KEGG 03008 Ribosome biogenesis in eukaryotes

98  ath genes in this database.
159  gma genes in this database.
86  sly genes in this database.
93  osa genes in this database.
126  zma genes in this database.
143  bra genes in this database.
87  vvi genes in this database.
46  ppo genes in this database.
90  mtr genes in this database.

List of genes in ath


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
814908 O, N NMD3 nonsense-mediated mRNA decay NMD3 family protein
816406 M, M AT2G18900 Transducin/WD40 repeat-like superfamily protein
816569 O, M NOP10 nucleolar RNA-binding Nop10p family protein
816683 O, N AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein
816837 C, C AT2G23070 Protein kinase superfamily protein
816838 O, N CKA3 Protein kinase superfamily protein
817038 O, E AT2G24990 Serine/threonine-protein kinase Rio1
817080 S, N AT2G25420 transducin family protein / WD-40 repeat family protein
817238 S, C AT2G26970 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
817262 O, Y AT2G27200 P-loop containing nucleoside triphosphate hydrolases superfamily protein
818569 O, N eIF6B Translation initiation factor IF6
818920 O, N POP4 ribonuclease P family protein
819076 O, N CKB4 casein kinase II beta subunit 4
819231 O, Y AT2G46230 PIN domain-like family protein
819343 C, N POP1 ribonuclease Ps
819411 O, N SWA1 transducin family protein / WD-40 repeat family protein
819668 O, Y AT3G05060 NOP56-like pre RNA processing ribonucleoprotein
819831 S, P AT3G06530 ARM repeat superfamily protein
819890 O, N NSN1 GTP-binding family protein
820468 O, Y AT3G12860 NOP56-like pre RNA processing ribonucleoprotein
821062 M, C AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
821074 O, C XPO1B exportin 1B
821105 M, N CDC48C cell division cycle 48C
821708 O, Y AT3G21540 transducin family protein / WD-40 repeat family protein
821872 O, Y AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family protein
821969 O, Y AT3G23860 GTP-binding protein-like protein
822253 M, C AT3G26480 Transducin family protein / WD-40 repeat family protein
824162 S, V CKA2 casein kinase II, alpha chain 2
824171 M, Y AT3G50090 Exonuclease family protein
824172 O, C SDN1 small RNA degrading nuclease 1
824290 O, Y AT3G51270 protein serine/threonine kinase
824728 S, N eIF6A Translation initiation factor IF6
824867 O, Y AT3G57000 nucleolar essential protein-like protein
824882 O, Y NAP57 homologue of NAP57
824963 O, Y AT3G57940 GNAT acetyltransferase (DUF699)
825196 O, N CKB3 casein kinase II beta chain 3
825833 O, N AT4G04940 transducin family protein / WD-40 repeat family protein
826172 O, N PCN Transducin family protein / WD-40 repeat family protein
826873 O, Y AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
827484 O, N CKB2 casein kinase II beta chain 2
828039 O, N AT4G02400 U3 ribonucleoprotein (Utp) family protein
828333 O, Y AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
828668 M, C FIB2 fibrillarin 2
828935 O, Y AT4G28200 U3 small nucleolar RNA-associated-like protein
830437 O, Y SDN2 small RNA degrading nuclease 2
830714 O, Y AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
830761 C, N AT5G08600 U3 ribonucleoprotein (Utp) family protein
830994 S, N AT5G11240 transducin family protein / WD-40 repeat family protein
831254 O, N AT5G14050 Transducin/WD40 repeat-like superfamily protein
831431 O, Y AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein
831538 M, C TOZ Transducin family protein / WD-40 repeat family protein
831565 O, N XPO1A exportin 1A
831936 M, Y AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
832123 O, Y RAN-1 RAS-related nuclear protein-1
832124 O, C RAN2 RAS-related GTP-binding nuclear protein 2
832138 O, N AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
832271 M, C AT5G22100 RNA cyclase family protein
832649 O, N AT5G25800 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
832770 O, Y AT5G27120 NOP56-like pre RNA processing ribonucleoprotein
832772 S, Y AT5G27140 NOP56-like pre RNA processing ribonucleoprotein
833709 S, Y AT5G37350 Serine/threonine-protein kinase Rio1
833863 S, N AT5G38720 ribosomal RNA-processing 7 protein
834121 O, N AT5G41190 RNA-binding NOB1-like protein
834261 O, Y XRN2 exoribonuclease 2
834754 O, C CKB1 casein kinase II beta chain 1
835323 M, Y FIB1 fibrillarin 1
835325 M, Y AT5G52490 Fibrillarin family protein
835599 O, Y RAN4 ras-related nuclear protein 4
835612 O, C RAN3 RAN GTPase 3
836120 O, N GAF1 Polymerase/histidinol phosphatase-like protein
836156 M, M AAK6 P-loop containing nucleoside triphosphate hydrolases superfamily protein
836786 O, Y AT5G66540 U3 small nucleolar ribonucleoprotein
836859 O, Y SDN3 small RNA degrading nuclease 3
836873 S, Y CKA1 casein kinase alpha 1
837182 O, Y AT1G06720 P-loop containing nucleoside triphosphate hydrolases superfamily protein
837361 O, N AT1G08410 P-loop containing nucleoside triphosphate hydrolases superfamily protein
837569 O, C AT1G10300 Nucleolar GTP-binding protein
837589 O, N AT1G10490 GNAT acetyltransferase (DUF699)
838113 O, N AT1G15420 WD repeat protein
838115 O, N PWP2 periodic tryptophan protein 2
839193 O, Y AT1G26530 PIN domain-like family protein
839460 O, N EMB1687 ribonuclease P family protein / Rpp14 family protein
839638 O, N AT1G27470 transducin family protein / WD-40 repeat family protein
840982 O, N AT1G43860 sequence-specific DNA binding transcription factor
841514 O, Y AT1G50920 Nucleolar GTP-binding protein
841731 O, N AtNug2 GTP-binding family protein
842063 O, N NOP56 NOP56-like pre RNA processing ribonucleoprotein
842682 M, N IMP4 Ribosomal RNA processing Brix domain protein
842684 O, C AT1G63810 nucleolar protein
843032 S, Y AT1G67120 midasin-like protein
843900 S, Y XRN3 5'-3' exoribonuclease 3
844416 O, C PDE318 P-loop containing nucleoside triphosphate hydrolases superfamily protein
1466252 , rrn23S
1466254 , rrn16S
3769408 , AT3G41768
4042814 , ArthCr089
4042818 , ArthCr091
4042819 , ArthCr088


