[←][→] ath   At5g67380 Gene
functional annotation
Function   casein kinase alpha 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010332 [list] [network] response to gamma radiation  (14 genes)  IMP  
GO:0010225 [list] [network] response to UV-C  (15 genes)  IMP  
GO:2001020 [list] [network] regulation of response to DNA damage stimulus  (28 genes)  IEP  
GO:0042752 [list] [network] regulation of circadian rhythm  (61 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IGI  
GO:0051726 [list] [network] regulation of cell cycle  (158 genes)  IEP  
GO:0006281 [list] [network] DNA repair  (203 genes)  IDA  
GO:0006325 [list] [network] chromatin organization  (210 genes)  IDA IEP  
GO CC
GO:0005956 [list] [network] protein kinase CK2 complex  (3 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (454 genes)  IDA  
GO:0016301 [list] [network] kinase activity  (1068 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
ath04712 [list] [network] Circadian rhythm - plant (39 genes)
Protein NP_001032165.1  NP_201539.2 
BLAST NP_001032165.1  NP_201539.2 
Orthologous [Ortholog page] LOC542789 (tae)  AT2G23070 (ath)  CKA3 (ath)  CKA2 (ath)  LOC4332003 (osa)  LOC4334206 (osa)  LOC4342248 (osa)  LOC7489763 (ppo)  LOC7489764 (ppo)  LOC11410839 (mtr)  LOC11434455 (mtr)  LOC18101120 (ppo)  LOC18101134 (ppo)  LOC25493524 (mtr)  LOC100776388 (gma)  LOC100810748 (gma)  LOC100813528 (gma)  LOC100817795 (gma)  LOC100819679 (gma)  LOC100820471 (gma)  LOC101244750 (sly)  LOC101246108 (sly)  LOC101256338 (sly)  LOC103827764 (bra)  LOC103840918 (bra)  LOC103842445 (bra)  LOC103864454 (bra)  LOC123045091 (tae)  LOC123052927 (tae)  LOC123085018 (tae)  LOC123093046 (tae)  LOC123098329 (tae)  LOC123105115 (tae)  LOC123113407 (tae)  LOC123113415 (tae)  LOC123122925 (tae)  LOC123122932 (tae)  LOC123426341 (hvu)  LOC123449374 (hvu)  LOC123452358 (hvu)  LOC123452366 (hvu) 
Subcellular
localization
wolf
cyto 6,  cyto_E.R. 4,  nucl 2,  chlo 1  (predict for NP_001032165.1)
cyto 6,  nucl 1,  mito 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cysk_plas 1,  mito_plas 1  (predict for NP_201539.2)
Subcellular
localization
TargetP
scret 8  (predict for NP_001032165.1)
scret 8  (predict for NP_201539.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath04712 Circadian rhythm - plant 3
ath03015 mRNA surveillance pathway 3
ath04144 Endocytosis 2
Genes directly connected with CKA1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.8 CKA2 casein kinase II, alpha chain 2 [detail] 824162
9.6 MTN1 methylthioadenosine nucleosidase 1 [detail] 830035
9.2 AT2G23070 Protein kinase superfamily protein [detail] 816837
9.0 TOPP1 type one protein phosphatase 1 [detail] 817489
8.6 AT3G12760 defective in cullin neddylation protein [detail] 820458
8.1 AT1G19680 RING/U-box superfamily protein [detail] 838555
7.5 AT3G58670 2-aminoethanethiol dioxygenase, putative (DUF1637) [detail] 825036
7.4 AT1G10660 uncharacterized protein [detail] 837609
6.0 AT1G34150 Pseudouridine synthase family protein [detail] 840314
5.4 AT5G59830 DNA-binding protein [detail] 836104
5.3 AT3G29180 DUF1336 family protein (DUF1336) [detail] 822569
5.1 VEL1 vernalization5/VIN3-like protein [detail] 829143
Coexpressed
gene list		 [Coexpressed gene list for CKA1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247000_at
247000_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247000_at
247000_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247000_at
247000_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836873      
Refseq ID (protein) NP_001032165.1 
NP_201539.2 


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