GO:0010017 red or far-red light signaling pathway
| 76 ath genes in this database. |
[QuickGO]
term: red or far-red light signaling pathway
goid: GO:0010017
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
| Species | Symbol | Supportability of expression data |
Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
|---|---|---|---|---|---|---|---|
| ath | PKS1 | ☆ |  |
 |
phytochrome kinase substrate 1 | 814823 | IMP |
| ath | PHYB | ☆ | |
|
phytochrome B | 816394 | |
| ath | PIL5 | |
|
phytochrome interacting factor 3-like 5 | 816538 | ||
| ath | AFR | |
|
Galactose oxidase/kelch repeat superfamily protein | 816990 | IMP | |
| ath | COL3 | ☆☆ | |
|
CONSTANS-like 3 | 817016 | |
| ath | ELF3 | ☆☆ | |
|
hydroxyproline-rich glycoprotein family protein | 817134 | |
| ath | TED4 | ☆☆ | |
|
Plant heme oxygenase (decyclizing) family protein | 817208 | |
| ath | FUS12 | ☆☆☆ | |
|
proteasome family protein | 817241 | |
| ath | COP1 | ☆☆☆ | |
|
Transducin/WD40 repeat-like superfamily protein | 817857 | |
| ath | SOUL-1 | ☆☆☆ | |
|
SOUL heme-binding family protein | 818374 | IMP |
| ath | TOPP4 | |
|
type one serine/threonine protein phosphatase 4 | 818571 | ||
| ath | ELF4 | ☆☆☆ | |
|
EARLY FLOWERING-like protein (DUF1313) | 818596 | IMP |
| ath | VOZ2 | ☆ | |
|
vascular plant one zinc finger protein 2 | 818841 | |
| ath | COR15A | ☆ | |
|
cold-regulated 15a | 818854 | IEP |
| ath | PP5.2 | ☆☆ | |
|
protein phosphatase 5.2 | 818881 | IMP |
| ath | PIF4 | ☆☆ | |
|
phytochrome interacting factor 4 | 818903 | IMP |
| ath | SPA1 | ☆☆☆ | |
|
SPA (suppressor of phyA-105) protein family | 819242 | IMP |
| ath | JAR1 | ☆ | |
|
Auxin-responsive GH3 family protein | 819244 | |
| ath | DAG2 | ☆ | |
|
Dof-type zinc finger DNA-binding family protein | 819271 | |
| ath | PRR9 | ☆☆☆ | |
|
pseudo-response regulator 9 | 819292 | IMP |
| ath | PIL1 | |
|
phytochrome interacting factor 3-like 1 | 819311 | IEP,IMP | |
| ath | RFI2 | ☆☆ | |
|
RING/U-box superfamily protein | 819383 | |
| ath | FUS9 | ☆ | |
|
Ubiquitin-conjugating enzyme family protein | 820557 | |
| ath | SPA3 | ☆☆☆ | |
|
SPA1-related 3 | 820767 | |
| ath | HYH | ☆☆☆ | |
|
HY5-homolog | 821027 | IBA |
| ath | BBX32 | ☆☆ | |
|
B-box 32 | 821667 | IMP |
| ath | FHY3 | ☆☆ | |
|
far-red elongated hypocotyls 3 | 821781 | IMP |
| ath | MYB21 | ☆ | |
|
myb domain protein 21 | 822401 | |
| ath | PIL6 | ☆☆☆ | |
|
phytochrome interacting factor 3-like 6 | 825075 | |
| ath | FUS6 | ☆☆ | |
|
COP9 signalosome complex subunit 1 | 825286 | |
| ath | PIL2 | |
|
phytochrome interacting factor 3-like 2 | 825382 | IEP | |
| ath | DDB1A | ☆☆☆ | |
|
damaged DNA binding protein 1A | 825890 | |
| ath | DET1 | ☆ | |
|
light-mediated development protein 1 / deetiolated1 (DET1) | 826609 | |
| ath | SPA2 | ☆☆☆ | |
|
SPA1-related 2 | 826712 | |
| ath | COP9 | ☆☆ | |
|
COP9 signalosome, subunit CSN8 | 827049 | |
