KEGG 03018 RNA degradation

113  ath genes in this database.
203  gma genes in this database.
118  sly genes in this database.
112  osa genes in this database.
175  zma genes in this database.
186  bra genes in this database.
104  vvi genes in this database.
64  ppo genes in this database.
102  mtr genes in this database.

List of genes in ath


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
814642 O, P AT2G01130 DEA(D/H)-box RNA helicase family protein
814913 O, C EMB2816 Small nuclear ribonucleoprotein family protein
815269 O, Y HEN2 RNA helicase, ATP-dependent, SK12/DOB1 protein
816257 S, C EMB2763 ribonuclease II family protein
816781 C, C PFK5 phosphofructokinase 5
816867 C, N PAB4 poly(A) binding protein 4
817074 O, N AT2G25355 PNAS-3-like protein
817402 O, N AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein
817505 O, Y ENOC cytosolic enolase
817631 O, N HVT1 helicase in vascular tissue and tapetum
817767 O, Y AT2G32070 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
817816 M, Y AT2G32550 Cell differentiation, Rcd1-like protein
817883 M, M HSP60-2 heat shock protein 60-2
818165 C, C AT2G35920 RNA helicase family protein
818226 O, P LOS2 Enolase
818238 C, C PAB7 poly(A) binding protein 7
818985 O, Y LSM6B Small nuclear ribonucleoprotein family protein
819189 O, C AT2G45810 DEA(D/H)-box RNA helicase family protein
819966 O, Y AT3G07750 3'-5'-exoribonuclease family protein
820485 O, Y RRP45a ribonuclease PH45A
820529 O, C VCR varicose-like protein
820530 O, C VCS Transducin/WD40 repeat-like superfamily protein
820549 C, C Cpn60beta2 TCP-1/cpn60 chaperonin family protein
820599 M, M HSP60-3A heat shock protein 60-3A
820624 O, Y LSM1B Small nuclear ribonucleoprotein family protein
820885 O, N PAB6 poly(A) binding protein 6
821181 C, C RIF10 polyribonucleotide nucleotidyltransferase
821628 C, C AT3G20800 Cell differentiation, Rcd1-like protein
821797 O, N AT3G22270 Topoisomerase II-associated protein PAT1
821983 M, M HSP60 heat shock protein 60
822127 M, C AT3G25430 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
822128 O, C LOH1 RNA-binding CRS1 / YhbY (CRM) domain protein
823549 O, Y AT3G44240 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
823551 O, Y CAF1a Polynucleotidyl transferase, ribonuclease H-like superfamily protein
823705 O, N AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein
823766 O, Y AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein
823849 O, N AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein
824379 C, C PSRP2 RNA-binding (RRM/RBD/RNP motifs) family protein
825025 O, C AT3G58560 DNAse I-like superfamily protein
825027 O, Y AT3G58580 DNAse I-like superfamily protein
825150 O, Y LSM6A Small nuclear ribonucleoprotein family protein
825221 O, Y CER7 3'-5'-exoribonuclease family protein
825296 M, N AT3G61240 DEA(D/H)-box RNA helicase family protein
825335 O, Y RRP41 3'-5'-exoribonuclease family protein
827158 O, N AT4G14990 Topoisomerase II-associated protein PAT1
828042 M, C RH8 RNAhelicase-like 8
828733 O, Y PFK3 phosphofructokinase 3
828858 O, C RRP41L 3'-5'-exoribonuclease family protein
829043 O, C PFK1 phosphofructokinase 1
829105 O, Y VIP3 Transducin/WD40 repeat-like superfamily protein
829350 S, C AT4G32175 PNAS-3-like protein
829420 O, Y PFK6 phosphofructokinase 6
829557 O, N PAB2 poly(A) binding protein 2
829947 M, M mtHsc70-1 mitochondrial heat shock protein 70-1
830371 M, C ABO6 DEA(D/H)-box RNA helicase family protein
830818 M, M MTHSC70-2 mitochondrial HSO70 2
830963 O, Y AT5G10960 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
831138 C, C AT5G12980 Cell differentiation, Rcd1-like protein
831201 O, N DCP2 decapping 2
831309 M, C AT5G14580 polyribonucleotide nucleotidyltransferase
831709 O, Y ABCI20 non-intrinsic ABC protein 9
831941 O, N AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein
832285 O, Y CAF1b Polynucleotidyl transferase, ribonuclease H-like superfamily protein
832579 O, N AT5G25080 Sas10/Utp3/C1D family
832834 O, Y emb1644 Small nuclear ribonucleoprotein family protein
833507 O, N AT5G35430 Tetratricopeptide repeat (TPR)-like superfamily protein
833577 O, N AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein
833880 O, C AT5G38890 Nucleic acid-binding, OB-fold-like protein
834261 O, Y XRN2 exoribonuclease 2
834434 O, N ABCI21 P-loop containing nucleoside triphosphate hydrolases superfamily protein
834832 M, M PFK2 phosphofructokinase 2
834945 O, Y SAD1 Small nuclear ribonucleoprotein family protein
835458 O, N AT5G53770 Nucleotidyltransferase family protein
835751 C, C Cpn60beta3 TCP-1/cpn60 chaperonin family protein
835764 O, Y PFK7 phosphofructokinase 7
836065 O, C AT5G59460 scarecrow-like transcription factor 11 (SCL11)
836092 C, N VIP2 VIRE2 interacting protein 2
836139 O, N AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein
836279 C, C PFK4 phosphofructokinase 4
837157 O, Y AT1G06450 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
837177 O, P NIH nuclear DEIH-boxhelicase
837284 C, N AT1G07705 NOT2 / NOT3 / NOT5 family
837357 O, N DCP1 decapping 1
838162 O, Y AT1G15920 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
838495 O, Y LSM1A Small nuclear ribonucleoprotein family protein
838714 O, Y LSM3A Small nuclear ribonucleoprotein family protein
838882 O, N PAB3 poly(A) binding protein 3
839164 O, C Cpn60beta4 TCP-1/cpn60 chaperonin family protein
839244 O, Y AT1G02080 transcription regulator
839376 O, C ABCI19 P-loop containing nucleoside triphosphate hydrolases superfamily protein
839521 M, C RRP4 ribosomal RNA processing 4
839526 O, Y LSM2 Small nuclear ribonucleoprotein family protein
839676 O, Y AT1G27820 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
839682 O, Y AT1G27890 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
840040 M, M AT1G31500 DNAse I-like superfamily protein
840043 O, K AT1G31530 DNAse I-like superfamily protein
840313 O, N PAB1 poly(A) binding protein 1
841287 C, P AT1G48650 DEA(D/H)-box RNA helicase family protein
841399 S, X PAB8 poly(A) binding protein 8
841886 O, N AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein
841996 C, C CPN60B chaperonin 60 beta
842037 O, N AHG2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
842269 O, N MTR4 RNA helicase, ATP-dependent, SK12/DOB1 protein
842303 O, P AT1G60080 3'-5'-exoribonuclease family protein
842441 O, Y AT1G61470 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
842881 O, Y LSM8 Small nuclear ribonucleoprotein family protein
843507 O, X PAB5 poly(A)-binding protein 5
843741 C, C ENO1 enolase 1
843900 S, Y XRN3 5'-3' exoribonuclease 3
843996 O, N AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein
844021 O, Y LSM3B Small nuclear ribonucleoprotein family protein
844250 O, N AT1G79090 topoisomerase II-associated protein
844417 O, Y AT1G80780 Polynucleotidyl transferase, ribonuclease H-like superfamily protein