List of genes in gma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
3989345 , rrn16
3989348 , rrn23
3989350 , rrn5
3989369 , rrn5
3989371 , rrn23
3989374 , rrn16
15308557 , rrnS
15308569 , rrnL
15308615 , rrn5
100305515 O, Y LOC100305515 uncharacterized LOC100305515
100305680 O, C LOC100305680 uncharacterized LOC100305680
100305817 O, Y LOC100305817 uncharacterized LOC100305817
100306226 O, N LOC100306226 putative adenylate kinase
100306262 S, Y LOC100306262 eukaryotic translation initiation factor 6
100306376 O, N LOC100306376 H/ACA ribonucleoprotein complex subunit 3-like protein
100499751 O, Y_N LOC100499751 uncharacterized LOC100499751
100499993 O, Y LOC100499993 uncharacterized LOC100499993
100500437 O, N LOC100500437 RAN GTPase 3
100500467 O, Y LOC100500467 H/ACA ribonucleoprotein complex subunit 3-like protein
100526905 M, C LOC100526905 periodic tryptophan protein 2
100527424 O, Y LOC100527424 uncharacterized LOC100527424
100527772 O, Y LOC100527772 uncharacterized LOC100527772
100527858 O, Y LOC100527858 Orn domain-containing protein
100775298 O, Y LOC100775298 GTP-binding nuclear protein Ran-1-like
100775301 O, Y LOC100775301 probable nucleolar protein 5-2
100775499 O, N LOC100775499 GTPase LSG1-2
100775810 C, C LOC100775810 WD repeat-containing protein 3
100776157 O, N LOC100776157 nucleolar protein 6
100776352 M, C LOC100776352 ribosome maturation protein SBDS-like
100776388 M, C LOC100776388 casein kinase II subunit alpha
100776399 O, N LOC100776399 ribosomal RNA-processing protein 7 homolog A
100776641 O, C LOC100776641 WD repeat-containing protein PCN
100776746 O, N LOC100776746 uncharacterized LOC100776746
100777028 O, N LOC100777028 guanine nucleotide-binding protein-like NSN1
100777602 S, Y LOC100777602 eukaryotic translation initiation factor 6-2
100777699 C, C LOC100777699 WD repeat-containing protein 75
100778294 O, Y LOC100778294 ribosomal RNA small subunit methyltransferase NEP1-like
100778883 M, M LOC100778883 probable RNA 3'-terminal phosphate cyclase-like protein-like
100779287 O, Y LOC100779287 nucleolar protein 6
100779446 O, C LOC100779446 nucleolar protein 56
100779855 O, N LOC100779855 probable ribonuclease P/MRP protein subunit POP5
100780095 O, N LOC100780095 putative casein kinase II subunit beta
100780706 O, Y LOC100780706 H/ACA ribonucleoprotein complex subunit 4
100781028 O, N LOC100781028 nuclear/nucleolar GTPase 2
100781093 O, Y LOC100781093 U3 small nucleolar ribonucleoprotein protein MPP10
100782389 O, Y LOC100782389 U3 small nucleolar ribonucleoprotein protein IMP3
100782798 O, Y LOC100782798 rRNA-processing protein FCF1 homolog
100783068 S, Y LOC100783068 5'-3' exoribonuclease 3
100783244 M, N LOC100783244 transducin beta-like protein 3
100783433 O, Y LOC100783433 protein EXPORTIN 1A
100783434 O, Y LOC100783434 nucleolar protein 56
100783700 S, N LOC100783700 5'-3' exoribonuclease 3
100784007 O, N LOC100784007 uncharacterized protein C57A7.06
100784033 O, Y LOC100784033 nucleolar GTP-binding protein 1
100784148 O, C LOC100784148 WD repeat-containing protein 43
100784315 O, N LOC100784315 putative casein kinase II subunit beta
100784721 O, Y LOC100784721 probable nucleolar protein 5-2
100784848 O, N LOC100784848 putative casein kinase II subunit beta
100785565 O, Y LOC100785565 small RNA degrading nuclease 3
100785683 S, Y LOC100785683 5'-3' exoribonuclease 3
100785714 C, N LOC100785714 20S-pre-rRNA D-site endonuclease nob1
100787912 O, Y LOC100787912 protein EXPORTIN 1A
100788187 O, Y LOC100788187 RNA cytidine acetyltransferase 1
100788480 O, N LOC100788480 ribosomal RNA small subunit methyltransferase NEP1-like
100788649 O, N LOC100788649 nuclear/nucleolar GTPase 2
100788688 O, Y LOC100788688 mediator of RNA polymerase II transcription subunit 36a
100788705 C, N LOC100788705 uncharacterized LOC100788705
100788981 M, Y LOC100788981 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
100789137 M, N LOC100789137 mediator of RNA polymerase II transcription subunit 36a
100789357 O, N LOC100789357 putative casein kinase II subunit beta
100789490 O, N LOC100789490 serine/threonine-protein kinase rio2
100791823 O, N LOC100791823 RNA-binding protein 28
100792176 O, Y LOC100792176 ribosome biogenesis protein BMS1 homolog
100792488 O, Y LOC100792488 rRNA-processing protein FCF1 homolog
100792757 O, Y LOC100792757 WD repeat-containing protein 43
100793573 O, N LOC100793573 putative casein kinase II subunit beta-4
100793629 M, C LOC100793629 periodic tryptophan protein 2
100794359 M, C LOC100794359 nucleolar GTP-binding protein 1
100794470 O, N LOC100794470 nucleolar protein 56
100794821 O, N LOC100794821 RNA-binding protein 28
100795311 O, Y LOC100795311 nucleolar GTP-binding protein 1
100795420 O, C LOC100795420 WD repeat-containing protein 36
100795445 O, Y LOC100795445 oligoribonuclease
100796828 O, Y LOC100796828 WD repeat-containing protein 43
100796963 O, N LOC100796963 small RNA degrading nuclease 5
100796965 O, P LOC100796965 uncharacterized protein At3g06530
100797356 O, N LOC100797356 probable RNA 3'-terminal phosphate cyclase-like protein
100797494 O, N LOC100797494 WD repeat-containing protein PCN
100797497 M, C LOC100797497 ribosome maturation protein SBDS
100797607 O, N LOC100797607 serine/threonine-protein kinase rio2
100797625 M, N LOC100797625 mediator of RNA polymerase II transcription subunit 36a
100798058 O, N LOC100798058 uncharacterized LOC100798058
100798087 O, P LOC100798087 uncharacterized protein At3g06530
100798516 O, Y LOC100798516 U3 small nucleolar ribonucleoprotein protein IMP3
100798712 O, Y LOC100798712 RNA cytidine acetyltransferase 1
100798912 O, Y LOC100798912 NHP2-like protein 1
100798946 O, C LOC100798946 WD repeat-containing protein 36
100799026 O, N LOC100799026 60S ribosomal export protein NMD3
100799236 O, Y LOC100799236 WD repeat-containing protein 43
100799304 O, N LOC100799304 putative casein kinase II subunit beta
100799345 O, N LOC100799345 serine/threonine-protein kinase rio1
100799557 O, C LOC100799557 guanine nucleotide-binding protein-like NSN1
100799823 M, Y LOC100799823 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
100800291 C, N LOC100800291 RNA-binding protein NOB1-like
100800352 O, C LOC100800352 uncharacterized LOC100800352
100800513 M, N LOC100800513 cell division control protein 48 homolog C
100800955 C, C LOC100800955 WD repeat-containing protein 3
100801379 O, Y LOC100801379 GTP-binding nuclear protein Ran-3
100802384 O, Y LOC100802384 protein EXPORTIN 1A
100802650 O, N LOC100802650 ribosomal RNA-processing protein 7 homolog A
100802747 O, Y LOC100802747 ribonuclease P protein subunit p29
100802793 O, N LOC100802793 small RNA degrading nuclease 5
100803810 M, N LOC100803810 U3 small nucleolar ribonucleoprotein protein IMP4-like
100804186 O, Y LOC100804186 H/ACA ribonucleoprotein complex subunit 2-like protein
100806023 O, N LOC100806023 U3 small nucleolar RNA-associated protein 18 homolog
100806066 O, N LOC100806066 protein SLOW WALKER 1
100806355 O, Y LOC100806355 H/ACA ribonucleoprotein complex subunit 4
100806692 O, N LOC100806692 U3 small nucleolar RNA-associated protein 18 homolog
100807740 C, C LOC100807740 WD repeat-containing protein 75
100807916 O, Y LOC100807916 uncharacterized LOC100807916
100809594 M, C LOC100809594 cell division control protein 48 homolog C
100810701 O, N LOC100810701 adenylate kinase isoenzyme 6 homolog
100810748 O, N LOC100810748 casein kinase II subunit alpha-2
100810906 O, Y LOC100810906 ribosome biogenesis protein BMS1 homolog
100811431 O, N LOC100811431 U3 small nucleolar RNA-associated protein 14
100812924 O, Y LOC100812924 RNA cytidine acetyltransferase 1-like
100813067 O, Y LOC100813067 GTP-binding nuclear protein Ran-3
100813443 O, Y LOC100813443 protein EXPORTIN 1A
100813528 O, N LOC100813528 casein kinase II subunit alpha-2
100813605 O, Y LOC100813605 GTP-binding nuclear protein Ran-3
100813838 O, Y LOC100813838 rRNA-processing protein FCF1 homolog
100813909 O, Y LOC100813909 eukaryotic translation initiation factor 6-2
100814146 O, Y LOC100814146 GTP-binding nuclear protein Ran-3
100814656 O, N LOC100814656 mediator of RNA polymerase II transcription subunit 36a
100814677 M, N LOC100814677 U3 small nucleolar ribonucleoprotein protein IMP4-like
100815023 O, N LOC100815023 GTPase LSG1-2
100815458 O, C LOC100815458 WD repeat-containing protein 43
100815506 O, N LOC100815506 nucleolar protein 56
100817094 O, Y LOC100817094 U3 small nucleolar RNA-associated protein 6 homolog
100817163 O, Y LOC100817163 5'-3' exoribonuclease 2-like
100817428 O, Y LOC100817428 U3 small nucleolar ribonucleoprotein protein IMP3
100817523 O, N LOC100817523 GTPase LSG1-2
100817627 O, Y LOC100817627 NHP2-like protein 1
100817637 O, N LOC100817637 serine/threonine-protein kinase RIO1
100817724 O, Y LOC100817724 U3 small nucleolar ribonucleoprotein protein MPP10
100817795 M, M LOC100817795 casein kinase II subunit alpha-4, chloroplastic
100819679 M, Y LOC100819679 casein kinase II subunit alpha-2
100820428 O, Y LOC100820428 U3 small nucleolar RNA-associated protein 6 homolog
100820471 S, C LOC100820471 casein kinase II subunit alpha-1-like
102661153 O, Y LOC102661153 U3 small nucleolar ribonucleoprotein protein IMP3
102663906 O, N LOC102663906 midasin
102665314 O, Y LOC102665314 transducin beta-like protein 3
102667004 M, C LOC102667004 WD repeat-containing protein 43
102668105 O, N LOC102668105 protein SLOW WALKER 1
102669420 O, N LOC102669420 ribosomal RNA small subunit methyltransferase NEP1
102669841 O, N LOC102669841 midasin
102670478 C, N LOC102670478 uncharacterized LOC102670478
106797977 M, C LOC106797977 transducin beta-like protein 3
112998160 O, S LOC112998160 small RNA degrading nuclease 1-like


