[][] ath   AT5G67100 Gene
functional annotation
Function   DNA-directed DNA polymerase
GO BP
GO:1902975 [list] [network] mitotic DNA replication initiation  (3 genes)  IBA  
GO:0006273 [list] [network] lagging strand elongation  (4 genes)  IBA  
GO:0006272 [list] [network] leading strand elongation  (5 genes)  IBA  
GO:0071897 [list] [network] DNA biosynthetic process  (23 genes)  TAS  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  NAS  
GO:0009965 [list] [network] leaf morphogenesis  (96 genes)  IMP  
GO CC
GO:0005658 [list] [network] alpha DNA polymerase:primase complex  (3 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0019103 [list] [network] pyrimidine nucleotide binding  (1 genes)  IBA  
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (16 genes)  IBA TAS  
GO:0003688 [list] [network] DNA replication origin binding  (17 genes)  IBA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IBA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (81 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (126 genes)  IBA  
GO:0001882 [list] [network] nucleoside binding  (252 genes)  IEA  
GO:0017076 [list] [network] purine nucleotide binding  (2332 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03030 [list] [network] DNA replication (50 genes)
Protein NP_001331725.1  NP_201511.2 
BLAST NP_001331725.1  NP_201511.2 
Orthologous [Ortholog page] LOC4325052 (osa)LOC7483107 (ppo)LOC11410926 (mtr)LOC100194009 (zma)LOC100250805 (vvi)LOC100798779 (gma)DNApolalpha (sly)LOC103829539 (bra)LOC103853956 (bra)
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001331725.1)
nucl 8,  cyto 1  (predict for NP_201511.2)
Subcellular
localization
TargetP
other 5  (predict for NP_001331725.1)
other 5  (predict for NP_201511.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
ath03440 Homologous recombination 2
Genes directly connected with ICU2 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
18.1 MCM4 Minichromosome maintenance (MCM2/3/5) family protein [detail] 816142
17.4 MCM2 minichromosome maintenance (MCM2/3/5) family protein [detail] 841056
16.6 MCM5 Minichromosome maintenance (MCM2/3/5) family protein [detail] 815415
15.2 CTF18 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 839431
14.5 TIL1 DNA polymerase epsilon catalytic subunit [detail] 837346
14.3 ORC3 origin recognition complex subunit 3 [detail] 831530
13.7 MET1 methyltransferase 1 [detail] 834975
13.5 AT1G75150 DNA ligase-like protein [detail] 843852
12.4 AT3G02820 zinc knuckle (CCHC-type) family protein [detail] 821018
12.4 AT1G26330 DNA binding protein [detail] 839175
9.3 BRCA2(IV) BREAST CANCER 2 like 2A [detail] 828230
9.1 CHR17 chromatin remodeling factor17 [detail] 831980
8.2 TOP3A topoisomerase 3alpha [detail] 836513
8.0 ATX1 homologue of trithorax [detail] 817721
7.4 MSH2 MUTS homolog 2 [detail] 821383
Coexpressed
gene list
[Coexpressed gene list for ICU2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247028_at
247028_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247028_at
247028_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
247028_at
247028_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 836845    
Refseq ID (protein) NP_001331725.1 
NP_201511.2 


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