List of genes in gma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
547752 O, C LOC547752 enolase
100305778 O, Y LOC100305778 Sm_like superfamily protein
100305829 O, C LOC100305829 uncharacterized LOC100305829
100306112 O, C LOC100306112 uncharacterized LOC100306112
100306352 O, Y LOC100306352 uncharacterized LOC100306352
100306359 O, Y LOC100306359 sm-like protein LSM5
100306498 O, S LOC100306498 uncharacterized LOC100306498
100306547 O, Y LOC100306547 uncharacterized LOC100306547
100499782 O, Y LOC100499782 uncharacterized LOC100499782
100500134 O, M LOC100500134 small nuclear ribonucleoprotein family protein
100500357 O, Y LOC100500357 probable CCR4-associated factor 1 homolog 11
100500463 M, N LOC100500463 uncharacterized LOC100500463
100500667 O, N LOC100500667 uncharacterized LOC100500667
100500671 M, N LOC100500671 uncharacterized LOC100500671
100527929 O, Y LOC100527929 sm-like protein LSM5
100775270 O, C LOC100775270 carbon catabolite repressor protein 4 homolog 1
100775770 M, C LOC100775770 uncharacterized CRM domain-containing protein At3g25440, chloroplastic
100775932 C, C LOC100775932 carbon catabolite repressor protein 4 homolog 4
100776087 O, Y LOC100776087 exosome complex component RRP43
100776358 M, N LOC100776358 exosome complex component RRP4 homolog
100776413 C, N LOC100776413 probable NOT transcription complex subunit VIP2
100776597 C, C_M LOC100776597 ATP-dependent 6-phosphofructokinase 3
100777151 C, N LOC100777151 enhancer of mRNA-decapping protein 4
100777674 C, C LOC100777674 ruBisCO large subunit-binding protein subunit beta, chloroplastic
100778070 C, C LOC100778070 enhancer of mRNA-decapping protein 4
100778661 O, S LOC100778661 putative exosome complex component rrp40
100778879 O, Y LOC100778879 polyadenylate-binding protein 8
100778935 M, M LOC100778935 chaperonin CPN60-like 2, mitochondrial
100779096 O, N LOC100779096 protein PAT1 homolog
100779547 O, N LOC100779547 polyadenylate-binding protein 7
100779830 O, Y LOC100779830 tetratricopeptide repeat protein SKI3
100780081 O, C LOC100780081 mRNA-decapping enzyme-like protein
100780164 C, C LOC100780164 ATP-dependent 6-phosphofructokinase 5, chloroplastic
100780196 O, Y LOC100780196 exosome complex component RRP45A
100780204 O, N LOC100780204 CCR4-NOT transcription complex subunit 3
100780302 O, N LOC100780302 uncharacterized LOC100780302
100780329 O, X LOC100780329 polyadenylate-binding protein 2
100781759 S, C LOC100781759 probable CCR4-associated factor 1 homolog 11
100782166 O, K LOC100782166 ATP-dependent 6-phosphofructokinase 3
100782189 O, N LOC100782189 DExH-box ATP-dependent RNA helicase DExH6
100782386 O, Y LOC100782386 ABC transporter I family member 20
100782456 O, Y LOC100782456 exosome complex exonuclease RRP44 homolog A
100782953 O, Y LOC100782953 exosome complex component RRP41 homolog
100783068 S, Y LOC100783068 5'-3' exoribonuclease 3
100783163 S, X LOC100783163 polyadenylate-binding protein 3
100783361 O, C LOC100783361 mRNA-decapping enzyme-like protein-like
100783415 O, N LOC100783415 CCR4-NOT transcription complex subunit 3
100783567 C, C LOC100783567 RNA recognition motif (RRM) domain-containing protein
100783662 C, N LOC100783662 probable NOT transcription complex subunit VIP2
100783700 S, N LOC100783700 5'-3' exoribonuclease 3
100783935 O, P LOC100783935 CCR4-NOT transcription complex subunit 1
100784442 O, N LOC100784442 polyadenylate-binding protein 2
100784529 O, Y LOC100784529 CCR4-NOT transcription complex subunit 9
100784829 O, N LOC100784829 mRNA decapping complex subunit 2-like
100784997 C, C LOC100784997 poly(A)-specific ribonuclease PARN
100785430 C, C LOC100785430 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
100785683 S, Y LOC100785683 5'-3' exoribonuclease 3
100785694 O, Y LOC100785694 DExH-box ATP-dependent RNA helicase DExH10
100785937 C, M LOC100785937 ruBisCO large subunit-binding protein subunit beta, chloroplastic
100785965 O, N LOC100785965 general negative regulator of transcription subunit 3
100785970 O, Y LOC100785970 probable CCR4-associated factor 1 homolog 7
100786049 O, Y LOC100786049 DExH-box ATP-dependent RNA helicase DExH3
100786833 O, C LOC100786833 mRNA-decapping enzyme-like protein
100786834 O, S LOC100786834 small nuclear RNP family protein
100787112 O, N LOC100787112 protein PAT1 homolog
100787285 M, M LOC100787285 chaperonin CPN60-like 2, mitochondrial
100787451 C, M LOC100787451 enolase 1, chloroplastic
100787648 O, N LOC100787648 protein PAT1 homolog 1
100787663 O, Y LOC100787663 enolase
100788032 O, Y LOC100788032 DEAD-box ATP-dependent RNA helicase 8
100788248 M, M LOC100788248 chaperonin CPN60-2, mitochondrial
100788432 O, Y LOC100788432 DExH-box ATP-dependent RNA helicase DExH11
100788503 O, N LOC100788503 ABC transporter I family member 21
100789125 O, Y LOC100789125 cytosolic enolase 3-like
100789409 O, Y LOC100789409 probable CCR4-associated factor 1 homolog 7
100789536 O, Y_N LOC100789536 sm-like protein LSM7
100790027 O, C LOC100790027 probable CCR4-associated factor 1 homolog 11
100790116 C, K LOC100790116 exosome complex exonuclease RRP46 homolog
100790692 O, N LOC100790692 uncharacterized CRM domain-containing protein At3g25440, chloroplastic
100790793 O, Y LOC100790793 WD repeat-containing protein VIP3
100791006 C, M LOC100791006 DExH-box ATP-dependent RNA helicase DExH3
100791764 O, Y LOC100791764 WD repeat-containing protein VIP3
100791930 O, C LOC100791930 putative exosome complex component rrp40
100792410 C, C LOC100792410 DExH-box ATP-dependent RNA helicase DExH3
100792560 C, C LOC100792560 33 kDa ribonucleoprotein, chloroplastic
100792623 M, C LOC100792623 DExH-box ATP-dependent RNA helicase DExH1
100792752 C, S LOC100792752 CCR4-NOT transcription complex subunit 9
100792784 O, Y LOC100792784 CCR4-NOT transcription complex subunit 9
100792823 M, C LOC100792823 DExH-box ATP-dependent RNA helicase DExH1
100793844 C, Y LOC100793844 ATP-dependent 6-phosphofructokinase 3
100793883 C, C LOC100793883 ATP-dependent 6-phosphofructokinase 5, chloroplastic
100794539 C, C LOC100794539 ATP-dependent 6-phosphofructokinase 5, chloroplastic
100795174 O, N LOC100795174 nuclear nucleic acid-binding protein C1D
100795344 O, Y LOC100795344 ATP-dependent 6-phosphofructokinase 7-like
100795851 O, S LOC100795851 sm-like protein LSM4
100796154 O, Y LOC100796154 exosome complex component CSL4-like
100796464 C, M LOC100796464 ruBisCO large subunit-binding protein subunit beta, chloroplastic
100796614 O, K LOC100796614 ATP-dependent 6-phosphofructokinase 3
100796769 O, Y LOC100796769 ATP-dependent 6-phosphofructokinase 3
100796791 M, M LOC100796791 heat shock 70 kDa protein, mitochondrial
100796804 O, N LOC100796804 uncharacterized LOC100796804
100797699 O, N LOC100797699 enhancer of mRNA-decapping protein 4
100797765 O, Y LOC100797765 sm-like protein LSM6A
100797777 O, Y LOC100797777 probable ATP-dependent DNA helicase RecQ
100798228 C, C LOC100798228 enhancer of mRNA-decapping protein 4
100798365 O, Y LOC100798365 probable CCR4-associated factor 1 homolog 7
100798683 M, P LOC100798683 exosome complex exonuclease RRP44 homolog A
100798684 O, N LOC100798684 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
100798766 O, Y LOC100798766 ATP-dependent 6-phosphofructokinase 3
100798828 S, N LOC100798828 polyadenylate-binding protein 7
100798998 O, Y LOC100798998 polyadenylate-binding protein 3
100799386 O, C LOC100799386 polyadenylate-binding protein 8
100799461 O, Y LOC100799461 probable CCR4-associated factor 1 homolog 7
100800470 O, Y LOC100800470 protein RRP6-like 2
100800861 O, C LOC100800861 DEAD-box ATP-dependent RNA helicase 8
100801266 C, C LOC100801266 CCR4-NOT transcription complex subunit 9
100801402 M, M LOC100801402 DEAD-box ATP-dependent RNA helicase 8
100801484 O, Y LOC100801484 exosome complex exonuclease RRP46 homolog
100801880 O, N LOC100801880 uncharacterized LOC100801880
100801931 S, C LOC100801931 putative exosome complex exonuclease RRP42
100802374 C, C LOC100802374 enhancer of mRNA-decapping protein 4
100802507 O, N LOC100802507 CCR4-NOT transcription complex subunit 10
100802751 O, C LOC100802751 exosome complex component RRP45A
100803008 M, C LOC100803008 poly(A)-specific ribonuclease PARN-like
100803139 O, Y LOC100803139 ATP-dependent 6-phosphofructokinase 3
100803794 C, C LOC100803794 CCR4-NOT transcription complex subunit 1
100803925 O, Y LOC100803925 enolase
100804559 M, M LOC100804559 Hsp 70 family protein
100804671 O, N LOC100804671 polyadenylate-binding protein 7
100804673 O, N LOC100804673 probable ATP-dependent DNA helicase RecQ
100804792 O, N LOC100804792 DExH-box ATP-dependent RNA helicase DExH9
100804872 O, N LOC100804872 protein RRP6-like 2
100805313 O, N LOC100805313 protein PAT1 homolog
100805583 O, C LOC100805583 probable CCR4-associated factor 1 homolog 11
100805811 O, N LOC100805811 uncharacterized LOC100805811
100806141 C, C LOC100806141 DExH-box ATP-dependent RNA helicase DExH3-like
100806538 O, Y LOC100806538 cytosolic enolase 3
100806559 C, N LOC100806559 probable NOT transcription complex subunit VIP2
100806652 O, Y LOC100806652 exosome complex exonuclease RRP44 homolog A
100806953 O, K LOC100806953 exosome complex component RRP42
100807026 C, N LOC100807026 probable NOT transcription complex subunit VIP2
100807057 O, N LOC100807057 polyadenylate-binding protein 7
100807381 O, S LOC100807381 sm-like protein LSM7
100807521 O, N LOC100807521 uncharacterized LOC100807521
100807659 O, N LOC100807659 mRNA decapping complex subunit 2-like
100807957 O, Y LOC100807957 ATP-dependent 6-phosphofructokinase 2
100808217 C, C LOC100808217 poly(A)-specific ribonuclease PARN
100808877 S, C LOC100808877 polyadenylate-binding protein 2
100808902 M, N LOC100808902 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
100808935 O, Y LOC100808935 carbon catabolite repressor protein 4 homolog 1
100809048 O, C LOC100809048 sm-like protein LSM8
100809646 C, M LOC100809646 enolase 1, chloroplastic
100809857 O, Y LOC100809857 exosome complex component CSL4
100809941 O, S LOC100809941 putative exosome complex component rrp40-like
100810272 O, P LOC100810272 DExH-box ATP-dependent RNA helicase DExH6
100811003 M, M LOC100811003 heat shock 70 kDa protein, mitochondrial
100811084 O, C LOC100811084 enolase
100811197 C, C LOC100811197 RNA recognition motif (RRM) domain-containing protein
100811298 O, Y LOC100811298 probable CCR4-associated factor 1 homolog 11
100811302 O, N LOC100811302 enolase 1, chloroplastic
100811320 O, N LOC100811320 non-canonical poly(A) RNA polymerase PAPD7
100811385 O, Y LOC100811385 polyadenylate-binding protein 2
100811995 M, M LOC100811995 chaperonin CPN60-2, mitochondrial
100812139 S, Y LOC100812139 exosome complex component RRP43-like
100812215 O, N LOC100812215 CCR4-NOT transcription complex subunit 10
100812232 O, Y LOC100812232 exosome complex component RRP43
100812441 O, Y LOC100812441 sm-like protein LSM1B
100812450 O, N LOC100812450 protein PAT1 homolog 1
100813427 O, N LOC100813427 uncharacterized LOC100813427
100813735 O, Y LOC100813735 polyadenylate-binding protein 2
100814039 M, M LOC100814039 heat shock 70 kDa protein, mitochondrial
100814161 O, C LOC100814161 mRNA-decapping enzyme-like protein
100815140 O, Y LOC100815140 exosome complex exonuclease RRP46 homolog
100815278 O, Y LOC100815278 ATP-dependent 6-phosphofructokinase 3
100815329 C, N LOC100815329 protein RRP6-like 2
100815676 O, S LOC100815676 putative sm-like protein LSM4
100816271 C, C LOC100816271 exosome complex component RRP41-like
100816982 M, C LOC100816982 polyribonucleotide nucleotidyltransferase 2, mitochondrial
100817163 O, Y LOC100817163 5'-3' exoribonuclease 2-like
100817875 S, C LOC100817875 CCR4 associated factor 1-related protein
100818134 O, Y LOC100818134 exosome complex component RRP42
100818196 M, Y LOC100818196 CCR4-NOT transcription complex subunit 1
100818324 O, Y LOC100818324 exosome complex component RRP41 homolog
100818544 M, M LOC100818544 chaperonin CPN60-2, mitochondrial
100818755 O, Y LOC100818755 ATP-dependent 6-phosphofructokinase 6
100818905 C, M LOC100818905 DEAD-box ATP-dependent RNA helicase 8
100819105 C, C LOC100819105 exosome complex component RRP41-like
100819202 O, N LOC100819202 general negative regulator of transcription subunit 3
100819332 C, N LOC100819332 protein RRP6-like 2
100819369 C, C LOC100819369 ruBisCO large subunit-binding protein subunit beta, chloroplastic
100819402 O, C LOC100819402 carbon catabolite repressor protein 4 homolog 1
100819741 C, C LOC100819741 polyribonucleotide nucleotidyltransferase 1, chloroplastic-like
100820495 C, C LOC100820495 ATP-dependent 6-phosphofructokinase 4, chloroplastic
100820546 M, M LOC100820546 chaperonin CPN60-2, mitochondrial
102664054 O, Y LOC102664054 enolase 1, chloroplastic
102665888 O, Y LOC102665888 sm-like protein LSM2
102667883 S, Y LOC102667883 U6 snRNA-associated Sm-like protein LSm7
102669209 O, N LOC102669209 polyribonucleotide nucleotidyltransferase 2, mitochondrial
106794117 M, C LOC106794117 DEAD-box ATP-dependent RNA helicase 8
106794167 O, N_P LOC106794167 enolase 1, chloroplastic
106798118 O, C LOC106798118 exosome complex component RRP41 homolog
113001216 S, C LOC113001216 CCR4-NOT transcription complex subunit 1-like
113001865 O, Y LOC113001865 mRNA-decapping enzyme subunit 2-like