List of genes in sly


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
778289 O, C RAN1 Ran protein/TC4 protein
778290 O, Y RAN2A GTP-binding nuclear protein Ran2A
778291 O, Y RAN2B Ran protein/TC4 protein
3950430 , LyesC2r008
3950431 , LyesC2r002
3950432 , LyesC2r007
3950435 , LyesC2r004
3950436 , LyesC2r005
3950467 , LyesC2r001
100037516 O, N LOC100037516 nuclear GTPase-like
100313952 O, Y Xpo1 exportin 1
101055607 M, M LOC101055607 Hop-interacting protein THI105
101243653 O, Y LOC101243653 WD repeat-containing protein 43
101244750 O, Y LOC101244750 casein kinase II subunit alpha-2
101244799 O, C LOC101244799 NHP2-like protein 1
101245092 M, N LOC101245092 cell division control protein 48 homolog C
101245392 C, N LOC101245392 U3 small nucleolar RNA-associated protein 14 homolog A
101245433 O, Y LOC101245433 eukaryotic translation initiation factor 6-2-like
101245655 O, N LOC101245655 putative casein kinase II subunit beta-4
101245772 O, N LOC101245772 guanine nucleotide-binding protein-like NSN1
101246000 M, Y LOC101246000 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
101246108 C, C LOC101246108 casein kinase II subunit alpha
101246325 O, N LOC101246325 transducin beta-like protein 3
101246451 C, N LOC101246451 nuclear/nucleolar GTPase 2-like
101246833 O, N LOC101246833 casein kinase II subunit beta-3
101247688 M, C LOC101247688 probable RNA 3'-terminal phosphate cyclase-like protein
101248085 S, Y LOC101248085 5'-3' exoribonuclease 3-like
101248232 O, Y LOC101248232 serine/threonine-protein kinase rio2
101248438 O, N LOC101248438 small RNA degrading nuclease 1-like
101249658 O, Y LOC101249658 nucleolar GTP-binding protein 1-like
101249856 O, N LOC101249856 putative casein kinase II subunit beta-4
101249951 O, Y LOC101249951 oligoribonuclease
101249952 O, C LOC101249952 probable ribonuclease P/MRP protein subunit POP5
101249976 O, Y LOC101249976 alpha-L RNA-binding motif/ribosomal protein S4 family protein
101250547 O, Y LOC101250547 nucleolar protein 56
101250712 O, N LOC101250712 nuclear/nucleolar GTPase 2
101251776 C, N LOC101251776 protein SLOW WALKER 1
101252008 C, C LOC101252008 uncharacterized LOC101252008
101252265 M, C LOC101252265 periodic tryptophan protein 2
101252549 O, N LOC101252549 uncharacterized LOC101252549
101252860 O, Y LOC101252860 rRNA-processing protein FCF1 homolog
101253090 O, N LOC101253090 uncharacterized LOC101253090
101253657 M, N LOC101253657 U3 small nucleolar ribonucleoprotein protein IMP4
101253879 O, N LOC101253879 U3 small nucleolar ribonucleoprotein protein MPP10
101253905 O, C LOC101253905 60S ribosomal export protein NMD3
101254131 O, C LOC101254131 WD repeat-containing protein 36
101254236 O, M LOC101254236 H/ACA ribonucleoprotein complex subunit 3-like protein
101254633 O, Y LOC101254633 nucleolar GTP-binding protein 1
101254771 O, N LOC101254771 WD repeat-containing protein PCN
101255078 S, N LOC101255078 eukaryotic translation initiation factor 6-2
101255259 O, Y LOC101255259 H/ACA ribonucleoprotein complex subunit 4
101255622 O, E LOC101255622 uncharacterized LOC101255622
101255780 O, C LOC101255780 WD repeat-containing protein 43
101255995 O, Y LOC101255995 probable nucleolar protein 5-2
101256087 O, N LOC101256087 WD repeat-containing protein PCN
101256338 O, Y LOC101256338 casein kinase II subunit alpha-1
101256636 O, N LOC101256636 U3 small nucleolar RNA-associated protein 18 homolog
101257021 O, C LOC101257021 WD repeat-containing protein 3
101257119 O, N LOC101257119 putative casein kinase II subunit beta-4
101257911 O, Y LOC101257911 U3 small nucleolar RNA-associated protein 6 homolog
101258362 O, Y LOC101258362 small RNA degrading nuclease 5
101258364 O, N LOC101258364 midasin
101258526 O, Y LOC101258526 elongation factor-like GTPase 1
101258556 S, Y LOC101258556 5'-3' exoribonuclease 3
101258649 M, C LOC101258649 ribosome maturation protein SBDS
101258878 C, C LOC101258878 WD repeat-containing protein 75
101258943 O, Y LOC101258943 RNA cytidine acetyltransferase 2-like
101259128 O, N LOC101259128 uncharacterized LOC101259128
101259578 M, C LOC101259578 nucleolar GTP-binding protein 1
101260019 O, Y LOC101260019 ribosomal RNA small subunit methyltransferase NEP1
101260390 O, C LOC101260390 nucleolar protein 6
101260825 M, M LOC101260825 adenylate kinase isoenzyme 6 homolog
101261441 M, N LOC101261441 U3 small nucleolar ribonucleoprotein protein IMP4-like
101261490 M, Y LOC101261490 mediator of RNA polymerase II transcription subunit 36a-like
101261733 O, Y LOC101261733 serine/threonine-protein kinase RIO1-like
101261781 O, C LOC101261781 GTPase LSG1-2
101263645 O, N LOC101263645 RNA-binding protein 28
101263757 O, Y LOC101263757 MAR-binding protein
101264943 O, Y LOC101264943 oligoribonuclease
101265791 O, Y LOC101265791 eukaryotic translation initiation factor 6-2
101266977 C, Y LOC101266977 ribosome biogenesis protein BMS1 homolog
101267297 M, P LOC101267297 uncharacterized protein At3g06530
101267649 O, C LOC101267649 NHP2-like protein 1
101268074 O, Y LOC101268074 H/ACA ribonucleoprotein complex subunit 2-like protein
101268734 O, N LOC101268734 uncharacterized LOC101268734
101268743 O, N LOC101268743 eukaryotic translation initiation factor 6-2-like


