ATTED-II : GeneID search result

[←][→] ath AT5G67110 Gene

functional annotation

Function

basic helix-loop-helix (bHLH) DNA-binding superfamily protein

GO BP

GO:0010047 [list] [network] fruit dehiscence

(11 genes)

IMP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA IDA ISM ISS

GO MF

GO:0046983 [list] [network] protein dimerization activity	(570 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	IMP ISS
GO:0003677 [list] [network] DNA binding	(2280 genes)	IEA

KEGG

Protein

NP_001078810.1 NP_001078811.1 NP_201512.1

BLAST

NP_001078810.1 NP_001078811.1 NP_201512.1

Orthologous

[Ortholog page] SPT (ath) LOC4337015 (osa) LOC4340229 (osa) LOC7462871 (ppo) LOC7476388 (ppo) LOC9269153 (osa) LOC11414235 (mtr) LOC11415523 (mtr) LOC100193167 (zma) LOC100216625 (zma) LOC100245419 (vvi) LOC100245665 (vvi) LOC100272925 (zma) LOC100280552 (zma) LOC100785332 (gma) LOC100793754 (gma) LOC100797351 (gma) LOC100806962 (gma) LOC100815521 (gma) ALC (sly) SPT (sly) LOC102668194 (gma) LOC103829540 (bra) LOC103835022 (bra) LOC103854100 (bra) LOC103862298 (bra)

Subcellular
localization
wolf

nucl 9, cyto 1, plas 1, cyto_plas 1	(predict for NP_001078810.1)
nucl 7, nucl_plas 4, cyto 1	(predict for NP_001078811.1)
nucl 9, cyto 1	(predict for NP_201512.1)

Subcellular
localization
TargetP

chlo 8, other 3	(predict for NP_001078810.1)
chlo 8, other 3	(predict for NP_001078811.1)
chlo 8, other 3	(predict for NP_201512.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for ALC]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247035_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247035_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247035_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	836846
Refseq ID (protein)	NP_001078810.1
	NP_001078811.1
	NP_201512.1

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