GO:0016607 nuclear speck

86 ath genes in this database.

[QuickGO]

term: nuclear speck
goid: GO:0016607

Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Supportability of
expression data		 Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
ath HEN2 ☆☆☆ RNA helicase, ATP-dependent, SK12/DOB1 protein 815269 IDA
ath PHYB ☆ phytochrome B 816394 IEA
ath RSZ22a ☆☆ RNA recognition motif and CCHC-type zinc finger domains containing protein 816995 IBA
ath SE ☆☆☆ C2H2 zinc-finger protein SERRATE (SE) 817252 IDA
ath AT2G33435 ☆☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein 817909 IBA
ath RS2Z33 ☆ arginine/serine-rich zinc knuckle-containing protein 33 818311 IBA,IDA
ath LIS ☆ WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein 818748 IDA
ath PP5.2 ☆☆ protein phosphatase 5.2 818881 IEA
ath AT2G43370 ☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein 818938 IEA
ath SPA1 ☆☆☆ SPA (suppressor of phyA-105) protein family 819242 IEA
ath RS31a ☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein 819273 IBA
ath EMB2016 ☆☆☆ embryo defective 2016 819736 IDA
ath AT3G07590 ☆☆☆ Small nuclear ribonucleoprotein family protein 819950 IDA
ath HUA1 ☆☆ floral homeotic protein (HUA1) 820448 IEA
ath SCL30A ☆☆☆ SC35-like splicing factor 30A 820559 IBA,IDA
ath EIF4A-III ☆☆ eukaryotic initiation factor 4A-III 821513 IDA
ath VRN5 Fibronectin type III domain-containing protein 822034 IDA
ath AT3G47120 ☆☆☆ RNA recognition motif (RRM)-containing protein 823865 IDA
ath SR34a ☆☆☆ SER/ARG-rich protein 34A 824105 IBA
ath U1-70K ☆☆☆ U1 small nuclear ribonucleoprotein-70K 824230 IEA
ath RS2Z32 ☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 824518 IBA
ath FIP37 ☆☆☆ FKBP12 interacting protein 37 824584 IEA
ath SCL30 ☆☆ SC35-like splicing factor 30 824712 IBA,IDA
ath RS31 ☆☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein 825359 IBA,IDA
ath AT3G63400 ☆☆ Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 825515 IEA
ath EMB1691 ☆☆ Methyltransferase MT-A70 family protein 826589 IEA
ath MTA ☆☆ mRNAadenosine methylase 826670 IBA,IDA
ath ML3 827537 IBA
ath AT4G19610 ☆☆☆ nucleotide/nucleic acid binding protein 827703 IBA
ath AT4G20030 ☆ RNA-binding (RRM/RBD/RNP motifs) family protein 827748 IBA
ath SR34b ☆ RNA-binding (RRM/RBD/RNP motifs) family protein 828027 IBA
ath AT4G02840 ☆☆☆ Small nuclear ribonucleoprotein family protein 828163 IDA
ath CPL1 ☆☆☆ C-terminal domain phosphatase-like 1 828254 IEA
ath RS40 ☆☆ arginine/serine-rich splicing factor 35 828654 IBA,IDA
ath LAF1 myb domain protein 18 828661 IEA
ath RSZ22 ☆☆ serine/arginine-rich 22 829285 IBA,IDA
ath AT5G05720 RNA-binding (RRM/RBD/RNP motifs) family protein 830456 IBA
ath FHL far-red-elongated hypocotyl1-like protein 830832 IDA
ath AT5G10350 ☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein 830899 IDA
ath AT5G01160 ☆☆ RING/U-box superfamily protein 831742 IEA
ath SCL28 SC35-like splicing factor 28 831999 IBA,IDA
ath SPL7 ☆☆ squamosa promoter binding protein-like 7 832001 IDA
ath TGH ☆☆☆ SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 832372 IEA
ath COL4 ☆☆☆ zinc finger CONSTANS-like protein 832563 IDA
ath RRC1 ☆☆☆ RNA recognition motif (RRM)-containing protein 832577 IEA
ath SEF HIT-type Zinc finger family protein 833676 IEA
ath U2AF35B ☆☆ Zinc finger C-x8-C-x5-C-x3-H type family protein 834293 IEA
ath PABN1 ☆☆ polyadenylate-binding protein 1 835186 IDA
ath RS41 ☆☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein 835279 IBA
ath RCF3 ☆ RNA-binding KH domain-containing protein 835386 IEA
ath OXS3 ☆☆☆ oxidative stress 3 835756 IBA,IDA
ath VIN3 Fibronectin type III domain-containing protein 835844 IDA
ath SIZ1 ☆☆☆ DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 836163 IEA
ath PIF7 ☆ phytochrome-interacting factor7 836248 IDA
ath ML1 ☆☆ MEI2-like protein 1 836317 IBA
ath AT5G63370 ☆☆ Protein kinase superfamily protein 836456 IEA
ath AT5G63440 ☆☆ hypothetical protein (DUF167) 836463 IEA
ath SC35 ☆☆ serine/arginine-rich splicing factor-like protein, putative 836541 IBA,IDA
ath AT5G65260 ☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein 836651 IDA
ath MEE5 ☆☆☆ Ribosomal protein S5/Elongation factor G/III/V family protein 837131 IDA
ath SR45a ☆☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein 837246 IEA
ath AT1G08390 recQ-mediated instability-like protein 837359 IBA
ath SR30 ☆☆☆ SERINE-ARGININE PROTEIN 30 837433 IBA
ath PHYA ☆☆ phytochrome A 837483 IEA
ath HYL1 ☆☆ dsRNA-binding domain-like superfamily protein 837498 IEA
ath MAGO ☆☆ mago nashi family protein 837560 IDA
ath SR45 ☆☆☆ arginine/serine-rich 45 838230 IDA
ath AT1G21580 ☆☆☆ Zinc finger C-x8-C-x5-C-x3-H type family protein 838759 IDA
ath RSZ21 ☆ RS-containing zinc finger protein 21 838997 IBA,IDA
ath THO2 ☆☆☆ THO2 839081 IDA
ath SR34 ☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein 839262 IBA,IDA
ath AT1G02330 ☆☆ integrator complex subunit-like protein 839367 IDA
ath NLA SPX (SYG1/Pho81/XPR1) domain-containing protein 839559 IEA
ath ATU2AF35A ☆ U2 snRNP auxiliary factor small subunit 839657 IEA
ath ML5 ☆☆ MEI2-like protein 5 839816 IBA
ath SCL33 ☆☆ SC35-like splicing factor 33 841976 IBA,IDA
ath AT1G55460 ☆☆☆ DNA/RNA-binding protein Kin17, conserved region 841993 IDA
ath ULP1D UB-like protease 1D 842317 IEA
ath AtRZ-1b ☆☆☆ RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 842359 IDA
ath AT1G60830 RNA-binding (RRM/RBD/RNP motifs) family protein 842376 IBA
ath AT1G60900 ☆☆☆ U2 snRNP auxilliary factor, large subunit, splicing factor 842382 IBA,IDA
ath AT1G61620 ☆ phosphoinositide binding protein 842458 IDA
ath AT1G76940 ☆ RNA-binding (RRM/RBD/RNP motifs) family protein 844029 IEA
ath SKIP ☆☆ chromatin protein family 844055 IEA
ath LZF1 ☆☆ light-regulated zinc finger protein 1 844196 IDA
ath AT4G26288 hypothetical protein 5008166 IBA


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