List of genes in osa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
3131364 , OrsajCr113
3131367 , OrsajCr114
3131369 , OrsajCr116
3131375 , OrsajCr117
3131377 , OrsajCr119
3131380 , OrsajCr120
4324901 O, N LOC4324901 serine/threonine-protein kinase rio2
4324952 S, Y LOC4324952 5'-3' exoribonuclease 3
4325312 O, C LOC4325312 GTP-binding nuclear protein Ran-1-like
4325442 O, N LOC4325442 guanine nucleotide-binding protein-like NSN1
4326248 O, N LOC4326248 WD repeat-containing protein 43
4326910 O, Y LOC4326910 eukaryotic translation initiation factor 6-2
4328001 O, N LOC4328001 U3 small nucleolar RNA-associated protein 6 homolog
4328064 O, N LOC4328064 RNA-binding protein NOB1
4329057 O, C LOC4329057 ribosomal RNA small subunit methyltransferase nep-1
4329319 O, C LOC4329319 oligoribonuclease
4329368 C, N LOC4329368 5'-3' exoribonuclease 3
4329457 C, N LOC4329457 uncharacterized LOC4329457
4330603 O, Y LOC4330603 H/ACA ribonucleoprotein complex subunit 2-like protein
4330604 O, N LOC4330604 eukaryotic translation initiation factor 5B
4331181 M, Y LOC4331181 mediator of RNA polymerase II transcription subunit 36a
4331644 O, N LOC4331644 WD repeat-containing protein 3
4332003 O, Y LOC4332003 casein kinase II subunit alpha-2
4332209 O, Y LOC4332209 NHP2-like protein 1
4332567 O, N LOC4332567 WD repeat-containing protein 43
4332742 O, Y LOC4332742 ribosome biogenesis protein bms1
4332800 O, Y LOC4332800 U3 small nucleolar RNA-associated protein 14
4332840 O, Y LOC4332840 probable nucleolar protein 5-2
4332841 O, Y LOC4332841 probable nucleolar protein 5-2
4332851 O, N LOC4332851 nucleolar protein 56
4332852 O, N LOC4332852 nuclear/nucleolar GTPase 2-like
4332935 O, Y LOC4332935 H/ACA ribonucleoprotein complex subunit 4
4333574 M, N LOC4333574 GTPase LSG1-2
4333588 O, N LOC4333588 elongation factor-like GTPase 1
4334021 M, C LOC4334021 WD repeat-containing protein PCN
4334206 M, C LOC4334206 casein kinase II subunit alpha-2
4334461 O, N LOC4334461 RNA-binding protein 28
4334625 O, N LOC4334625 RNA-binding protein 28
4334688 M, M LOC4334688 probable RNA 3'-terminal phosphate cyclase-like protein
4334849 O, Y LOC4334849 protein EXPORTIN 1A
4335406 O, Y LOC4335406 probable ribonuclease P/MRP protein subunit POP5
4336577 C, P LOC4336577 uncharacterized protein At3g06530
4336736 O, Y LOC4336736 H/ACA ribonucleoprotein complex subunit 4
4336833 M, N LOC4336833 transducin beta-like protein 3
4337228 O, N LOC4337228 small RNA degrading nuclease 1
4337293 M, N LOC4337293 U3 small nucleolar ribonucleoprotein protein IMP3
4338260 O, C LOC4338260 probable ribonuclease P/MRP protein subunit POP5
4339079 O, N LOC4339079 uncharacterized LOC4339079
4339341 M, Y LOC4339341 periodic tryptophan protein 2
4339683 O, C LOC4339683 GTP-binding nuclear protein Ran-2-like
4339880 M, C LOC4339880 cell division control protein 48 homolog C
4340192 O, Y LOC4340192 rRNA-processing protein FCF1 homolog
4340389 O, Y LOC4340389 nucleolar GTP-binding protein 1
4340741 O, Y LOC4340741 H/ACA ribonucleoprotein complex subunit 2-like protein
4342225 O, Y LOC4342225 nucleolar GTP-binding protein 1
4342248 O, N LOC4342248 casein kinase II subunit alpha-2
4342459 O, Y LOC4342459 serine/threonine-protein kinase RIO1
4342750 C, C LOC4342750 protein SLOW WALKER 1
4343011 M, M LOC4343011 adenylate kinase isoenzyme 6 homolog
4343287 O, N LOC4343287 putative casein kinase II subunit beta-4
4343836 O, N LOC4343836 U3 small nucleolar RNA-associated protein 18 homolog
4344029 C, Y LOC4344029 H/ACA ribonucleoprotein complex subunit 4
4344055 S, Y LOC4344055 eukaryotic translation initiation factor 6-2
4344458 M, C LOC4344458 ribosome maturation protein SBDS
4344688 M, N LOC4344688 U3 small nucleolar ribonucleoprotein protein IMP4
4344710 C, C LOC4344710 nucleolar GTP-binding protein 1
4348007 O, C LOC4348007 13 kDa ribonucleoprotein-associated protein
4348797 M, Y LOC4348797 midasin
4349414 O, N LOC4349414 putative casein kinase II subunit beta-4
4349477 O, C LOC4349477 60S ribosomal export protein NMD3
4349529 O, N LOC4349529 uncharacterized LOC4349529
4349717 O, N LOC4349717 U3 small nucleolar ribonucleoprotein protein MPP10
4350687 M, Y LOC4350687 probable nucleolar protein 5-1
4350782 M, N LOC4350782 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
4351433 O, N LOC4351433 U3 small nucleolar ribonucleoprotein protein MPP10
4351600 S, Y LOC4351600 nucleolar protein 6
4351627 O, Y LOC4351627 RNA cytidine acetyltransferase 1
4351650 O, N LOC4351650 ribonuclease P protein subunit p30
4352036 C, C LOC4352036 uncharacterized LOC4352036
4352760 M, C LOC4352760 WD repeat-containing protein 75
4352809 O, N LOC4352809 GTPase LSG1-2
4352882 M, N LOC4352882 uncharacterized LOC4352882
6450136 , rrn5
6450145 , rrn26
6450167 , rrn18
9266224 M, Y LOC9266224 probable mediator of RNA polymerase II transcription subunit 36b
9266942 O, Y LOC9266942 GTP-binding nuclear protein Ran-3
9269093 C, C LOC9269093 small RNA degrading nuclease 5
9269193 O, Y_N LOC9269193 ribonuclease P protein subunit p25
9269830 O, N LOC9269830 H/ACA ribonucleoprotein complex subunit 3-like protein
9270337 O, N LOC9270337 oligoribonuclease
9270402 O, C LOC9270402 U3 small nucleolar RNA-associated protein 21 homolog
9271052 O, N LOC9271052 uncharacterized LOC9271052


