KEGG 04712 Circadian rhythm - plant

36  ath genes in this database.
104  gma genes in this database.
45  sly genes in this database.
35  osa genes in this database.
74  zma genes in this database.
68  bra genes in this database.
72  vvi genes in this database.
25  ppo genes in this database.
57  mtr genes in this database.

List of genes in ath


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
816394 C, N PHYB phytochrome B
816837 C, C AT2G23070 Protein kinase superfamily protein
816838 O, N CKA3 Protein kinase superfamily protein
817134 O, N ELF3 hydroxyproline-rich glycoprotein family protein
817857 O, N COP1 Transducin/WD40 repeat-like superfamily protein
819076 O, N CKB4 casein kinase II beta subunit 4
819242 O, N SPA1 SPA (suppressor of phyA-105) protein family
819292 O, N PRR9 pseudo-response regulator 9
819296 O, N CCA1 circadian clock associated 1
824162 S, V CKA2 casein kinase II, alpha chain 2
825196 O, N CKB3 casein kinase II beta chain 3
826470 O, C CRY1 cryptochrome 1
827484 O, N CKB2 casein kinase II beta chain 2
827785 O, C TSF PEBP (phosphatidylethanolamine-binding protein) family protein
830730 O, N TCP11 TCP family transcription factor
830996 C, N HY5 Basic-leucine zipper (bZIP) transcription factor family protein
831241 O, Y TT4 Chalcone and stilbene synthase family protein
831441 O, N CO B-box type zinc finger protein with CCT domain-containing protein
831793 O, N PRR7 pseudo-response regulator 7
832438 O, C RUP2 Transducin/WD40 repeat-like superfamily protein
832518 O, N PRR5 two-component response regulator-like protein
834754 O, C CKB1 casein kinase II beta chain 1
835301 C, Y RUP1 Transducin/WD40 repeat-like superfamily protein
835842 O, N ZTL Galactose oxidase/kelch repeat superfamily protein
836132 O, N PRR3 pseudo-response regulator 3
836259 O, N TOC1 CCT motif -containing response regulator protein
836364 O, N CDF1 cycling DOF factor 1
836873 S, Y CKA1 casein kinase alpha 1
837479 O, N PIF3 phytochrome interacting factor 3
837483 O, Y PHYA phytochrome A
838883 O, P GI gigantea protein (GI)
839341 O, N LHY Homeodomain-like superfamily protein
839529 O, Y CRY2 cryptochrome 2
842120 O, N PAP1 production of anthocyanin pigment 1
842859 O, Y FT PEBP (phosphatidylethanolamine-binding protein) family protein
843133 O, N FKF1 flavin-binding, kelch repeat, f box 1


