7.5 |
FC1 |
ferrochelatase 1 |
[detail] |
832672 |
| 6.8 |
PTI1-4 |
Protein kinase superfamily protein |
[detail] |
819320 |
| 6.3 |
RBOHD |
respiratory burst oxidase homologue D |
[detail] |
834842 |
| 6.3 |
AT4G02200 |
Drought-responsive family protein |
[detail] |
827516 |
| 6.2 |
MUB4 |
membrane-anchored ubiquitin-fold protein 4 precursor |
[detail] |
822315 |
| 5.3 |
bZIP68 |
basic region/leucine zipper transcription factor 68 |
[detail] |
840107 |
| 4.5 |
AT3G59310 |
solute carrier family 35 protein (DUF914) |
[detail] |
825100 |
|
Coexpressed
gene list |
[Coexpressed gene list for CPK28]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
247137_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
247137_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
247137_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT5G66210 Gene