List of genes in zma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
541823 O, N LOC541823 CK2 regulatory subunit B1
541824 O, N LOC541824 casein kinase II subunit beta-4
541825 O, Y LOC541825 protein kinase CK2 catalytic subunit CK2 alpha-3
542460 S, C LOC542460 CK2 protein kinase alpha 2
542628 O, N LOC542628 uncharacterized LOC542628
542637 O, Y LOC542637 Casein kinase II subunit alpha
1466350 , ZemaCr113
1466351 , ZemaCr114
1466353 , ZemaCr116
1466354 , ZemaCr117
1466356 , ZemaCr119
1466357 , ZemaCr120
100191510 M, Y LOC100191510 periodic tryptophan protein 2
100191832 M, M LOC100191832 RNA 3-terminal phosphate cyclase-like protein
100192839 C, S LOC100192839 uncharacterized LOC100192839
100193012 O, Y LOC100193012 uncharacterized LOC100193012
100193155 M, Y LOC100193155 U3 small nucleolar ribonucleoprotein protein IMP3-like
100193178 O, N LOC100193178 uncharacterized LOC100193178
100193188 M, C LOC100193188 uncharacterized LOC100193188
100193260 O, C LOC100193260 GTP-binding nuclear protein Ran-A1
100193550 O, N LOC100193550 rRNA processing 7-like
100193557 M, C LOC100193557 Transducin family protein / WD-40 repeat family protein
100193563 O, N LOC100193563 WD repeat-containing protein 50
100193822 M, N LOC100193822 Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
100193917 C, P LOC100193917 uncharacterized LOC100193917
100194088 O, Y LOC100194088 uncharacterized LOC100194088
100194368 O, E LOC100194368 nonsense-mediated mRNA decay NMD3 family protein
100216667 M, N LOC100216667 uncharacterized LOC100216667
100217272 O, N LOC100217272 uncharacterized LOC100217272
100272445 O, Y LOC100272445 ribonuclease P
100272977 O, Y LOC100272977 uncharacterized LOC100272977
100273647 O, Y LOC100273647 uncharacterized LOC100273647
100273853 M, N LOC100273853 putative H/ACA ribonucleoprotein complex subunit family protein
100274243 O, N LOC100274243 uncharacterized LOC100274243
100274475 O, N LOC100274475 uncharacterized LOC100274475
100274701 O, M LOC100274701 uncharacterized LOC100274701
100275579 O, C LOC100275579 uncharacterized LOC100275579
100275739 , LOC100275739 26S ribosomal RNA gene
100276745 C, C LOC100276745 uncharacterized LOC100276745
100276770 O, N LOC100276770 uncharacterized LOC100276770
100279072 O, C LOC100279072 uncharacterized LOC100279072
100279258 O, N LOC100279258 uncharacterized LOC100279258
100279266 M, C LOC100279266 uncharacterized LOC100279266
100279295 O, Y LOC100279295 Cell division control protein 48 homolog C
100280230 O, C LOC100280230 transducin family protein / WD-40 repeat family protein
100280396 O, N LOC100280396 uncharacterized LOC100280396
100280516 O, N LOC100280516 serine/threonine-protein kinase RIO2
100281088 S, C LOC100281088 eukaryotic translation initiation factor 6
100282167 M, C LOC100282167 uncharacterized LOC100282167
100282435 M, C LOC100282435 uncharacterized 100282435
100282562 O, C LOC100282562 ribosome biogenesis protein NEP1
100282567 S, Y LOC100282567 eukaryotic translation initiation factor 6
100282785 O, N LOC100282785 uncharacterized LOC100282785
100282843 O, Y LOC100282843 uncharacterized LOC100282843
100283448 O, N LOC100283448 casein kinase II subunit beta-4
100283854 O, Y LOC100283854 nucleolar GTP-binding protein 2
100283975 O, Y LOC100283975 uncharacterized LOC100283975
100284024 O, N LOC100284024 serine/threonine-protein kinase RIO1
100284315 C, C LOC100284315 small nucleolar ribonucleoprotein complex subunit
100284497 O, M LOC100284497 h/ACA ribonucleoprotein complex subunit 3-like protein
100285001 M, C LOC100285001 nucleolar GTP-binding protein 1
100303837 O, N LOC100303837 NHP2-like protein 1
100382806 O, Y LOC100382806 uncharacterized LOC100382806
100383022 M, C LOC100383022 Transducin/WD40 repeat-like superfamily protein
100383366 O, N LOC100383366 Small RNA degrading nuclease 5
100383935 O, Y LOC100383935 uncharacterized LOC100383935
100384227 O, E LOC100384227 Protein EXPORTIN 1A
100384739 O, Y LOC100384739 putative nucleolar protein 5-1
100501093 O, Y LOC100501093 uncharacterized LOC100501093
100501283 C, C LOC100501283 uncharacterized LOC100501283
100501489 O, C LOC100501489 uncharacterized LOC100501489
100501750 O, Y LOC100501750 nonsense-mediated mRNA decay NMD3 family protein
100502456 O, C LOC100502456 nonsense-mediated mRNA decay NMD3 family protein
100502498 O, Y LOC100502498 H/ACA ribonucleoprotein complex subunit 4
103625708 O, Y LOC103625708 protein EXPORTIN 1A
103625805 O, N LOC103625805 RNA-binding protein 28
103625865 S, Y LOC103625865 casein kinase II subunit alpha-2
103625908 O, C LOC103625908 U3 small nucleolar RNA-associated protein 4 homolog
103625958 O, Y LOC103625958 probable mediator of RNA polymerase II transcription subunit 36b
103627813 O, K LOC103627813 serine/threonine-protein kinase rio1-like
103629618 O, Y LOC103629618 casein kinase II subunit alpha-like
103629872 O, Y LOC103629872 nucleolar GTP-binding protein 1
103630233 O, Y LOC103630233 cell division control protein 48 homolog C
103630287 O, N LOC103630287 ribonuclease P protein subunit p29-like
103630317 M, M LOC103630317 NHP2-like protein 1
103630487 O, Y LOC103630487 midasin
103630761 C, C LOC103630761 GTP-binding nuclear protein Ran-2
103631143 O, N LOC103631143 uncharacterized LOC103631143
103631271 O, Y LOC103631271 probable nucleolar protein 5-2
103632249 M, Y LOC103632249 adenylate kinase isoenzyme 6 homolog
103633408 M, M LOC103633408 cell division control protein 48 homolog C
103633413 O, N LOC103633413 uncharacterized LOC103633413
103633590 M, N LOC103633590 ribonucleases P/MRP protein subunit POP1
103634524 O, N LOC103634524 transducin family protein / WD-40 repeat family protein
103634616 O, N LOC103634616 ribosome biogenesis protein BMS1 homolog
103634670 O, C LOC103634670 U3 small nucleolar RNA-associated protein 14
103637006 O, Y LOC103637006 cell division control protein 48 homolog C
103637360 C, C LOC103637360 GTP-binding nuclear protein Ran1B
103638047 O, Y LOC103638047 rRNA-processing protein FCF1 homolog
103638052 O, Y LOC103638052 rRNA-processing protein FCF1 homolog
103639131 O, Y LOC103639131 nucleolar protein 56
103639139 O, Y LOC103639139 probable nucleolar protein 5-2
103642006 M, C LOC103642006 transducin beta-like protein 3
103642611 C, C LOC103642611 cell division control protein 48 homolog C-like
103643809 O, Y LOC103643809 elongation factor-like GTPase 1
103643972 O, Y LOC103643972 U3 small nucleolar RNA-associated protein 4
103644093 O, Y LOC103644093 probable nucleolar protein 5-1
103645062 , LOC103645062 nucleolar protein pseudogene
103645842 O, N LOC103645842 small RNA degrading nuclease 1
103647603 O, N LOC103647603 serine/threonine-protein kinase RIO1
103648282 O, N LOC103648282 U3 small nucleolar RNA-associated protein 6 homolog
103648459 M, C LOC103648459 cell division control protein 48 homolog C
103649398 O, Y LOC103649398 probable nucleolar protein 5-2
103649956 O, Y LOC103649956 H/ACA ribonucleoprotein complex subunit 4
103649964 O, Y LOC103649964 5'-3' exoribonuclease 3
103652231 O, M LOC103652231 ribonuclease P protein subunit p25-like protein
103652757 O, Y LOC103652757 NHP2-like protein 1
103654383 O, N LOC103654383 5'-3' exoribonuclease 2
103656042 O, Y LOC103656042 cell division control protein 48 homolog C
107521957 O, Y LOC107521957 uncharacterized LOC107521957
109939150 O, N LOC109939150 serine/threonine-protein kinase rio1-like
109939174 O, Y LOC109939174 rRNA-processing protein FCF1 homolog
109941429 O, Y LOC109941429 RNA cytidine acetyltransferase 1
109942013 O, Y LOC109942013 casein kinase II subunit alpha-4, chloroplastic
109944832 O, Y LOC109944832 NHP2-like protein 1
109945944 O, Y_N LOC109945944 NHP2-like protein 1