| ath | FAR1 | ☆☆ | |
|
FRS (FAR1 Related Sequences) transcription factor family | 827173 | IMP |
| ath | PHYD | ☆ | |
|
phytochrome D | 827319 | IGI |
| ath | HB-2 | ☆ | |
|
homeobox protein 2 | 827384 | IEP |
| ath | PHYE | ☆ | |
|
phytochrome E | 827538 | |
| ath | DDB1B | ☆☆ | |
|
damaged DNA binding protein 1B | 827857 | |
| ath | EID1 | ☆ | |
|
F-box family protein | 828008 | |
| ath | SHB1 | |
|
EXS (ERD1/XPR1/SYG1) family protein | 828638 | IMP | |
| ath | LAF1 | |
|
myb domain protein 18 | 828661 | ||
| ath | CSN6B | ☆☆ | |
|
COP9 signalosome subunit 6B | 828749 | |
| ath | ROC1 | ☆☆ | |
|
rotamase CYP 1 | 830029 | |
| ath | PKS4 | ☆ | |
|
phytochrome kinase substrate 4 | 830297 | IMP |
| ath | HY5 | ☆☆☆ | |
|
Basic-leucine zipper (bZIP) transcription factor family protein | 830996 | IBA,IMP |
| ath | COP13 | ☆☆☆ | |
|
Proteasome component (PCI) domain protein | 831275 | |
| ath | CO | ☆ | |
|
B-box type zinc finger protein with CCT domain-containing protein | 831441 | |
| ath | KIN1 | |
|
stress-responsive protein (KIN1) / stress-induced protein (KIN1) | 831453 | IEP | |
| ath | PRR7 | ☆☆☆ | |
|
pseudo-response regulator 7 | 831793 | IMP |
| ath | PHYC | ☆☆ | |
|
phytochrome C | 833570 | |
| ath | COP8 | ☆☆ | |
|
Proteasome component (PCI) domain protein | 834312 | |
| ath | PAT1 | |
|
GRAS family transcription factor | 834867 | ||
| ath | HRB1 | ☆ | |
|
Drought-responsive family protein | 834983 | |
| ath | CSN6A | ☆☆ | |
|
COP9 signalosome subunit 6A | 835727 | |
| ath | SRR1 | |
|
sensitivity to red light reduced protein (SRR1) | 836075 | IMP | |
| ath | PIF7 | ☆ | |
|
phytochrome-interacting factor7 | 836248 | |
| ath | NDPK2 | ☆☆☆ | |
|
nucleoside diphosphate kinase 2 | 836451 | |
| ath | PIF3 | |
|
phytochrome interacting factor 3 | 837479 | IMP | |
| ath | PHYA | ☆☆ | |
|
phytochrome A | 837483 | |
| ath | ARR4 | ☆☆ | |
|
response regulator 4 | 837587 | IMP |
| ath | PKS2 | ☆☆ | |
|
phytochrome kinase substrate 2 | 837989 | |
| ath | AT1G18810 | ☆ | |
|
phytochrome kinase substrate-like protein | 838463 | |
| ath | PAPP2C | ☆☆ | |
|
phytochrome-associated protein phosphatase type 2C | 838835 | |
| ath | GI | ☆☆☆ | |
|
gigantea protein (GI) | 838883 | |
| ath | CSN5A | ☆☆☆ | |
|
COP9 signalosome 5A | 838899 | |
| ath | PFT1 | ☆☆☆ | |
|
phytochrome and flowering time regulatory protein (PFT1) | 839141 | |
| ath | FUS5 | ☆☆ | |
|
Proteasome component (PCI) domain protein | 839241 | |
| ath | HFR1 | ☆ | |
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 839300 | |
| ath | VOZ1 | |
|
vascular plant one zinc finger protein | 839752 | ||
| ath | SPA4 | ☆☆☆ | |
|
SPA1-related 4 | 841743 | |
| ath | ARR3 | ☆ | |
|
response regulator 3 | 842288 | |
| ath | CSN5B | ☆ | |
|
COP9-signalosome 5B | 843463 | |
| ath | RAP2.4 | ☆☆ | |
|
related to AP2 4 | 844143 | IGI |
| ath | FHY1 | ☆ | |
|
far-red elongated hypocotyl 1 | 5007942 |