List of genes in sly


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
544068 O, Y PGH1 enolase
101243815 O, Y LOC101243815 mRNA-decapping enzyme-like protein
101243936 O, N LOC101243936 protein RRP6-like 2
101244620 M, M LOC101244620 heat shock 70 kDa protein, mitochondrial
101244756 O, Y LOC101244756 probable CCR4-associated factor 1 homolog 7
101245480 O, Y LOC101245480 ATP-dependent 6-phosphofructokinase 6
101245783 C, C LOC101245783 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
101245924 O, N LOC101245924 general negative regulator of transcription subunit 3
101245938 O, Y LOC101245938 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like
101246693 O, Y LOC101246693 WD repeat-containing protein
101246918 O, C LOC101246918 exosome complex component CSL4
101247127 O, N LOC101247127 uncharacterized LOC101247127
101247482 O, Y LOC101247482 enolase
101247633 C, N LOC101247633 DExH-box ATP-dependent RNA helicase DExH6
101247742 O, N LOC101247742 mRNA-decapping enzyme-like protein
101247817 O, N LOC101247817 tetratricopeptide repeat protein SKI3
101248085 S, Y LOC101248085 5'-3' exoribonuclease 3-like
101248130 O, Y LOC101248130 probable CCR4-associated factor 1 homolog 9
101248416 O, Y LOC101248416 probable CCR4-associated factor 1 homolog 9
101248632 O, N LOC101248632 polyadenylate-binding protein 7-like
101249588 O, N LOC101249588 CCR4-NOT transcription complex subunit 9-like
101249682 C, N LOC101249682 enhancer of mRNA-decapping protein 4-like
101250035 M, M LOC101250035 poly(A)-specific ribonuclease PARN
101250405 C, C LOC101250405 chaperonin 60 subunit beta 4, chloroplastic
101250449 O, C LOC101250449 exosome complex component RRP41 homolog
101250608 O, Y LOC101250608 sm-like protein LSM2
101250927 M, M LOC101250927 chaperonin CPN60-2, mitochondrial
101251630 O, X LOC101251630 DEAD-box ATP-dependent RNA helicase 8-like
101251854 S, S LOC101251854 sm-like protein LSM1B
101251877 O, N LOC101251877 uncharacterized LOC101251877
101252182 O, N LOC101252182 mRNA-decapping enzyme subunit 2
101252597 O, Y LOC101252597 sm-like protein LSM1B
101252746 O, N LOC101252746 uncharacterized LOC101252746
101253117 C, C LOC101253117 ruBisCO large subunit-binding protein subunit beta, chloroplastic
101253227 O, N LOC101253227 DEAD-box ATP-dependent RNA helicase 8
101253419 O, N ABCI8 ABC transporter I family member 8
101253667 O, N LOC101253667 protein PAT1 homolog
101253771 C, C LOC101253771 ATP-dependent 6-phosphofructokinase 2
101254180 O, Y LOC101254180 sm-like protein LSM1B
101254325 C, C LOC101254325 probable CCR4-associated factor 1 homolog 11
101254498 O, C LOC101254498 mRNA-decapping enzyme-like protein
101255403 M, N LOC101255403 uncharacterized LOC101255403
101255434 O, S LOC101255434 probable U6 snRNA-associated Sm-like protein LSm4
101255473 O, C LOC101255473 carbon catabolite repressor protein 4 homolog 1-like
101256146 M, C LOC101256146 polyribonucleotide nucleotidyltransferase 2, mitochondrial
101256312 M, Y LOC101256312 exosome complex exonuclease RRP46 homolog
101256419 O, Y ABCI2 ABC transporter I family member 2
101256523 O, S LOC101256523 sm-like protein LSM5
101256741 O, Y LOC101256741 probable CCR4-associated factor 1 homolog 7
101256781 C, N LOC101256781 probable NOT transcription complex subunit VIP2
101256818 O, C LOC101256818 carbon catabolite repressor protein 4 homolog 1
101256990 O, Y LOC101256990 CCR4-NOT transcription complex subunit 9-like
101257075 O, N LOC101257075 protein PAT1 homolog 1-like
101257283 O, N LOC101257283 CCR4-NOT transcription complex subunit 9-like
101257307 O, N LOC101257307 DExH-box ATP-dependent RNA helicase DExH9
101257555 O, N LOC101257555 uncharacterized LOC101257555
101258105 O, X LOC101258105 polyadenylate-binding protein 8-like
101258270 O, N LOC101258270 probable CCR4-associated factor 1 homolog 9
101258459 M, C LOC101258459 DEAD-box ATP-dependent RNA helicase 8
101258556 S, Y LOC101258556 5'-3' exoribonuclease 3
101258664 O, Y LOC101258664 probable CCR4-associated factor 1 homolog 6
101258724 C, N LOC101258724 probable NOT transcription complex subunit VIP2
101258986 O, C LOC101258986 sm-like protein LSM7
101259035 C, C LOC101259035 ruBisCO large subunit-binding protein subunit beta, chloroplastic
101259053 O, Y LOC101259053 exosome complex component RRP43-like
101259346 M, C LOC101259346 uncharacterized CRM domain-containing protein At3g25440, chloroplastic
101259554 C, N LOC101259554 nuclear nucleic acid-binding protein C1D
101259840 O, Y LOC101259840 ATP-dependent 6-phosphofructokinase 6-like
101260155 O, Y LOC101260155 WD repeat-containing protein VIP3
101260608 O, N LOC101260608 protein PAT1 homolog 2
101260665 M, C LOC101260665 exonuclease-endonuclease-phosphatase superfamily protein
101260874 C, C LOC101260874 CCR4-NOT transcription complex subunit 9-like
101260939 O, C LOC101260939 exosome complex component RRP41-like
101261492 O, N LOC101261492 DExH-box ATP-dependent RNA helicase DExH10-like
101261596 S, X LOC101261596 polyadenylate-binding protein 2-like
101261705 C, C LOC101261705 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
101262427 O, Y LOC101262427 cytosolic enolase 3
101262526 O, Y LOC101262526 putative exosome complex component rrp40
101262619 O, Y LOC101262619 DExH-box ATP-dependent RNA helicase DExH10
101263320 M, M LOC101263320 chaperonin CPN60-2, mitochondrial
101263393 M, P LOC101263393 DExH-box ATP-dependent RNA helicase DExH3
101263473 O, Y LOC101263473 CCR4-NOT transcription complex subunit 9
101263517 O, Y LOC101263517 exosome complex component RRP45A
101263614 O, G LOC101263614 CCR4-NOT transcription complex subunit 9-like
101263664 M, M LOC101263664 exosome complex exonuclease RRP44 homolog A
101263933 O, Y LOC101263933 ATP-dependent DNA helicase RecQ-like
101264108 S, X LOC101264108 polyadenylate-binding protein 3
101264125 O, Y LOC101264125 DExH-box ATP-dependent RNA helicase DExH11
101264277 O, Y LOC101264277 sm-like protein LSM3A
101264368 M, C LOC101264368 poly(A)-specific ribonuclease PARN-like
101264453 M, C LOC101264453 DExH-box ATP-dependent RNA helicase DExH1
101264455 M, C LOC101264455 DExH-box ATP-dependent RNA helicase DExH3
101264525 O, N LOC101264525 uncharacterized LOC101264525
101264828 O, C LOC101264828 cell differentiation protein rcd1-like
101265516 M, C LOC101265516 CCR4-NOT transcription complex subunit 9
101265626 M, M LOC101265626 chaperonin CPN60-like 2, mitochondrial
101266237 O, N LOC101266237 CCR4-NOT transcription complex subunit 10
101266448 O, N LOC101266448 polyadenylate-binding protein 7
101266704 C, C LOC101266704 ATP-dependent 6-phosphofructokinase 4, chloroplastic
101267058 M, C LOC101267058 exosome complex component RRP4 homolog
101267273 M, M LOC101267273 heat shock 70 kDa protein, mitochondrial
101267392 C, M LOC101267392 enolase 1, chloroplastic
101267415 O, Y LOC101267415 sm-like protein LSM8
101267935 O, N LOC101267935 CCR4-NOT transcription complex subunit 1
101268011 C, C LOC101268011 enhancer of mRNA-decapping protein 4-like
101268034 O, N LOC101268034 nucleotidyltransferase family protein
101268121 O, K LOC101268121 ATP-dependent 6-phosphofructokinase 6
101268243 C, Y LOC101268243 ATP-dependent 6-phosphofructokinase 5, chloroplastic
101268414 O, Y LOC101268414 exosome complex exonuclease RRP42
101268737 O, Y LOC101268737 probable CCR4-associated factor 1 homolog 11
101268752 O, Y LOC101268752 ATP-dependent 6-phosphofructokinase 3-like
101268815 O, N LOC101268815 sm-like protein LSM36B
104647600 M, Y_N LOC104647600 CCR4-NOT transcription complex subunit 9-like
104648404 O, N LOC104648404 cell differentiation protein rcd1-like
104649355 O, Y LOC104649355 sm-like protein LSM2
112941509 S, Y_N LOC112941509 uncharacterized LOC112941509
112941881 O, Y LOC112941881 CCR4-NOT transcription complex subunit 9-like
112941882 C, N LOC112941882 CCR4-NOT transcription complex subunit 9-like