List of genes in gma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
547810 M, C_M PHYA phytochrome A
732575 O, Y CHS1 chalcone synthase 1
778086 O, N MYB114 MYB transcription factor MYB114
778143 C, N BZIP69 bZIP transcription factor bZIP69
780540 O, N LCL3 LHY1/CCA1-like protein
100101859 O, N LCL4 LHY1/CCA1-like protein
100170701 O, Y CHS8 chalcone synthase
100233233 O, N CRY1a cryptochrome 1
100233234 O, C LOC100233234 cryptochrome 2
100271888 O, N LCL1 late elongated hypocotyl and circadian clock associated-1-like protein 1
100271889 O, N TOC1 timing of CAB expression 1
100301887 O, N ZTL1 PAS protein ZEITLUPE 1
100301888 O, N ZTL2 clock-associated PAS protein ZEITLUPE 2
100301889 O, Y FKF1 circadian clock-associated FKF1
100775264 O, Y CHS13 chalcone synthase 13
100776388 M, C LOC100776388 casein kinase II subunit alpha
100776980 O, N LOC100776980 protein SPA1-RELATED 2
100777119 O, N LOC100777119 two-component response regulator-like PRR95
100778303 O, N LOC100778303 protein SPA1-RELATED 2
100778957 O, N LOC100778957 transcription factor MYB75
100779044 O, P GIGANTEA protein GIGANTEA
100779346 O, N LOC100779346 two-component response regulator-like APRR5
100779649 O, Y CHS4A chalcone synthase 4a
100780095 O, N LOC100780095 putative casein kinase II subunit beta
100781509 O, Y FT3B flowering locus T-like protein
100781641 O, P LOC100781641 protein GIGANTEA
100782058 O, Y FT5B FLOWERING LOCUS T-like protein
100782271 C, N LOC100782271 transcription factor TCP7
100782897 O, Y CHS7 chalcone synthase 7
100784300 O, N LOC100784300 protein SPA1-RELATED 2
100784315 O, N LOC100784315 putative casein kinase II subunit beta
100784383 O, N LOC100784383 two-component response regulator-like APRR9
100784724 O, N PIF3 bHLH transcription factor PIF3
100784848 O, N LOC100784848 putative casein kinase II subunit beta
100785554 O, Y CHS11 chalcone synthase 11
100785796 O, N PRR3A two-component response regulator PRR3A
100786264 O, N LOC100786264 transcription factor TCP7
100786522 O, N LOC100786522 two-component response regulator-like APRR1
100786551 O, E LOC100786551 cryptochrome-1-like
100787673 O, Y FT2B flowering locus T-like protein 2b
100788038 O, N LOC100788038 protein EARLY FLOWERING 3
100788048 O, Y CHS10 chalcone synthase 10
100788171 O, N LOC100788171 E3 ubiquitin-protein ligase COP1
100789075 O, Y CHS3C chalcone synthase 3
100789357 O, N LOC100789357 putative casein kinase II subunit beta
100790763 M, C E4 phytochrome A
100790997 O, Y CHS9 chalcone synthase 9
100791098 C, C PHYA3 phytochrome A
100791524 O, Y CHS3 chalcone synthase 3
100791698 O, N LOC100791698 two-component response regulator-like PRR95
100792581 O, Y CHS4B chalcone synthase 4b
100793561 O, N ELF3A protein EARLY FLOWERING 3a
100793573 O, N LOC100793573 putative casein kinase II subunit beta-4
100794652 O, C CHS14 chalcone synthase
100794865 C, C LOC100794865 phytochrome B-like
100794974 O, N LOC100794974 transcription factor PIF3
100795254 O, N LOC100795254 transcription factor TCP7
100796933 O, N LOC100796933 two-component response regulator-like APRR7
100796994 C, Y FT5A FLOWERING LOCUS T-like protein
100797839 O, C LOC100797839 cryptochrome-1-like
100799005 O, N LOC100799005 transcription factor TCP7
100799267 O, N LOC100799267 protein SUPPRESSOR OF PHYA-105 1
100799304 O, N LOC100799304 putative casein kinase II subunit beta
100799728 O, N LOC100799728 two-component response regulator-like APRR1
100799831 C, C PHYB phytochrome B-like
100800443 O, N LOC100800443 transcription factor TCP7
100800578 O, P E2 protein GIGANTEA
100802144 O, N LOC100802144 protein SUPPRESSOR OF PHYA-105 1
100802674 O, N LOC100802674 two-component response regulator-like PRR95
100802828 O, N ZTL adagio protein 1
100803909 O, Y FT3A flowering locus T-like protein
100804665 O, N LOC100804665 transcription factor PIF3
100805523 O, N LOC100805523 adagio protein 1
100806454 O, N LOC100806454 two-component response regulator-like APRR7
100808334 O, C FT6 protein flowering locus T6
100808627 O, C LOC100808627 cryptochrome-2-like
100809433 O, Y CHS6 chalcone synthase 6
100809490 O, N LOC100809490 two-component response regulator-like PRR95
100810748 O, N LOC100810748 casein kinase II subunit alpha-2
100811759 O, Y CRY2B cryptochrome-2b
100812253 O, S LOC100812253 adagio protein 3
100813452 O, N LOC100813452 protein SPA1-RELATED 2-like
100813528 O, N LOC100813528 casein kinase II subunit alpha-2
100813635 O, N LOC100813635 protein SPA1-RELATED 3
100813745 O, N LOC100813745 E3 ubiquitin-protein ligase COP1
100813917 O, N LOC100813917 two-component response regulator-like APRR1
100814951 O, Y FT2A phosphatidylethanolamine-binding protein FT2a
100815008 O, S FT1A protein flowering locus T1a
100815428 O, C LOC100815428 cryptochrome-1-like
100815541 O, C FT1B protein flowering locus T1b
100817795 M, M LOC100817795 casein kinase II subunit alpha-4, chloroplastic
100818279 O, N ELF3B protein EARLY FLOWERING 3b
100818543 O, N LOC100818543 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
100819679 M, Y LOC100819679 casein kinase II subunit alpha-2
100820110 O, N LOC100820110 ELF3-like protein 2
100820151 O, N LOC100820151 transcription factor PIF3
100820471 S, C LOC100820471 casein kinase II subunit alpha-1-like
102659557 O, N LOC102659557 transcription factor PIF3
102663074 S, P LOC102663074 chalcone synthase 3
102663657 O, N LOC102663657 ELF3-like protein 2
106794283 O, Y CHS3B chalcone synthase 3
106795466 O, C FT2C flowering locus T 2c
106799718 O, Y CHS5 chalcone synthase 5
111828534 O, N LOC111828534 uncharacterized LOC111828534