List of genes in bra


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
103827764 O, N LOC103827764 casein kinase II subunit alpha-2
103827864 O, N LOC103827864 casein kinase II subunit beta-1
103827874 O, Y LOC103827874 small RNA degrading nuclease 1
103828020 O, Y LOC103828020 5'-3' exoribonuclease 2
103828170 O, M LOC103828170 H/ACA ribonucleoprotein complex subunit 3-like protein
103828224 M, C LOC103828224 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
103828358 M, C LOC103828358 WD repeat-containing protein 75
103829525 O, N LOC103829525 small RNA degrading nuclease 3
103829595 O, N LOC103829595 U3 small nucleolar ribonucleoprotein protein MPP10
103829878 O, N LOC103829878 small RNA degrading nuclease 3-like
103830088 O, Y LOC103830088 H/ACA ribonucleoprotein complex subunit 4
103830251 O, N LOC103830251 casein kinase II subunit beta-3
103830456 C, C LOC103830456 nucleolar GTP-binding protein 1-like
103831080 O, N LOC103831080 60S ribosomal export protein NMD3-like
103832011 S, Y LOC103832011 5'-3' exoribonuclease 3
103832456 C, C LOC103832456 nucleolar GTP-binding protein 1
103832537 O, N LOC103832537 nucleolar protein 56-like
103833060 M, M LOC103833060 probable RNA 3'-terminal phosphate cyclase-like protein
103834774 O, N LOC103834774 U3 small nucleolar RNA-associated protein 6 homolog
103834862 M, Y LOC103834862 mediator of RNA polymerase II transcription subunit 36a
103834989 O, Y_N LOC103834989 nucleolar protein 6
103835391 C, N LOC103835391 U3 small nucleolar RNA-associated protein 4 homolog
103836025 M, C LOC103836025 periodic tryptophan protein 2 homolog
103836027 O, N LOC103836027 WD repeat-containing protein 43-like
103836394 O, N LOC103836394 GTPase LSG1-2
103836559 O, Y LOC103836559 nucleolar GTP-binding protein 1
103836710 O, N LOC103836710 oligoribonuclease
103836750 C, N LOC103836750 uncharacterized protein C57A7.06-like
103837322 O, N LOC103837322 probable nucleolar protein 5-1
103837692 O, N LOC103837692 U3 small nucleolar ribonucleoprotein protein MPP10-like
103838016 O, M LOC103838016 H/ACA ribonucleoprotein complex subunit 3-like protein
103838098 M, N LOC103838098 U3 small nucleolar ribonucleoprotein protein IMP4
103839035 O, N LOC103839035 U3 small nucleolar RNA-associated protein 4-like
103839875 O, Y LOC103839875 NHP2-like protein 1 homolog
103840918 S, C LOC103840918 casein kinase II subunit alpha-like
103840928 O, N LOC103840928 small RNA degrading nuclease 1-like
103841047 O, Y LOC103841047 serine/threonine-protein kinase rio2
103841473 S, Y LOC103841473 eukaryotic translation initiation factor 6-2
103841604 O, N LOC103841604 ribosomal RNA small subunit methyltransferase NEP1
103841691 O, Y LOC103841691 RNA cytidine acetyltransferase 2
103841878 O, N LOC103841878 casein kinase II subunit beta-3-like
103842445 C, C LOC103842445 casein kinase II subunit alpha-4, chloroplastic
103842525 O, N LOC103842525 RNA-binding protein 28
103842599 O, M LOC103842599 H/ACA ribonucleoprotein complex subunit 3-like protein
103843541 O, Y LOC103843541 ribosome biogenesis protein BMS1 homolog
103843917 M, M LOC103843917 probable RNA 3'-terminal phosphate cyclase-like protein
103844015 C, Y LOC103844015 ribosome biogenesis protein BMS1 homolog
103844050 O, P LOC103844050 protein EXPORTIN 1B
103844227 O, Y LOC103844227 nucleolar GTP-binding protein 1-like
103844233 O, N LOC103844233 probable ribonuclease P/MRP protein subunit POP5
103844963 O, C LOC103844963 GTP-binding nuclear protein Ran-3
103845416 O, N LOC103845416 uncharacterized LOC103845416
103845454 M, Y LOC103845454 adenylate kinase isoenzyme 6 homolog
103846276 O, C LOC103846276 protein EXPORTIN 1A-like
103846300 M, C LOC103846300 transducin beta-like protein 3
103846516 O, N LOC103846516 U3 small nucleolar RNA-associated protein 18 homolog
103846739 O, N LOC103846739 WD repeat-containing protein 43
103847136 O, C LOC103847136 H/ACA ribonucleoprotein complex subunit 2-like protein
103847709 M, M LOC103847709 ribosome maturation protein SBDS
103849030 O, Y LOC103849030 60S ribosomal export protein NMD3-like
103849056 O, N LOC103849056 nucleolar protein 56-like
103849537 O, N LOC103849537 guanine nucleotide-binding protein-like NSN1
103849712 O, M LOC103849712 nucleolar GTP-binding protein 1
103850212 C, N LOC103850212 20S-pre-rRNA D-site endonuclease nob1-like
103850685 O, Y LOC103850685 H/ACA ribonucleoprotein complex subunit 2-like protein
103850762 S, N LOC103850762 WD repeat-containing protein 43-like
103850911 O, N LOC103850911 U3 small nucleolar RNA-associated protein 18 homolog
103851003 O, Y LOC103851003 U3 small nucleolar ribonucleoprotein protein IMP3-like
103851063 M, C LOC103851063 transducin beta-like protein 3
103851080 O, N LOC103851080 protein EXPORTIN 1A
103851163 M, C LOC103851163 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
103851319 O, C LOC103851319 GTP-binding nuclear protein Ran-2-like
103851531 O, N LOC103851531 uncharacterized LOC103851531
103851894 O, C LOC103851894 GTP-binding nuclear protein Ran-3
103852096 M, C LOC103852096 mediator of RNA polymerase II transcription subunit 36a-like
103852375 O, N LOC103852375 midasin
103852968 S, Y LOC103852968 5'-3' exoribonuclease 3-like
103853527 O, Y LOC103853527 H/ACA ribonucleoprotein complex subunit 4-like
103853778 O, N LOC103853778 casein kinase II subunit beta-1
103854143 O, Y LOC103854143 nucleolar protein 56-like
103854733 O, N LOC103854733 small RNA degrading nuclease 5-like
103855132 O, Y LOC103855132 protein EXPORTIN 1B-like
103855586 O, N LOC103855586 casein kinase II subunit beta'-like
103855657 O, N LOC103855657 protein SLOW WALKER 1
103855764 O, Y LOC103855764 H/ACA ribonucleoprotein complex subunit 2-like protein
103856024 S, Y LOC103856024 eukaryotic translation initiation factor 6-2-like
103856160 O, Y LOC103856160 U3 small nucleolar ribonucleoprotein protein IMP3
103856228 O, N LOC103856228 protein EXPORTIN 1A-like
103856265 C, C LOC103856265 nucleolar GTP-binding protein 1-like
103856285 M, C LOC103856285 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
103856413 O, C LOC103856413 GTP-binding nuclear protein Ran-2
103856428 O, Y LOC103856428 NHP2-like protein 1
103856565 M, N LOC103856565 adenylate kinase isoenzyme 6 homolog
103857364 O, C LOC103857364 cell division control protein 48 homolog C-like
103858139 O, N LOC103858139 putative casein kinase II subunit beta-4
103858364 O, Y LOC103858364 topless-related protein 4
103858462 O, N LOC103858462 U3 small nucleolar RNA-associated protein 4
103858643 O, Y LOC103858643 NHP2-like protein 1
103858678 O, C LOC103858678 U3 small nucleolar RNA-associated protein 21 homolog
103858902 M, N LOC103858902 cell division control protein 48 homolog C
103859164 C, P LOC103859164 uncharacterized protein At3g06530
103859198 O, C LOC103859198 guanine nucleotide-binding protein-like NSN1
103859472 O, N LOC103859472 nucleolar protein 56-like
103860007 O, Y LOC103860007 NHP2-like protein 1
103860702 O, N LOC103860702 serine/threonine-protein kinase rio2-like
103860926 O, N LOC103860926 casein kinase II subunit beta'
103861582 M, Y LOC103861582 mediator of RNA polymerase II transcription subunit 36a-like
103863145 S, Y LOC103863145 eukaryotic translation initiation factor 6-2-like
103863368 M, Y LOC103863368 mediator of RNA polymerase II transcription subunit 36a
103863563 C, N LOC103863563 ribonucleases P/MRP protein subunit POP1
103863799 O, N LOC103863799 calponin homology domain-containing protein DDB_G0272472
103864062 O, N LOC103864062 casein kinase II subunit beta'-like
103864065 O, N LOC103864065 20S-pre-rRNA D-site endonuclease nob1
103864119 O, Y LOC103864119 casein kinase II subunit beta'-like
103864273 O, N LOC103864273 RNA-binding protein 28-like
103864437 O, N LOC103864437 cell division control protein 48 homolog C-like
103864454 C, C LOC103864454 casein kinase II subunit alpha-4, chloroplastic
103864596 O, K LOC103864596 serine/threonine-protein kinase RIO1
103864762 O, C LOC103864762 GTPase LSG1-1
103866274 O, Y LOC103866274 rRNA-processing protein FCF1 homolog
103866489 O, Y LOC103866489 rRNA-processing protein FCF1 homolog
103866705 O, N LOC103866705 uncharacterized LOC103866705
103866823 O, N LOC103866823 putative casein kinase II subunit beta-4
103867683 M, M LOC103867683 probable RNA 3'-terminal phosphate cyclase-like protein
103868091 O, N LOC103868091 RNA cytidine acetyltransferase 1
103868150 O, Y LOC103868150 NHP2-like protein 1
103868214 C, N LOC103868214 U3 small nucleolar RNA-associated protein 14
103868737 M, M LOC103868737 ribosome maturation protein SBDS-like
103868951 O, N LOC103868951 elongation factor-like GTPase 1
103870219 S, Y LOC103870219 nucleolar protein 56
103870273 O, Y LOC103870273 nucleolar GTP-binding protein 1-like
103870708 O, N LOC103870708 guanine nucleotide-binding protein-like NSN1
103870740 S, N LOC103870740 uncharacterized protein At3g06530-like
103870858 O, C LOC103870858 WD repeat-containing protein 3
103871168 O, N LOC103871168 nuclear/nucleolar GTPase 2
103872183 O, Y LOC103872183 nucleolar GTP-binding protein 1
103872336 O, N LOC103872336 WD repeat-containing protein 43
103872338 M, C LOC103872338 periodic tryptophan protein 2 homolog
103872527 O, Y LOC103872527 serine/threonine-protein kinase rio2-like
103874426 O, N LOC103874426 small RNA degrading nuclease 5
103874558 O, Y LOC103874558 probable nucleolar protein 5-1
108870132 S, Y LOC108870132 WD repeat-containing protein 36-like
108870595 O, Y LOC108870595 H/ACA ribonucleoprotein complex subunit 4-like