List of genes in osa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
4324917 O, N LOC4324917 putative exosome complex component rrp40
4324952 S, Y LOC4324952 5'-3' exoribonuclease 3
4325074 O, Y LOC4325074 sm-like protein LSM3A
4325469 M, N LOC4325469 uncharacterized LOC4325469
4325502 C, C LOC4325502 DExH-box ATP-dependent RNA helicase DExH6
4325536 O, N LOC4325536 uncharacterized LOC4325536
4325594 O, N LOC4325594 protein PAT1 homolog 1
4325901 M, N LOC4325901 non-canonical poly(A) RNA polymerase PAPD5
4326075 M, C LOC4326075 DExH-box ATP-dependent RNA helicase DExH3
4326227 O, S LOC4326227 probable U6 snRNA-associated Sm-like protein LSm4
4327196 O, K LOC4327196 ATP-dependent 6-phosphofructokinase 6
4327301 O, Y LOC4327301 ATP-dependent 6-phosphofructokinase 6
4327851 O, N LOC4327851 putative exosome complex component rrp40
4327993 C, C LOC4327993 ruBisCO large subunit-binding protein subunit beta, chloroplastic
4328375 O, Y LOC4328375 DExH-box ATP-dependent RNA helicase DExH11
4329076 O, N LOC4329076 protein PAT1 homolog
4329079 O, C LOC4329079 cell differentiation protein rcd1
4329368 C, N LOC4329368 5'-3' exoribonuclease 3
4329449 O, C LOC4329449 U6 snRNA-associated Sm-like protein LSm6
4329480 O, N LOC4329480 protein PAT1 homolog 1
4329627 O, N LOC4329627 exosome complex component RRP45A
4329995 M, C LOC4329995 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
4330120 O, N LOC4330120 DEAD-box ATP-dependent RNA helicase 8-like
4330568 C, C LOC4330568 enhancer of mRNA-decapping protein 4
4330888 M, M LOC4330888 heat shock 70 kDa protein, mitochondrial
4330931 C, N LOC4330931 probable NOT transcription complex subunit VIP2
4331006 O, Y LOC4331006 probable CCR4-associated factor 1 homolog 7
4331069 O, N LOC4331069 mRNA-decapping enzyme subunit 2
4331095 O, N LOC4331095 ABC transporter I family member 19
4331133 O, Y LOC4331133 exosome complex component csl4
4331296 O, N LOC4331296 CCR4-NOT transcription complex subunit 1
4331379 M, M LOC4331379 heat shock 70 kDa protein, mitochondrial
4331494 M, M LOC4331494 exosome complex exonuclease RRP44 homolog A
4331590 M, M LOC4331590 chaperonin CPN60-1, mitochondrial
4331677 O, N LOC4331677 protein RRP6-like 2
4331740 O, C LOC4331740 carbon catabolite repressor protein 4 homolog 1
4332253 O, C LOC4332253 enolase-like
4332356 O, Y LOC4332356 cytosolic enolase 3
4332428 S, N LOC4332428 polyadenylate-binding protein 7
4332655 O, Y LOC4332655 ABC transporter I family member 20
4333598 O, Y LOC4333598 general negative regulator of transcription subunit 3
4334027 C, N LOC4334027 probable NOT transcription complex subunit VIP2
4334111 M, C LOC4334111 DExH-box ATP-dependent RNA helicase DExH3
4334709 M, C LOC4334709 mRNA-decapping enzyme-like protein
4334824 O, C LOC4334824 exosome complex exonuclease RRP46 homolog
4335668 O, Y LOC4335668 transposon Ty3-G Gag-Pol polyprotein
4335888 O, N LOC4335888 ATP-dependent DNA helicase Q-like 4A
4335963 O, Y LOC4335963 sm-like protein LSM1B
4336113 O, Y LOC4336113 ATP-dependent 6-phosphofructokinase 2-like
4336259 M, C LOC4336259 uncharacterized CRM domain-containing protein At3g25440, chloroplastic
4336331 S, X LOC4336331 polyadenylate-binding protein 2
4336421 M, C LOC4336421 exosome complex component RRP4 homolog
4336501 O, N LOC4336501 DEAD-box ATP-dependent RNA helicase 6-like
4336974 C, Y LOC4336974 CCR4-NOT transcription complex subunit 9
4337438 O, N LOC4337438 multiple RNA-binding domain-containing protein 1
4337457 C, Y LOC4337457 probable CCR4-associated factor 1 homolog 11
4338034 O, Y LOC4338034 ATP-dependent 6-phosphofructokinase 6
4338670 O, S LOC4338670 sm-like protein LSM5
4338672 M, C LOC4338672 carbon catabolite repressor protein 4 homolog 4
4339144 C, C LOC4339144 probable NOT transcription complex subunit VIP2
4339369 O, K LOC4339369 ATP-dependent 6-phosphofructokinase 6
4339466 M, C LOC4339466 chaperonin CPN60-like 2, mitochondrial
4339810 O, Y LOC4339810 sm-like protein LSM8
4339910 C, C LOC4339910 ruBisCO large subunit-binding protein subunit beta, chloroplastic
4340042 O, Y LOC4340042 enolase 1
4340153 C, Y LOC4340153 ATP-dependent 6-phosphofructokinase 3
4340825 C, C LOC4340825 enhancer of mRNA-decapping protein 4
4341408 O, N LOC4341408 polyadenylate-binding protein 4-like
4342497 C, C LOC4342497 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
4342837 O, M LOC4342837 mRNA-decapping enzyme-like protein
4343622 C, Y LOC4343622 CCR4-NOT transcription complex subunit 9
4344306 O, C LOC4344306 probable ATP-dependent DNA helicase RecQ
4344519 O, C LOC4344519 exosome complex component RRP41-like
4344686 O, Y LOC4344686 sm-like protein LSM2
4344803 O, S LOC4344803 sm-like protein LSM7
4345136 O, N LOC4345136 nuclear nucleic acid-binding protein C1D
4345242 O, Y LOC4345242 polyadenylate-binding protein 2
4345682 M, M LOC4345682 poly(A)-specific ribonuclease PARN-like
4345683 O, Y LOC4345683 probable CCR4-associated factor 1 homolog 7
4346409 C, N LOC4346409 polyadenylate-binding protein 2
4346428 O, N LOC4346428 CCR4-NOT transcription complex subunit 10
4346519 O, Y LOC4346519 exosome complex component RRP41 homolog
4346605 C, C LOC4346605 30S ribosomal protein 2, chloroplastic
4346906 M, C LOC4346906 enolase 1, chloroplastic
4347060 C, C LOC4347060 ATP-dependent 6-phosphofructokinase 5, chloroplastic
4347066 O, Y LOC4347066 probable CCR4-associated factor 1 homolog 7
4347383 O, Y LOC4347383 ATP-dependent 6-phosphofructokinase 2
4348176 C, C LOC4348176 enolase-like
4348582 C, Y LOC4348582 ATP-dependent 6-phosphofructokinase 5, chloroplastic
4348610 O, C LOC4348610 carbon catabolite repressor protein 4 homolog 1
4348824 C, Y LOC4348824 chaperonin CPN60-2, mitochondrial
4349053 O, X LOC4349053 DEAD-box ATP-dependent RNA helicase 12-like
4349298 O, N LOC4349298 tetratricopeptide repeat protein SKI3
4349535 C, C LOC4349535 uncharacterized LOC4349535
4349816 C, N LOC4349816 mRNA-decapping enzyme-like protein
4349924 O, Y LOC4349924 DExH-box ATP-dependent RNA helicase DExH10
4350355 O, Y LOC4350355 exosome complex component RRP43
4351059 O, Y LOC4351059 WD repeat-containing protein VIP3
4351244 O, N LOC4351244 uncharacterized LOC4351244
4351547 O, C LOC4351547 mRNA-decapping enzyme-like protein
4352037 O, Y LOC4352037 exosome complex component RRP42
9268289 M, C LOC9268289 poly(A)-specific ribonuclease PARN
9268439 C, C LOC9268439 DExH-box ATP-dependent RNA helicase DExH9
9269241 O, C LOC9269241 exosome complex component RRP41-like
9270165 M, M LOC9270165 heat shock 70 kDa protein, mitochondrial
9270208 C, N LOC9270208 protein RRP6-like 2
9270665 O, N LOC9270665 protein PAT1 homolog
9272009 C, S LOC9272009 CCR4-NOT transcription complex subunit 9
9272729 O, N LOC9272729 CCR4-NOT transcription complex subunit 1
107275738 C, M LOC107275738 chaperonin 60 subunit beta 4, chloroplastic
107275860 S, E LOC107275860 CCR4-NOT transcription complex subunit 9
107279834 C, M LOC107279834 chaperonin 60 subunit beta 4, chloroplastic-like


List of genes in zma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
542185 O, C LOC542185 ruBisCO large subunit-binding protein subunit beta, chloroplastic
542316 O, Y LOC542316 enolase 2
542707 M, M LOC542707 mitochondrial chaperonin 60
542736 M, M LOC542736 mitochondrial chaperonin-60
732811 O, Y LOC732811 enolase 1
100191337 O, K LOC100191337 uncharacterized LOC100191337
100191408 M, C LOC100191408 uncharacterized LOC100191408
100191586 O, Y LOC100191586 uncharacterized LOC100191586
100191982 C, K LOC100191982 ATP-dependent 6-phosphofructokinase 2
100192478 O, Y LOC100192478 uncharacterized LOC100192478
100192719 O, C LOC100192719 Small nuclear ribonucleoprotein F
100192788 O, Y LOC100192788 uncharacterized LOC100192788
100192964 O, Y LOC100192964 uncharacterized LOC100192964
100193030 O, Y LOC100193030 CCR4-NOT transcription complex subunit 8
100193137 O, Y LOC100193137 exosome complex exonuclease RRP43
100193338 C, C LOC100193338 uncharacterized LOC100193338
100193495 M, C LOC100193495 RNA-binding CRS1 / YhbY (CRM) domain protein
100193739 O, Y LOC100193739 CCR4-NOT transcription complex subunit 7
100193751 O, Y LOC100193751 uncharacterized LOC100193751
100193927 O, Y LOC100193927 uncharacterized LOC100193927
100194030 O, M LOC100194030 uncharacterized LOC100194030
100194361 O, C LOC100194361 uncharacterized LOC100194361
100194374 O, Y LOC100194374 uncharacterized LOC100194374
100194408 M, N LOC100194408 uncharacterized LOC100194408
100216708 O, M LOC100216708 uncharacterized LOC100216708
100216860 M, C LOC100216860 uncharacterized LOC100216860
100216888 O, Y LOC100216888 uncharacterized LOC100216888
100272259 M, M LOC100272259 Chaperonin CPN60-like 2 mitochondrial
100272282 O, C LOC100272282 uncharacterized LOC100272282
100272651 O, N LOC100272651 uncharacterized LOC100272651
100272835 O, X LOC100272835 putative DEAD-box ATP-dependent RNA helicase family protein
100273922 , LOC100273922 uncharacterized LOC100273922
100274470 C, M LOC100274470 uncharacterized LOC100274470
100276999 O, Y LOC100276999 SnRNP core Sm protein Sm-X5-like protein
100277089 O, N LOC100277089 uncharacterized LOC100277089
100277744 M, N LOC100277744 uncharacterized LOC100277744
100279231 M, C LOC100279231 ATP-dependent 6-phosphofructokinase 5 chloroplastic
100279262 M, C LOC100279262 uncharacterized LOC100279262
100279265 O, Y LOC100279265 Dcp1-like decapping family
100279503 O, N LOC100279503 Topoisomerase II-associated protein PAT1
100279626 O, C LOC100279626 uncharacterized LOC100279626
100279717 O, C LOC100279717 uncharacterized LOC100279717
100279772 M, C LOC100279772 uncharacterized LOC100279772
100280029 S, Y LOC100280029 uncharacterized LOC100280029
100280057 O, C LOC100280057 exosome complex exonuclease RRP46
100280498 C, C LOC100280498 ruBisCO large subunit-binding protein subunit beta
100280518 O, Y LOC100280518 small nuclear ribonucleoprotein LSM1
100280629 O, C LOC100280629 CCR4-NOT transcription complex subunit 6
100280694 C, C LOC100280694 pyrophosphate--fructose 6-phosphate 1-phosphotransferase
100281429 C, C LOC100281429 uncharacterized LOC100281429
100281464 O, Y LOC100281464 6-phosphofructokinase
100281585 O, Y LOC100281585 6-phosphofructokinase 2
100281688 O, Y LOC100281688 6-phosphofructokinase 2
100281965 O, Y LOC100281965 uncharacterized LOC100281965
100282279 O, Y LOC100282279 CCR4-NOT transcription complex subunit 7
100282327 O, Y LOC100282327 exosome complex exonuclease RRP43
100282349 M, C LOC100282349 LSM7-like
100282428 M, C LOC100282428 uncharacterized LOC100282428
100282437 O, C LOC100282437 exosome complex exonuclease RRP40
100282580 O, M LOC100282580 ATP-dependent RNA helicase dhh1
100282788 O, Y LOC100282788 uncharacterized LOC100282788
100282925 O, Y LOC100282925 uncharacterized LOC100282925
100282980 C, C LOC100282980 uncharacterized LOC100282980
100283280 C, C LOC100283280 enolase
100283319 O, S LOC100283319 SAD1
100283799 , LOC100283799 ATP-dependent RNA helicase pseudogene
100283962 O, N LOC100283962 mRNA decapping enzyme 2
100284021 O, Y LOC100284021 uncharacterized LOC100284021
100284434 O, Y LOC100284434 uncharacterized LOC100284434
100285374 M, C LOC100285374 heat shock 70 kDa protein
100285420 S, X LOC100285420 uncharacterized LOC100285420
100285548 C, Y LOC100285548 6-phosphofructokinase
100285873 O, Y LOC100285873 U6 snRNA-associated Sm-like protein LSm4
100285982 O, Y LOC100285982 LSM7-like
100286213 O, S LOC100286213 SAD1
100286241 M, M LOC100286241 heat shock 70 kDa protein
100286339 O, Y LOC100286339 snRNP core Sm protein Sm-X5-like protein
100381531 C, X LOC100381531 Polyadenylate-binding protein 2
100381591 O, N LOC100381591 uncharacterized LOC100381591
100381661 C, N LOC100381661 uncharacterized LOC100381661
100382718 O, C LOC100382718 Exosome complex component RRP41-like
100383056 C, N LOC100383056 uncharacterized LOC100383056
100383212 O, E_P LOC100383212 Tetratricopeptide repeat (TPR)-like superfamily protein
100383372 M, C LOC100383372 Poly(A)-specific ribonuclease PARN
100383542 O, X LOC100383542 uncharacterized LOC100383542
100383807 O, C LOC100383807 uncharacterized LOC100383807
100383823 O, N LOC100383823 Topoisomerase II-associated protein PAT1
100383837 O, N LOC100383837 uncharacterized LOC100383837
100383871 O, Y LOC100383871 uncharacterized LOC100383871
100384257 O, N LOC100384257 RNA binding (RRM/RBD/RNP motifs) family protein
100384291 C, C LOC100384291 uncharacterized LOC100384291
100384304 O, N LOC100384304 uncharacterized LOC100384304
100384536 O, Y LOC100384536 Protein RRP6-like 2
100501093 O, Y LOC100501093 uncharacterized LOC100501093
100501174 O, Y LOC100501174 RNA binding (RRM/RBD/RNP motifs) family protein
100502035 O, X LOC100502035 uncharacterized LOC100502035
100502326 O, Y LOC100502326 enolase
100502409 S, N LOC100502409 uncharacterized LOC100502409
100856959 O, Y LOC100856959 exosome complex exonuclease RRP42
103626486 O, Y LOC103626486 exosome complex component RRP42-like
103627664 C, C LOC103627664 enhancer of mRNA-decapping protein 4
103628374 O, Y LOC103628374 CCR4-NOT transcription complex subunit 1
103628557 O, N LOC103628557 protein RRP6-like 2
103628799 S, N LOC103628799 ruBisCO large subunit-binding protein subunit beta, chloroplastic
103629384 C, C LOC103629384 ruBisCO large subunit-binding protein subunit beta, chloroplastic
103629493 C, Y LOC103629493 ATP-dependent 6-phosphofructokinase 7
103630144 C, Y LOC103630144 ATP-dependent 6-phosphofructokinase 6
103630586 O, N LOC103630586 Topoisomerase II-associated protein PAT1
103630633 O, K LOC103630633 ATP-dependent 6-phosphofructokinase 6
103631112 C, C LOC103631112 enolase 1-like
103631117 O, Y LOC103631117 probable CCR4-associated factor 1 homolog 11
103631416 C, C LOC103631416 probable CCR4-associated factor 1 homolog 11
103631561 O, N LOC103631561 uncharacterized LOC103631561
103631988 C, C LOC103631988 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
103633537 C, M LOC103633537 ruBisCO large subunit-binding protein subunit beta, chloroplastic
103633568 O, C LOC103633568 uncharacterized 103633568
103633816 O, N LOC103633816 uncharacterized LOC103633816
103634230 O, Y LOC103634230 cytosolic enolase 3
103634889 O, N LOC103634889 DExH-box ATP-dependent RNA helicase DExH10
103636416 O, N LOC103636416 mRNA-decapping enzyme subunit 2-like
103638105 C, C LOC103638105 probable CCR4-associated factor 1 homolog 11
103638180 O, C LOC103638180 DExH-box ATP-dependent RNA helicase DExH9
103638336 O, Y LOC103638336 exosome complex component RRP45A
103639307 C, C LOC103639307 polyadenylate-binding protein 7
103639806 C, C LOC103639806 probable CCR4-associated factor 1 homolog 11
103639808 O, C LOC103639808 probable CCR4-associated factor 1 homolog 11
103639812 C, C LOC103639812 probable CCR4-associated factor 1 homolog 11
103639813 C, C LOC103639813 probable CCR4-associated factor 1 homolog 11
103639817 C, C LOC103639817 probable CCR4-associated factor 1 homolog 11
103639820 M, C LOC103639820 probable CCR4-associated factor 1 homolog 11
103640413 C, C LOC103640413 probable CCR4-associated factor 1 homolog 11
103641594 O, K LOC103641594 enolase 1-like
103641822 O, X LOC103641822 polyadenylate-binding protein 2
103642577 C, C LOC103642577 protein RRP6-like 2
103642749 O, Y LOC103642749 protein RRP6-like 1
103642973 O, Y LOC103642973 probable CCR4-associated factor 1 homolog 11
103643360 O, S LOC103643360 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
103643471 C, C LOC103643471 DExH-box ATP-dependent RNA helicase DExH1
103643788 O, Y LOC103643788 CCR4-NOT transcription complex subunit 3
103644768 O, N LOC103644768 tetratricopeptide repeat protein SKI3
103644795 C, Y LOC103644795 probable CCR4-associated factor 1 homolog 11
103645477 O, N LOC103645477 protein RRP6-like 2
103645589 O, Y LOC103645589 exosome complex component RRP45A
103646034 O, Y LOC103646034 enhancer of mRNA-decapping protein 4
103647171 O, N LOC103647171 uncharacterized LOC103647171
103647427 C, C LOC103647427 ATP-dependent 6-phosphofructokinase 5, chloroplastic
103648183 O, Y LOC103648183 probable CCR4-associated factor 1 homolog 9
103648492 O, C LOC103648492 probable CCR4-associated factor 1 homolog 9
103649452 O, C LOC103649452 probable CCR4-associated factor 1 homolog 11
103649455 O, Y LOC103649455 probable CCR4-associated factor 1 homolog 9
103649464 O, Y LOC103649464 probable CCR4-associated factor 1 homolog 9
103649602 O, N LOC103649602 RNA binding (RRM/RBD/RNP motifs) family protein
103649879 M, C LOC103649879 DExH-box ATP-dependent RNA helicase DExH3
103649964 O, Y LOC103649964 5'-3' exoribonuclease 3
103650181 S, V LOC103650181 CCR4-NOT transcription complex subunit 1
103651371 C, M LOC103651371 non-canonical poly(A) RNA polymerase PAPD5
103651400 O, C LOC103651400 putative exosome complex component rrp40
103651596 , LOC103651596 exosome complex component RRP43-like
103652226 O, Y LOC103652226 probable CCR4-associated factor 1 homolog 11
103652295 O, N LOC103652295 protein RRP6-like 2
103653357 O, Y LOC103653357 CCR4-NOT transcription complex subunit 1
103654004 O, Y LOC103654004 enhancer of mRNA-decapping protein 4-like
103654383 O, N LOC103654383 5'-3' exoribonuclease 2
103655031 O, C LOC103655031 probable CCR4-associated factor 1 homolog 9
103655033 O, C LOC103655033 probable CCR4-associated factor 1 homolog 9
103655732 S, S LOC103655732 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
109939159 C, C LOC109939159 probable CCR4-associated factor 1 homolog 11
109939186 O, C LOC109939186 probable CCR4-associated factor 1 homolog 9
109940581 O, C LOC109940581 exosome complex exonuclease RRP46 homolog
109942640 S, C LOC109942640 uncharacterized LOC109942640
109944446 O, N LOC109944446 probable CCR4-associated factor 1 homolog 9
109944447 O, Y LOC109944447 probable CCR4-associated factor 1 homolog 9
109945460 O, Y LOC109945460 probable CCR4-associated factor 1 homolog 9
109945461 O, C LOC109945461 probable CCR4-associated factor 1 homolog 9
109945804 O, Y LOC109945804 probable CCR4-associated factor 1 homolog 11