List of genes in vvi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
4025010 , ViviCr008
4025031 , ViviCr004
4025065 , ViviCr001
4025070 , ViviCr002
4025077 , ViviCr005
4025079 , ViviCr007
7498722 , 26Srrn
7498744 , 5Srrn
7498754 , 18Srrn
100241010 O, N LOC100241010 NHP2-like protein 1
100241131 M, C LOC100241131 periodic tryptophan protein 2 homolog
100241507 O, N LOC100241507 U3 small nucleolar ribonucleoprotein protein MPP10
100241609 O, N LOC100241609 uncharacterized LOC100241609
100241812 O, Y LOC100241812 60S ribosomal export protein NMD3
100242014 O, N LOC100242014 small RNA degrading nuclease 5
100242237 O, C LOC100242237 GTP-binding nuclear protein Ran-3
100242583 O, N LOC100242583 guanine nucleotide-binding protein-like NSN1
100242719 O, Y LOC100242719 nucleolar protein 6
100243694 O, N LOC100243694 U3 small nucleolar RNA-associated protein 4
100244003 O, N LOC100244003 serine/threonine-protein kinase RIO1
100244318 O, N LOC100244318 U3 small nucleolar RNA-associated protein 18 homolog
100244657 O, Y LOC100244657 midasin
100245020 O, Y LOC100245020 60S ribosomal export protein NMD3
100245323 M, Y LOC100245323 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
100246891 O, N LOC100246891 nuclear/nucleolar GTPase 2
100247365 O, C LOC100247365 GTP-binding nuclear protein Ran-3
100247518 M, C LOC100247518 probable RNA 3'-terminal phosphate cyclase-like protein
100248167 O, Y LOC100248167 elongation factor-like GTPase 1
100248284 M, C LOC100248284 U3 small nucleolar ribonucleoprotein protein IMP4
100248675 O, Y LOC100248675 probable nucleolar protein 5-2
100249005 C, N LOC100249005 ribonucleases P/MRP protein subunit POP1
100249458 O, Y LOC100249458 rRNA-processing protein FCF1 homolog
100250257 O, C LOC100250257 WD repeat-containing protein 3
100250818 C, C LOC100250818 GTP-binding nuclear protein Ran-3
100251263 O, N LOC100251263 oligoribonuclease
100251740 O, N LOC100251740 WD repeat-containing protein 43
100252442 O, Y LOC100252442 NHP2-like protein 1
100252767 M, N LOC100252767 transducin beta-like protein 3
100253475 M, C LOC100253475 (R)-specific enoyl-CoA hydratase
100253568 O, N LOC100253568 5'-3' exoribonuclease 3
100253844 C, Y LOC100253844 ribosome biogenesis protein BMS1 homolog
100254172 O, N LOC100254172 small RNA degrading nuclease 1
100254321 O, Y LOC100254321 nucleolar GTP-binding protein 1
100254404 S, Y LOC100254404 eukaryotic translation initiation factor 6-2
100256070 O, N LOC100256070 uncharacterized protein At3g06530
100256288 O, Y LOC100256288 protein EXPORTIN 1A
100257200 O, N LOC100257200 RNA-binding protein 28
100257250 O, N LOC100257250 probable ribonuclease P/MRP protein subunit POP5
100258019 O, Y LOC100258019 H/ACA ribonucleoprotein complex subunit 4
100258154 C, N LOC100258154 RNA-binding protein NOB1
100258308 C, C LOC100258308 WD repeat-containing protein 75
100258470 O, Y LOC100258470 ribonuclease P protein subunit p29
100258794 O, Y LOC100258794 nucleolar GTP-binding protein 1-like
100258825 O, N LOC100258825 GTPase LSG1-2
100258999 O, M LOC100258999 ribosomal RNA small subunit methyltransferase nep-1
100259091 M, C LOC100259091 ribosome maturation protein SBDS
100259500 S, C LOC100259500 casein kinase II subunit alpha-2
100259524 O, Y LOC100259524 RNA cytidine acetyltransferase 1
100259542 O, N LOC100259542 serine/threonine-protein kinase rio2
100260505 O, N LOC100260505 H/ACA ribonucleoprotein complex subunit 3-like protein
100260745 O, C LOC100260745 ribosomal RNA small subunit methyltransferase nep-1
100260845 S, Y LOC100260845 5'-3' exoribonuclease 3
100261441 O, N LOC100261441 cell division control protein 48 homolog C
100261745 O, Y LOC100261745 U3 small nucleolar ribonucleoprotein protein IMP3
100262569 O, N LOC100262569 putative casein kinase II subunit beta-4
100262741 M, C LOC100262741 casein kinase II subunit alpha
100263222 M, Y LOC100263222 5'-3' exoribonuclease 3
100263244 O, C LOC100263244 nucleolar GTP-binding protein 1
100263441 S, Y LOC100263441 uncharacterized LOC100263441
100263672 O, N LOC100263672 U3 small nucleolar RNA-associated protein 18 homolog
100264761 C, N LOC100264761 protein SLOW WALKER 1
100265155 O, N LOC100265155 protein FAM133A
100265278 O, N LOC100265278 WD repeat-containing protein 43
100266111 O, Y LOC100266111 casein kinase II subunit alpha-2
100266210 O, Y LOC100266210 H/ACA ribonucleoprotein complex subunit 2-like protein
100266267 M, Y LOC100266267 probable mediator of RNA polymerase II transcription subunit 36b
100266615 O, C LOC100266615 U3 small nucleolar RNA-associated protein 21 homolog
100266745 O, N LOC100266745 putative casein kinase II subunit beta-4
100266996 M, C LOC100266996 GTP-binding nuclear protein Ran-3
100267476 O, N LOC100267476 U3 small nucleolar RNA-associated protein 14 homolog A
100267580 O, Y LOC100267580 U3 small nucleolar RNA-associated protein 6 homolog
100267928 O, C LOC100267928 nucleolar protein 56
100854265 C, N LOC100854265 ribonucleases P/MRP protein subunit POP1
104877313 M, C LOC104877313 adenylate kinase isoenzyme 6 homolog
104877333 O, C LOC104877333 uncharacterized LOC104877333
109123153 C, N LOC109123153 ribonucleases P/MRP protein subunit POP1-like
109124100 O, Y LOC109124100 rRNA-processing protein FCF1 homolog


List of genes in ppo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
7453774 O, N LOC7453774 U3 small nucleolar ribonucleoprotein protein MPP10
7454542 O, N LOC7454542 nucleolar protein 56
7454698 O, N LOC7454698 nucleolar protein 56
7454716 O, N LOC7454716 serine/threonine-protein kinase RIO1
7456272 O, Y LOC7456272 RNA cytidine acetyltransferase 1
7457974 O, N LOC7457974 protein SLOW WALKER 1
7458040 C, N LOC7458040 U3 small nucleolar ribonucleoprotein protein MPP10
7458946 O, Y LOC7458946 H/ACA ribonucleoprotein complex subunit 4
7464104 O, Y LOC7464104 ribosomal RNA small subunit methyltransferase nep-1
7464706 M, N LOC7464706 cell division control protein 48 homolog C
7465153 O, Y LOC7465153 nucleolar GTP-binding protein 1
7465848 C, N LOC7465848 20S-pre-rRNA D-site endonuclease nob1
7467445 O, Y LOC7467445 NHP2-like protein 1
7467840 S, N LOC7467840 small RNA degrading nuclease 5
7468378 O, N LOC7468378 glutamic acid-rich protein
7468450 S, Y LOC7468450 eukaryotic translation initiation factor 6-2
7469197 O, N LOC7469197 small RNA degrading nuclease 5
7472654 M, N LOC7472654 WD repeat-containing protein PCN
7473260 M, Y LOC7473260 probable mediator of RNA polymerase II transcription subunit 36b
7473584 O, Y LOC7473584 H/ACA ribonucleoprotein complex subunit 4
7473909 O, C LOC7473909 probable nucleolar protein 5-2
7474066 M, Y LOC7474066 probable mediator of RNA polymerase II transcription subunit 36b
7476826 O, N LOC7476826 uncharacterized LOC7476826
7476885 O, C LOC7476885 U3 small nucleolar RNA-associated protein 18 homolog
7477962 O, Y LOC7477962 U3 small nucleolar RNA-associated protein 6 homolog
7478845 O, N LOC7478845 uncharacterized protein C57A7.06
7479654 C, N LOC7479654 calmodulin-interacting protein 111
7482322 O, Y LOC7482322 nucleolar GTP-binding protein 1
7483093 O, Y LOC7483093 small RNA degrading nuclease 1
7483807 O, N LOC7483807 putative casein kinase II subunit beta-4
7485927 O, N LOC7485927 H/ACA ribonucleoprotein complex subunit 2-like protein
7487225 O, C LOC7487225 U3 small nucleolar RNA-associated protein 21 homolog
7488147 O, N LOC7488147 uncharacterized LOC7488147
7488959 M, C LOC7488959 WD repeat-containing protein 75
7489670 M, Y LOC7489670 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
7489763 O, Y LOC7489763 casein kinase II subunit alpha-2
7489764 O, C LOC7489764 casein kinase II subunit alpha
7491116 O, N LOC7491116 GTPase LSG1-2
7491124 M, M LOC7491124 probable RNA 3'-terminal phosphate cyclase-like protein
7491296 O, N LOC7491296 uncharacterized protein C57A7.06
7492443 M, N LOC7492443 ribosome maturation protein SBDS
7493908 M, N LOC7493908 transducin beta-like protein 3
7493956 S, Y LOC7493956 5'-3' exoribonuclease 3
7495759 O, C LOC7495759 GTP-binding nuclear protein Ran-3
7495760 O, C LOC7495760 GTP-binding nuclear protein Ran-3
7496504 O, N LOC7496504 WD repeat-containing protein 43