List of genes in bra


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
103827605 M, C LOC103827605 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
103827616 O, Y LOC103827616 ATP-dependent 6-phosphofructokinase 2
103828020 O, Y LOC103828020 5'-3' exoribonuclease 2
103828555 C, C LOC103828555 uncharacterized CRM domain-containing protein At3g25440, chloroplastic
103828556 M, M LOC103828556 poly(A)-specific ribonuclease PARN-like
103829178 C, M LOC103829178 chaperonin 60 subunit beta 4, chloroplastic
103829199 O, N LOC103829199 DExH-box ATP-dependent RNA helicase DExH9
103829751 O, N LOC103829751 uncharacterized LOC103829751
103829780 C, C LOC103829780 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
103830166 O, C LOC103830166 carbon catabolite repressor protein 4 homolog 1
103830169 O, N LOC103830169 carbon catabolite repressor protein 4 homolog 2-like
103830231 O, Y LOC103830231 sm-like protein LSM36B
103830261 O, Y LOC103830261 exosome complex component RRP45A
103830288 M, N LOC103830288 DEAD-box ATP-dependent RNA helicase 12-like
103830312 O, Y LOC103830312 exosome complex component RRP41 homolog
103830497 O, N LOC103830497 protein PAT1 homolog 1-like
103830597 O, Y LOC103830597 sm-like protein LSM3B
103830833 S, C LOC103830833 polyadenylate-binding protein 5-like
103831065 O, Y LOC103831065 sm-like protein LSM8
103831079 O, Y LOC103831079 exosome complex component CSL4
103831686 O, X LOC103831686 polyadenylate-binding protein 5
103831877 C, C LOC103831877 enolase 1, chloroplastic
103832011 S, Y LOC103832011 5'-3' exoribonuclease 3
103832123 O, N LOC103832123 tetratricopeptide repeat protein SKI3
103832139 O, Y LOC103832139 sm-like protein LSM3B
103832387 O, N LOC103832387 protein PAT1 homolog 1
103832455 O, Y LOC103832455 probable CCR4-associated factor 1 homolog 6
103832584 C, C LOC103832584 ruBisCO large subunit-binding protein subunit beta, chloroplastic
103833806 C, C LOC103833806 carbon catabolite repressor protein 4 homolog 4-like
103833848 O, N LOC103833848 uncharacterized LOC103833848
103834441 O, N LOC103834441 polyadenylate-binding protein 2
103834571 O, C LOC103834571 putative exosome complex component rrp40
103834615 O, N LOC103834615 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
103834665 O, N LOC103834665 uncharacterized LOC103834665
103834702 C, Y LOC103834702 WD repeat-containing protein VIP3-like
103835057 M, M LOC103835057 heat shock 70 kDa protein 9, mitochondrial-like
103835074 C, C LOC103835074 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like
103835691 C, N LOC103835691 polyadenylate-binding protein 3
103835726 O, Y LOC103835726 cell differentiation protein RCD1 homolog
103836395 M, C LOC103836395 mRNA-decapping enzyme-like protein
103836417 M, C LOC103836417 probable NOT transcription complex subunit VIP2
103836597 O, N LOC103836597 ABC transporter I family member 19
103836620 O, Y LOC103836620 sm-like protein LSM2
103836901 O, M LOC103836901 DEAD-box ATP-dependent RNA helicase 8
103836952 O, C LOC103836952 CCR4-NOT transcription complex subunit 1-like
103837076 O, N LOC103837076 nuclear nucleic acid-binding protein C1D-like
103837167 O, S LOC103837167 sm-like protein LSM4
103837268 O, Y LOC103837268 sm-like protein LSM5
103837810 M, C LOC103837810 exosome complex exonuclease RRP44 homolog A
103837888 C, C LOC103837888 ATP-dependent 6-phosphofructokinase 5, chloroplastic
103838559 O, Y LOC103838559 exosome complex component RRP43
103838580 O, N LOC103838580 DExH-box ATP-dependent RNA helicase DExH9
103839200 O, C LOC103839200 ABC transporter I family member 21
103840234 C, C LOC103840234 carbon catabolite repressor protein 4 homolog 4-like
103840343 O, Y LOC103840343 putative CCR4-associated factor 1 homolog 8
103841151 C, C LOC103841151 30S ribosomal protein 2, chloroplastic-like
103841153 C, C LOC103841153 30S ribosomal protein 2, chloroplastic-like
103841733 O, C LOC103841733 carbon catabolite repressor protein 4 homolog 2-like
103841827 O, Y LOC103841827 sm-like protein LSM6A
103841899 M, Y LOC103841899 exosome complex component RRP45A
103841951 M, C LOC103841951 DEAD-box ATP-dependent RNA helicase 12
103841986 O, Y LOC103841986 exosome complex component RRP41 homolog
103842244 O, N LOC103842244 polyadenylate-binding protein 2
103842307 O, Y LOC103842307 sm-like protein LSM1B
103842418 O, N LOC103842418 polyadenylate-binding protein 4-like
103842663 O, Y LOC103842663 sm-like protein LSM1A
103843401 O, N LOC103843401 mRNA-decapping enzyme-like protein
103843553 O, C LOC103843553 probable CCR4-associated factor 1 homolog 1
103843826 O, Y LOC103843826 CCR4-NOT transcription complex subunit 1-like
103844335 O, N LOC103844335 protein RRP6-like 1
103844362 O, X LOC103844362 polyadenylate-binding protein 2
103844513 M, C LOC103844513 exosome complex component RRP4 homolog
103844517 O, Y LOC103844517 sm-like protein LSM2
103844845 O, N LOC103844845 non-canonical poly(A) RNA polymerase PAPD5
103845096 O, Y LOC103845096 ATP-dependent 6-phosphofructokinase 7
103845371 O, N LOC103845371 uncharacterized LOC103845371
103845391 C, N LOC103845391 probable NOT transcription complex subunit VIP2
103845561 O, Y LOC103845561 probable CCR4-associated factor 1 homolog 11
103845854 O, N LOC103845854 CCR4-NOT transcription complex subunit 3
103846134 O, C LOC103846134 chaperonin 60 subunit beta 3, chloroplastic
103846171 O, N LOC103846171 uncharacterized LOC103846171
103846477 M, C LOC103846477 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
103846561 O, N LOC103846561 mRNA-decapping enzyme subunit 2
103846764 O, Y LOC103846764 probable CCR4-associated factor 1 homolog 10
103847246 M, C LOC103847246 DExH-box ATP-dependent RNA helicase DExH3
103847464 O, Y LOC103847464 ABC transporter I family member 20
103848067 O, Y LOC103848067 probable CCR4-associated factor 1 homolog 9
103848533 O, Y LOC103848533 30S ribosomal protein 2, chloroplastic-like
103849117 O, Y LOC103849117 exosome complex component RRP42-like
103849216 O, C LOC103849216 CCR4-NOT transcription complex subunit 10-like
103849237 S, S LOC103849237 CCR4-NOT transcription complex subunit 10-like
103850259 O, C LOC103850259 CCR4-NOT transcription complex subunit 1-like
103850369 M, M LOC103850369 heat shock 70 kDa protein 10, mitochondrial
103850396 O, Y LOC103850396 ATP-dependent 6-phosphofructokinase 6
103850880 C, N LOC103850880 mRNA-decapping enzyme subunit 2-like
103851429 O, Y LOC103851429 probable CCR4-associated factor 1 homolog 11
103851558 C, N LOC103851558 probable NOT transcription complex subunit VIP2
103851578 O, N LOC103851578 uncharacterized LOC103851578
103851815 O, C LOC103851815 ATP-dependent 6-phosphofructokinase 7-like
103852294 O, C LOC103852294 sm-like protein LSM8
103852731 O, Y LOC103852731 polyadenylate-binding protein, cytoplasmic and nuclear-like
103852968 S, Y LOC103852968 5'-3' exoribonuclease 3-like
103853050 O, Y LOC103853050 sm-like protein LSM3B
103853216 O, Y LOC103853216 probable CCR4-associated factor 1 homolog 6
103853257 O, Y LOC103853257 WD repeat-containing protein VIP3
103853791 O, K LOC103853791 ATP-dependent 6-phosphofructokinase 1
103853921 O, C LOC103853921 sm-like protein LSM7
103854566 O, Y LOC103854566 sm-like protein LSM5
103855181 C, C LOC103855181 polyribonucleotide nucleotidyltransferase 1, chloroplastic
103855827 M, M LOC103855827 heat shock 70 kDa protein 10, mitochondrial-like
103855893 O, Y LOC103855893 probable CCR4-associated factor 1 homolog 10
103855988 C, C LOC103855988 cell differentiation protein RCD1 homolog
103856086 M, C LOC103856086 polyribonucleotide nucleotidyltransferase 2, mitochondrial
103856292 O, N LOC103856292 CCR4-NOT transcription complex subunit 3-like
103856293 O, N LOC103856293 CCR4-NOT transcription complex subunit 3-like
103856505 O, Y LOC103856505 probable CCR4-associated factor 1 homolog 11
103856582 O, N LOC103856582 uncharacterized LOC103856582
103856584 O, N LOC103856584 agglutinin-like protein 5
103856612 C, N LOC103856612 probable NOT transcription complex subunit VIP2
103856808 O, Y LOC103856808 ATP-dependent 6-phosphofructokinase 7-like
103856835 M, M LOC103856835 heat shock 70 kDa protein 9, mitochondrial
103856922 C, C LOC103856922 chaperonin 60 subunit beta 3, chloroplastic
103857430 O, Y LOC103857430 cell differentiation protein RCD1 homolog
103857431 O, Y LOC103857431 cell differentiation protein RCD1 homolog
103857477 M, M LOC103857477 chaperonin CPN60, mitochondrial
103857598 C, C LOC103857598 DExH-box ATP-dependent RNA helicase DExH1
103857629 O, Y LOC103857629 bifunctional enolase 2/transcriptional activator
103858860 O, M LOC103858860 DEAD-box ATP-dependent RNA helicase 8-like
103859008 C, C LOC103859008 polyribonucleotide nucleotidyltransferase 1, chloroplastic-like
103859519 C, C LOC103859519 chaperonin 60 subunit beta 2, chloroplastic
103859538 M, M LOC103859538 chaperonin CPN60-like 2, mitochondrial
103859552 O, Y LOC103859552 sm-like protein LSM1B
103860022 M, M LOC103860022 chaperonin CPN60, mitochondrial
103860422 O, X LOC103860422 polyadenylate-binding protein 2-like
103860608 C, C LOC103860608 ATP-dependent 6-phosphofructokinase 4, chloroplastic
103862924 O, Y LOC103862924 sm-like protein LSM6A
103862977 O, Y LOC103862977 carbon catabolite repressor protein 4 homolog 2
103863484 C, C LOC103863484 30S ribosomal protein 2, chloroplastic-like
103863983 O, N LOC103863983 mRNA-decapping enzyme subunit 2-like
103863984 O, Y_N LOC103863984 mRNA-decapping enzyme subunit 2-like
103864009 O, Y LOC103864009 polyadenylate-binding protein, cytoplasmic and nuclear-like
103864463 O, N LOC103864463 polyadenylate-binding protein 4-like
103864844 O, C LOC103864844 polyadenylate-binding protein 6-like
103864897 O, N LOC103864897 uncharacterized LOC103864897
103865072 O, N LOC103865072 DExH-box ATP-dependent RNA helicase DExH6
103865253 M, M LOC103865253 chaperonin CPN60-like 1, mitochondrial
103865412 O, C LOC103865412 CCR4-NOT transcription complex subunit 1-like
103865552 O, Y LOC103865552 bifunctional enolase 2/transcriptional activator
103866006 O, Y LOC103866006 ATP-dependent 6-phosphofructokinase 3
103866240 O, C LOC103866240 DEAD-box ATP-dependent RNA helicase 6
103867212 C, C LOC103867212 exosome complex component RRP41-like
103867274 O, Y LOC103867274 bifunctional enolase 2/transcriptional activator-like
103867556 M, M LOC103867556 chaperonin CPN60-like 1, mitochondrial
103867655 O, Y LOC103867655 cell differentiation protein RCD1 homolog
103867670 O, Y LOC103867670 probable CCR4-associated factor 1 homolog 7
103867932 O, N LOC103867932 DExH-box ATP-dependent RNA helicase DExH6-like
103868025 O, Y LOC103868025 cytosolic enolase 3
103868297 O, N LOC103868297 protein RRP6-like 2
103868514 C, K LOC103868514 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like
103869095 O, N LOC103869095 uncharacterized LOC103869095
103869276 C, Y LOC103869276 cell differentiation protein RCD1 homolog
103869619 O, Y LOC103869619 polyadenylate-binding protein 2-like
103870068 O, Y LOC103870068 sm-like protein LSM1B
103870129 O, Y LOC103870129 chaperonin 60 subunit beta 2, chloroplastic
103870139 O, X LOC103870139 polyadenylate-binding protein 6
103870186 C, N LOC103870186 enhancer of mRNA-decapping protein 4
103870525 O, Y LOC103870525 DExH-box ATP-dependent RNA helicase DExH10
103870639 O, Y LOC103870639 exosome complex component RRP42
103871015 M, M LOC103871015 poly(A)-specific ribonuclease PARN
103871402 O, X LOC103871402 polyadenylate-binding protein 8
103871455 C, C LOC103871455 DExH-box ATP-dependent RNA helicase DExH3
103871463 M, N LOC103871463 protein PAT1 homolog 1
103871522 C, N LOC103871522 probable NOT transcription complex subunit VIP2
103871583 O, N LOC103871583 mRNA-decapping enzyme-like protein
103872392 O, Y LOC103872392 probable CCR4-associated factor 1 homolog 2
103872452 O, N LOC103872452 protein PAT1 homolog 1-like
103872911 O, Y LOC103872911 sm-like protein LSM3A
103873280 O, N LOC103873280 DExH-box ATP-dependent RNA helicase DExH11
103873315 O, Y LOC103873315 exosome complex exonuclease RRP46 homolog
103873411 O, N LOC103873411 uncharacterized protein DDB_G0283357
103873544 O, M LOC103873544 cell differentiation protein RCD1 homolog
103874375 O, N LOC103874375 nuclear nucleic acid-binding protein C1D
103874515 O, S LOC103874515 sm-like protein LSM4
103875380 O, S LOC103875380 sm-like protein LSM7
108870404 M, S LOC108870404 CCR4-NOT transcription complex subunit 10-like
108870590 O, K LOC108870590 CCR4-NOT transcription complex subunit 10-like


List of genes in vvi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
100241111 M, C LOC100241111 DEAD-box ATP-dependent RNA helicase 8
100241190 C, C LOC100241190 enhancer of mRNA-decapping protein 4
100241656 O, C LOC100241656 putative exosome complex component rrp40
100241738 O, S LOC100241738 probable U6 snRNA-associated Sm-like protein LSm4
100241923 O, X LOC100241923 polyadenylate-binding protein 2-like
100242301 C, C LOC100242301 ATP-dependent 6-phosphofructokinase 5, chloroplastic
100242517 C, C LOC100242517 ATP-dependent 6-phosphofructokinase 4, chloroplastic
100242537 O, N LOC100242537 mRNA-decapping enzyme-like protein
100242642 O, Y LOC100242642 bifunctional enolase 2/transcriptional activator-like
100242667 O, S LOC100242667 probable U6 snRNA-associated Sm-like protein LSm4
100243946 C, C LOC100243946 ATP-dependent 6-phosphofructokinase 3
100243947 O, N LOC100243947 nuclear nucleic acid-binding protein C1D
100244105 O, C LOC100244105 DExH-box ATP-dependent RNA helicase DExH3
100244305 M, C LOC100244305 exosome complex component RRP4 homolog
100244356 M, M LOC100244356 chaperonin CPN60
100244870 O, Y LOC100244870 probable CCR4-associated factor 1 homolog 11
100245726 C, C LOC100245726 ATP-dependent 6-phosphofructokinase 5, chloroplastic
100245746 O, K LOC100245746 ATP-dependent 6-phosphofructokinase 6
100246661 O, Y LOC100246661 DExH-box ATP-dependent RNA helicase DExH10
100247782 O, Y LOC100247782 sm-like protein LSM8
100248407 O, Y LOC100248407 probable CCR4-associated factor 1 homolog 7
100248447 M, M LOC100248447 heat shock 70 kDa protein, mitochondrial
100248449 C, N LOC100248449 probable NOT transcription complex subunit VIP2
100248931 C, C LOC100248931 29 kDa ribonucleoprotein A, chloroplastic
100249306 O, Y LOC100249306 probable CCR4-associated factor 1 homolog 9
100249543 O, N LOC100249543 mRNA-decapping enzyme subunit 2
100249828 O, Y LOC100249828 sm-like protein LSM1B
100250028 O, Y LOC100250028 probable CCR4-associated factor 1 homolog 7
100250857 O, Y LOC100250857 sm-like protein LSM1B
100250929 M, M LOC100250929 heat shock 70 kDa protein, mitochondrial
100251252 M, M LOC100251252 chaperonin 60 subunit beta 4, chloroplastic
100251493 M, C LOC100251493 DExH-box ATP-dependent RNA helicase DExH3
100251605 O, K LOC100251605 ATP-dependent 6-phosphofructokinase 2
100251721 O, X LOC100251721 DEAD-box ATP-dependent RNA helicase 8-like
100251840 C, C LOC100251840 exosome complex component RRP41-like
100252028 S, C LOC100252028 DExH-box ATP-dependent RNA helicase DExH1
100252435 C, C LOC100252435 uncharacterized CRM domain-containing protein At3g25440, chloroplastic
100252496 O, C LOC100252496 CCR4-NOT transcription complex subunit 10
100253485 O, Y LOC100253485 probable CCR4-associated factor 1 homolog 9
100253568 O, N LOC100253568 5'-3' exoribonuclease 3
100253599 M, Y LOC100253599 DExH-box ATP-dependent RNA helicase DExH11
100253711 O, N LOC100253711 CCR4-NOT transcription complex subunit 3
100253817 O, Y LOC100253817 exosome complex component RRP43
100253870 O, Y LOC100253870 sm-like protein LSM3B
100254950 O, Y LOC100254950 enolase
100255521 O, N LOC100255521 protein PAT1 homolog 1
100255846 O, Y LOC100255846 polyadenylate-binding protein 2-like
100255985 O, Y LOC100255985 probable CCR4-associated factor 1 homolog 7
100256026 C, C LOC100256026 enolase 1, chloroplastic
100256249 M, C LOC100256249 carbon catabolite repressor protein 4 homolog 4
100256670 O, N LOC100256670 polyadenylate-binding protein 1-like
100256945 S, Y LOC100256945 CCR4-NOT transcription complex subunit 1
100257571 M, C LOC100257571 polyribonucleotide nucleotidyltransferase 2, mitochondrial
100257752 O, Y LOC100257752 WD repeat-containing protein VIP3
100258243 O, Y LOC100258243 DExH-box ATP-dependent RNA helicase DExH9
100258377 M, C LOC100258377 poly(A)-specific ribonuclease PARN
100259006 O, N LOC100259006 non-canonical poly(A) RNA polymerase PAPD5
100259432 O, C LOC100259432 sm-like protein LSM36B
100259555 O, Y LOC100259555 ABC transporter I family member 20
100259801 O, N LOC100259801 tetratricopeptide repeat protein SKI3
100259985 C, C LOC100259985 enhancer of mRNA-decapping protein 4
100260023 O, N LOC100260023 ABC transporter I family member 19
100260829 O, P LOC100260829 DExH-box ATP-dependent RNA helicase DExH6
100260845 S, Y LOC100260845 5'-3' exoribonuclease 3
100261229 O, Y LOC100261229 exosome complex component RRP42
100261590 O, Y LOC100261590 CCR4-NOT transcription complex subunit 1
100261815 C, C LOC100261815 ruBisCO large subunit-binding protein subunit beta, chloroplastic
100262056 O, Y LOC100262056 probable ATP-dependent DNA helicase RecQ
100262105 O, N LOC100262105 mRNA-decapping enzyme-like protein
100262803 O, Y LOC100262803 exosome complex exonuclease RRP46 homolog
100262903 O, X LOC100262903 polyadenylate-binding protein 2
100263065 C, N LOC100263065 polyadenylate-binding protein 3
100263222 M, Y LOC100263222 5'-3' exoribonuclease 3
100263354 C, N LOC100263354 probable NOT transcription complex subunit VIP2
100263832 C, C LOC100263832 ruBisCO large subunit-binding protein subunit beta, chloroplastic
100263947 O, P LOC100263947 uncharacterized LOC100263947
100264518 C, N LOC100264518 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
100264807 O, Y LOC100264807 sm-like protein LSM5
100265488 O, Y LOC100265488 exosome complex component RRP41 homolog
100265580 C, N LOC100265580 protein RRP6-like 2
100265663 O, Y LOC100265663 cytosolic enolase 3
100265692 C, C LOC100265692 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
100265801 O, C LOC100265801 carbon catabolite repressor protein 4 homolog 1
100265860 O, Y LOC100265860 exosome complex component RRP45A
100265941 C, C LOC100265941 cell differentiation protein RCD1 homolog
100266645 C, C LOC100266645 30S ribosomal protein 2, chloroplastic
100266920 M, M LOC100266920 chaperonin CPN60-like 2, mitochondrial
100267046 C, N LOC100267046 cell differentiation protein RCD1 homolog
100267180 O, Y LOC100267180 probable CCR4-associated factor 1 homolog 11
100267264 O, N LOC100267264 general negative regulator of transcription subunit 4
100267367 O, N LOC100267367 uncharacterized LOC100267367
100267544 O, N LOC100267544 polyadenylate-binding protein 7
100267801 O, N LOC100267801 carbon catabolite repressor protein 4 homolog 1
100267869 O, N LOC100267869 protein PAT1 homolog 1
100267912 O, N LOC100267912 exosome complex exonuclease RRP44 homolog A
100853179 S, Y LOC100853179 CCR4-NOT transcription complex subunit 1
100853702 C, C LOC100853702 ATP-dependent 6-phosphofructokinase 5, chloroplastic
100855155 M, C LOC100855155 poly(A)-specific ribonuclease PARN-like
100855332 O, S LOC100855332 sm-like protein LSM7
104878634 O, N LOC104878634 enhancer of mRNA-decapping protein 4-like
104879775 M, Y LOC104879775 sm-like protein LSM2
104880715 O, Y LOC104880715 cell differentiation protein RCD1 homolog
109121673 O, C LOC109121673 polyadenylate-binding protein 8
109123481 O, M LOC109123481 probable NOT transcription complex subunit VIP2