List of genes in mtr


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
11406580 O, N LOC11406580 uncharacterized protein C57A7.06
11406641 O, C LOC11406641 60S ribosomal export protein NMD3
11407664 O, Y LOC11407664 ribosome biogenesis protein bms1
11408905 O, N LOC11408905 uncharacterized LOC11408905
11410839 O, N LOC11410839 casein kinase II subunit alpha-2
11410875 O, Y LOC11410875 probable ribonuclease P/MRP protein subunit POP5
11412106 O, Y LOC11412106 RNA cytidine acetyltransferase 1
11413629 O, C LOC11413629 nucleolar protein 6
11414055 O, N LOC11414055 eukaryotic translation initiation factor 6-2
11417189 O, N LOC11417189 WD repeat-containing protein PCN
11417407 O, N LOC11417407 serine/threonine-protein kinase rio1
11417702 O, Y LOC11417702 elongation factor-like GTPase 1
11419905 O, Y LOC11419905 nucleolar GTP-binding protein 1
11420033 O, N LOC11420033 protein SLOW WALKER 1
11420256 O, N LOC11420256 uncharacterized LOC11420256
11421160 M, C LOC11421160 cell division control protein 48 homolog C
11421232 O, Y LOC11421232 WD repeat-containing protein PCN
11421258 O, N LOC11421258 ribosomal RNA small subunit methyltransferase NEP1
11422276 M, Y LOC11422276 U3 small nucleolar ribonucleoprotein protein IMP4
11422352 O, M LOC11422352 ribosomal RNA-processing protein 7 homolog A
11422493 O, N LOC11422493 eukaryotic translation initiation factor 6-2
11423329 O, Y LOC11423329 60S ribosomal export protein NMD3
11423401 O, N LOC11423401 U3 small nucleolar RNA-associated protein 14
11425141 O, N LOC11425141 U3 small nucleolar RNA-associated protein 18 homolog
11425835 M, M LOC11425835 60S ribosomal export protein NMD3
11426394 O, N LOC11426394 RNA-binding protein 28
11426579 O, N LOC11426579 DNA ligase 1
11426774 O, Y LOC11426774 60S ribosomal export protein NMD3
11427335 M, Y LOC11427335 60S ribosomal export protein NMD3
11430161 O, N LOC11430161 casein kinase II subunit beta-1
11430617 O, C LOC11430617 ribosomal RNA small subunit methyltransferase nep-1
11431644 M, C LOC11431644 periodic tryptophan protein 2
11431764 O, Y LOC11431764 rRNA-processing protein FCF1 homolog
11431862 M, M LOC11431862 60S ribosomal export protein NMD3
11431978 C, P LOC11431978 uncharacterized protein At3g06530
11432192 O, Y LOC11432192 rRNA-processing protein FCF1 homolog
11432884 O, C LOC11432884 adenylate kinase isoenzyme 6 homolog
11434046 M, C LOC11434046 midasin
11434455 C, C LOC11434455 casein kinase II subunit alpha-2
11435528 O, Y LOC11435528 protein EXPORTIN 1A
11435776 O, N LOC11435776 RNA-binding protein NOB1
11435791 O, Y LOC11435791 U3 small nucleolar RNA-associated protein 6 homolog
11435888 O, Y LOC11435888 serine/threonine-protein kinase rio1
11436295 M, Y LOC11436295 60S ribosomal export protein NMD3
11436777 S, Y LOC11436777 probable nucleolar protein 5-2
11437421 O, N LOC11437421 ribonuclease P protein subunit p29
11437645 O, Y LOC11437645 probable nucleolar protein 5-1
11437746 O, Y LOC11437746 protein EXPORTIN 1A
11438240 C, C LOC11438240 WD repeat-containing protein 75
11439952 O, Y LOC11439952 RNA cytidine acetyltransferase 1
11440720 M, Y LOC11440720 probable mediator of RNA polymerase II transcription subunit 36b
11440943 O, Y LOC11440943 60S ribosomal export protein NMD3
11441010 M, Y LOC11441010 60S ribosomal export protein NMD3
11441100 M, Y LOC11441100 60S ribosomal export protein NMD3
11441617 O, C LOC11441617 GTP-binding nuclear protein Ran-2
11443631 O, C LOC11443631 H/ACA ribonucleoprotein complex subunit 2-like protein
11444051 O, N LOC11444051 GTPase LSG1-1
11445055 C, N LOC11445055 nuclear/nucleolar GTPase 2
25479574 O, Y LOC25479574 NHP2-like protein 1
25482186 O, Y LOC25482186 small RNA degrading nuclease 1
25482424 C, C LOC25482424 small RNA degrading nuclease 5
25483154 O, N LOC25483154 guanine nucleotide-binding protein-like NSN1
25485636 O, C LOC25485636 ribosomal RNA small subunit methyltransferase nep-1
25487359 O, N LOC25487359 nuclear/nucleolar GTPase 2
25488675 M, C LOC25488675 cell division control protein 48 homolog C
25488676 M, Y LOC25488676 cell division control protein 48 homolog C
25490031 O, C LOC25490031 GTP-binding nuclear protein Ran/TC4
25490032 O, Y LOC25490032 GTP-binding nuclear protein Ran/TC4
25490033 O, C LOC25490033 GTP-binding nuclear protein Ran/TC4
25491287 O, N LOC25491287 ribonucleases P/MRP protein subunit POP1
25491339 O, N LOC25491339 WD repeat-containing protein 43
25492214 O, Y LOC25492214 DEAD-box ATP-dependent RNA helicase 42
25492817 O, Y LOC25492817 H/ACA ribonucleoprotein complex subunit 4
25493398 O, N LOC25493398 serine/threonine-protein kinase rio2
25493524 M, C LOC25493524 casein kinase II subunit alpha
25493577 O, N LOC25493577 casein kinase II subunit beta-1
25493756 O, Y LOC25493756 U3 small nucleolar ribonucleoprotein protein MPP10
25493764 M, N LOC25493764 transducin beta-like protein 3
25494154 O, C LOC25494154 WD repeat-containing protein 3
25494927 O, C LOC25494927 oligoribonuclease
25495057 O, Y LOC25495057 ribosomal RNA small subunit methyltransferase nep-1
25496400 O, Y LOC25496400 probable mediator of RNA polymerase II transcription subunit 36b
25496888 M, C LOC25496888 ribosome maturation protein SBDS
25497027 O, C LOC25497027 U3 small nucleolar RNA-associated protein 21 homolog
25498984 M, Y LOC25498984 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
25499036 O, N LOC25499036 U3 small nucleolar RNA-associated protein 14
25499275 O, N LOC25499275 H/ACA ribonucleoprotein complex subunit 3-like protein
25499910 O, C LOC25499910 nucleolar GTP-binding protein 1
25501480 O, M LOC25501480 H/ACA ribonucleoprotein complex subunit 3-like protein
25502079 M, C_M LOC25502079 probable RNA 3'-terminal phosphate cyclase-like protein


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