List of genes in ppo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
7453895 C, C LOC7453895 DExH-box ATP-dependent RNA helicase DExH3
7454357 O, N LOC7454357 ABC transporter I family member 19
7454889 C, C LOC7454889 30S ribosomal protein 2, chloroplastic
7454988 O, N LOC7454988 protein PAT1 homolog
7455670 O, Y LOC7455670 probable CCR4-associated factor 1 homolog 7
7456004 O, Y LOC7456004 exosome complex component RRP42
7458031 O, S LOC7458031 putative exosome complex component rrp40
7458458 O, C LOC7458458 enhancer of mRNA-decapping protein 4
7460081 O, Y LOC7460081 mRNA-decapping enzyme-like protein
7461333 O, N LOC7461333 probable CCR4-associated factor 1 homolog 11
7461344 C, C LOC7461344 chaperonin 60 subunit beta 2, chloroplastic
7461759 O, M LOC7461759 DEAD-box ATP-dependent RNA helicase 8
7462802 M, P LOC7462802 exosome complex component RRP4 homolog
7463898 O, Y LOC7463898 sm-like protein LSM8
7464439 M, C LOC7464439 poly(A)-specific ribonuclease PARN-like
7464596 O, N LOC7464596 sm-like protein LSM36B
7464663 O, N LOC7464663 DExH-box ATP-dependent RNA helicase DExH6
7465198 O, Y LOC7465198 ATP-dependent DNA helicase RecQ
7465252 O, N LOC7465252 mRNA-decapping enzyme-like protein
7465293 O, N LOC7465293 uncharacterized LOC7465293
7465489 C, C LOC7465489 carbon catabolite repressor protein 4 homolog 4
7467793 S, X LOC7467793 polyadenylate-binding protein 3
7467989 O, Y_N LOC7467989 exosome complex component RRP45B
7468678 O, Y LOC7468678 probable CCR4-associated factor 1 homolog 7
7469218 O, Y LOC7469218 sm-like protein LSM3B
7469379 C, C LOC7469379 uncharacterized CRM domain-containing protein At3g25440, chloroplastic
7469506 C, P LOC7469506 DExH-box ATP-dependent RNA helicase DExH3
7469680 M, M LOC7469680 heat shock 70 kDa protein, mitochondrial
7469944 M, C LOC7469944 DExH-box ATP-dependent RNA helicase DExH1
7469961 O, Y LOC7469961 probable CCR4-associated factor 1 homolog 11
7470588 O, N LOC7470588 polyadenylate-binding protein 6
7470787 M, M LOC7470787 heat shock 70 kDa protein, mitochondrial
7471193 M, M LOC7471193 chaperonin CPN60-2, mitochondrial
7471701 C, C LOC7471701 enhancer of mRNA-decapping protein 4
7472468 O, C LOC7472468 sm-like protein LSM36B
7473620 O, Y LOC7473620 exosome complex component RRP43
7479883 O, N LOC7479883 mRNA-decapping enzyme subunit 2
7480192 C, Y LOC7480192 ATP-dependent 6-phosphofructokinase 5, chloroplastic
7480371 O, N LOC7480371 protein PAT1 homolog
7481528 O, N LOC7481528 uncharacterized LOC7481528
7481831 O, Y LOC7481831 enolase
7482382 C, C LOC7482382 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
7482777 M, M LOC7482777 chaperonin CPN60-2, mitochondrial
7483228 C, C LOC7483228 chaperonin 60 subunit beta 2, chloroplastic
7484014 O, Y LOC7484014 exosome complex component RRP43
7484647 O, Y LOC7484647 WD repeat-containing protein VIP3
7485515 O, Y LOC7485515 DExH-box ATP-dependent RNA helicase DExH10
7486870 M, V LOC7486870 DExH-box ATP-dependent RNA helicase DExH3
7487078 C, M LOC7487078 enolase 1, chloroplastic
7487549 C, C LOC7487549 poly(A)-specific ribonuclease PARN
7487777 O, S LOC7487777 probable U6 snRNA-associated Sm-like protein LSm4
7488143 O, N LOC7488143 uncharacterized LOC7488143
7489156 O, N LOC7489156 nuclear nucleic acid-binding protein C1D
7490046 O, X LOC7490046 polyadenylate-binding protein 8
7491063 C, C LOC7491063 polyribonucleotide nucleotidyltransferase 1, chloroplastic
7491150 C, C LOC7491150 exosome complex component RRP41-like
7491308 O, S LOC7491308 probable U6 snRNA-associated Sm-like protein LSm4
7492048 O, N LOC7492048 polyadenylate-binding protein 8
7492495 S, N LOC7492495 polyadenylate-binding protein 3
7492754 O, Y LOC7492754 exosome complex component RRP41 homolog
7493956 S, Y LOC7493956 5'-3' exoribonuclease 3
7495641 O, N LOC7495641 protein PAT1 homolog 1
7497342 M, C LOC7497342 poly(A)-specific ribonuclease PARN-like
7497624 C, C LOC7497624 ATP-dependent 6-phosphofructokinase 3


List of genes in mtr


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
11405809 M, C LOC11405809 ATP-dependent 6-phosphofructokinase 5, chloroplastic
11406476 O, N LOC11406476 uncharacterized LOC11406476
11406638 O, Y LOC11406638 exosome complex component RRP42
11406812 M, M LOC11406812 heat shock 70 kDa protein, mitochondrial
11406816 S, Y LOC11406816 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
11407370 O, S LOC11407370 sm-like protein LSM7
11407593 C, G LOC11407593 CCR4-NOT transcription complex subunit 9
11408570 O, Y LOC11408570 DExH-box ATP-dependent RNA helicase DExH10
11410037 O, C LOC11410037 exosome complex component RRP41-like
11410061 O, Y LOC11410061 ABC transporter I family member 20
11410150 M, M LOC11410150 DExH-box ATP-dependent RNA helicase DExH3
11410489 C, C LOC11410489 ATP-dependent 6-phosphofructokinase 4, chloroplastic
11410859 O, M LOC11410859 sm-like protein LSM4
11413833 O, N LOC11413833 probable NOT transcription complex subunit VIP2
11414400 O, C LOC11414400 mRNA-decapping enzyme-like protein
11415742 O, Y LOC11415742 ATP-dependent 6-phosphofructokinase 3
11416580 C, C LOC11416580 carbon catabolite repressor protein 4 homolog 4
11417361 O, N LOC11417361 uncharacterized LOC11417361
11417386 O, Y LOC11417386 uncharacterized LOC11417386
11417778 M, M LOC11417778 chaperonin CPN60-2, mitochondrial
11417779 M, M LOC11417779 chaperonin CPN60-2, mitochondrial
11418070 O, N LOC11418070 probable NOT transcription complex subunit VIP2
11419187 O, C LOC11419187 polyadenylate-binding protein 2
11420271 O, N LOC11420271 sm-like protein LSM6A
11420285 C, N LOC11420285 CCR4-NOT transcription complex subunit 9
11420789 S, C LOC11420789 polyadenylate-binding protein 7
11420842 O, Y LOC11420842 exosome complex component RRP43
11421237 M, M LOC11421237 chaperonin CPN60-like 2, mitochondrial
11421251 O, Y LOC11421251 sm-like protein LSM1B
11421578 O, Y LOC11421578 CCR4-NOT transcription complex subunit 9
11422609 O, Y LOC11422609 exosome complex component RRP41 homolog
11423385 O, N LOC11423385 CCR4-NOT transcription complex subunit 9
11423706 C, C LOC11423706 ATP-dependent 6-phosphofructokinase 5, chloroplastic
11424425 O, Y LOC11424425 CCR4-NOT transcription complex subunit 9
11424426 M, C LOC11424426 DExH-box ATP-dependent RNA helicase DExH1
11424636 O, N LOC11424636 exosome complex exonuclease RRP44 homolog A
11426059 O, M LOC11426059 sm-like protein LSM4
11427502 O, N LOC11427502 DEAD-box ATP-dependent RNA helicase 8
11429426 M, C LOC11429426 uncharacterized CRM domain-containing protein At3g25440, chloroplastic
11429679 O, Y LOC11429679 polyadenylate-binding protein 2
11429926 C, C LOC11429926 CCR4-NOT transcription complex subunit 1
11429946 M, N LOC11429946 DExH-box ATP-dependent RNA helicase DExH6
11430664 O, K LOC11430664 ATP-dependent 6-phosphofructokinase 7
11430696 O, M LOC11430696 sm-like protein LSM4
11431486 O, N LOC11431486 nuclear nucleic acid-binding protein C1D
11431768 O, Y LOC11431768 exosome complex component RRP41 homolog
11432643 O, N LOC11432643 protein RRP6-like 2
11432979 O, N LOC11432979 uncharacterized LOC11432979
11434343 M, M LOC11434343 heat shock 70 kDa protein, mitochondrial
11434760 O, N LOC11434760 polyadenylate-binding protein 7
11434901 M, M LOC11434901 polyribonucleotide nucleotidyltransferase 2, mitochondrial
11436468 O, K LOC11436468 exosome complex exonuclease RRP46 homolog
11436932 O, N LOC11436932 DEAD-box ATP-dependent RNA helicase 8
11437872 O, N LOC11437872 CCR4-NOT transcription complex subunit 3
11438579 O, K LOC11438579 ATP-dependent 6-phosphofructokinase 3
11439988 O, C LOC11439988 putative exosome complex component rrp40
11440749 C, C LOC11440749 30S ribosomal protein 2, chloroplastic
11441855 O, C LOC11441855 exosome complex component RRP45A
11442020 O, Y LOC11442020 sm-like protein LSM2
11442176 O, Y LOC11442176 DExH-box ATP-dependent RNA helicase DExH10
11442340 O, Y LOC11442340 cytosolic enolase 3
11442551 O, N LOC11442551 DExH-box ATP-dependent RNA helicase DExH9
11444866 C, C LOC11444866 enhancer of mRNA-decapping protein 4
11444960 O, N LOC11444960 CCR4-NOT transcription complex subunit 10
11444969 O, Y LOC11444969 sm-like protein LSM1B
11445084 O, X LOC11445084 polyadenylate-binding protein 8
11446185 O, Y LOC11446185 sm-like protein LSM3A
25481490 O, Y LOC25481490 DEAD-box ATP-dependent RNA helicase 8
25482039 C, C LOC25482039 ruBisCO large subunit-binding protein subunit beta, chloroplastic
25482040 C, C LOC25482040 ruBisCO large subunit-binding protein subunit beta, chloroplastic
25483567 O, C LOC25483567 carbon catabolite repressor protein 4 homolog 1
25483569 S, N LOC25483569 carbon catabolite repressor protein 4 homolog 2
25483579 O, Y LOC25483579 carbon catabolite repressor protein 4 homolog 2
25483959 O, Y LOC25483959 exosome complex component RRP45B
25484052 O, N LOC25484052 uncharacterized LOC25484052
25484242 O, N LOC25484242 ABC transporter I family member 21
25484620 O, Y LOC25484620 exosome complex component CSL4
25485028 C, N LOC25485028 polyadenylate-binding protein 3
25485451 C, C LOC25485451 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
25486813 C, C LOC25486813 enolase 1, chloroplastic
25487016 O, N LOC25487016 protein PAT1 homolog
25487017 O, N LOC25487017 protein PAT1 homolog
25487346 O, N LOC25487346 non-canonical poly(A) RNA polymerase PAPD7
25488987 C, C LOC25488987 CCR4-NOT transcription complex subunit 9
25489175 O, N LOC25489175 probable ATP-dependent DNA helicase RecQ
25490151 O, K LOC25490151 ATP-dependent 6-phosphofructokinase 6
25490766 O, N LOC25490766 DExH-box ATP-dependent RNA helicase DExH11
25492462 C, N LOC25492462 probable NOT transcription complex subunit VIP2
25493016 O, Y LOC25493016 sm-like protein LSM8
25493392 O, Y LOC25493392 sm-like protein LSM5
25494198 O, Y LOC25494198 WD repeat-containing protein VIP3
25494344 O, Y LOC25494344 ATP-dependent 6-phosphofructokinase 2
25494462 O, N LOC25494462 tetratricopeptide repeat protein SKI3
25495837 C, N LOC25495837 protein RRP6-like 2
25495945 O, N LOC25495945 mRNA-decapping enzyme subunit 2
25496270 S, N LOC25496270 polyadenylate-binding protein 3
25499092 O, Y LOC25499092 sm-like protein LSM2
25499389 O, Y LOC25499389 enolase
25499412 O, N LOC25499412 mRNA-decapping enzyme-like protein
25501029 O, C LOC25501029 sm-like protein LSM7
25501139 C, C LOC25501139 DExH-box ATP-dependent RNA helicase DExH3
25501205 O, M LOC25501205 sm-like protein LSM4


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