List of genes in sly


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
543547 O, N COP1 COP1 homolog
543596 O, N CRY2 cryptochrome 2
543688 M, C Cry1b cryptochrome 1b
543733 C, N HY5 THY5 protein
544176 M, N phyA Phytochrome A
544219 O, C CRY1a cryptochrome 1
778294 O, Y CHS1 chalcone synthase
778295 M, Y CHS2 chalcone synthase
100736457 O, N TCP14 TCP transcription factor 14
100736520 O, N TCP15 TCP transcription factor 15
101244750 O, Y LOC101244750 casein kinase II subunit alpha-2
101245061 O, C LOC101245061 chalcone synthase B
101245619 O, N LOC101245619 protein HEADING DATE 3B-like
101245655 O, N LOC101245655 putative casein kinase II subunit beta-4
101246029 O, Y SFT protein single flower truss
101246108 C, C LOC101246108 casein kinase II subunit alpha
101246833 O, N LOC101246833 casein kinase II subunit beta-3
101249027 O, N LOC101249027 protein SUPPRESSOR OF PHYA-105 1-like
101249224 O, N LOC101249224 two-component response regulator-like PRR73
101249698 O, N LOC101249698 E3 ubiquitin-protein ligase COP1-like
101249856 O, N LOC101249856 putative casein kinase II subunit beta-4
101250283 O, N LOC101250283 two-component response regulator-like APRR5
101254785 O, C LOC101254785 two-component response regulator-like PRR37
101255788 O, P LOC101255788 protein GIGANTEA
101256338 O, Y LOC101256338 casein kinase II subunit alpha-1
101256908 O, N LOC101256908 adagio protein 3
101257119 O, N LOC101257119 putative casein kinase II subunit beta-4
101258346 O, N LOC101258346 protein GIGANTEA-like
101259163 O, N LOC101259163 two-component response regulator-like APRR1
101259349 C, C PHYF phytochrome F
101259391 O, C LOC101259391 COP1-like protein
101259425 O, N LOC101259425 two-component response regulator-like APRR1
101261662 O, N LOC101261662 protein LHY
101262617 O, Y SP6A protein SELF PRUNING 6A
101262847 M, N PHYB1 phytochrome B1
101262866 O, N LOC101262866 two-component response regulator-like APRR9
101262932 O, N LOC101262932 adagio protein 1
101263032 O, Y LOC101263032 chalcone synthase J
101263834 O, N LOC101263834 protein SPA1-RELATED 2
101264523 C, C PHYB2 phytochrome B2
101265040 O, N LOC101265040 ELF3-like protein 2
101266107 O, Y LOC101266107 chalcone synthase J-like
101267355 O, N LOC101267355 transcription factor PIF3
101267430 O, N LOC101267430 protein EARLY FLOWERING 3
101268174 O, N LOC101268174 protein EARLY FLOWERING 3


List of genes in osa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
4324585 C, C LOC4324585 protein RICE FLOWERING LOCUS T 1-like
4325329 O, N LOC4325329 protein GIGANTEA-like
4327931 O, N LOC4327931 ELF3-like protein 2
4328662 C, N LOC4328662 transcription factor HY5
4329738 O, Y LOC4329738 cryptochrome-1
4330000 O, N LOC4330000 two-component response regulator-like PRR1
4330868 O, N LOC4330868 E3 ubiquitin-protein ligase COP1
4332003 O, Y LOC4332003 casein kinase II subunit alpha-2
4332464 O, N LOC4332464 two-component response regulator-like PRR73
4332623 M, C LOC4332623 phytochrome B-like
4333930 M, C LOC4333930 phytochrome A-like
4334206 M, C LOC4334206 casein kinase II subunit alpha-2
4336008 O, Y LOC4336008 cryptochrome-1
4336228 O, Y LOC4336228 protein FLOWERING LOCUS T
4339663 O, N LOC4339663 protein SUPPRESSOR OF PHYA-105 1
4340185 O, C LOC4340185 protein HEADING DATE 3A-like
4341272 O, Y LOC4341272 protein FLOWERING LOCUS T
4341923 O, Y LOC4341923 adagio-like protein 1
4342248 O, N LOC4342248 casein kinase II subunit alpha-2
4342725 O, Y LOC4342725 chalcone synthase 2
4343287 O, N LOC4343287 putative casein kinase II subunit beta-4
4344399 O, N LOC4344399 two-component response regulator-like PRR37
4344703 O, N LOC4344703 protein LHY
4347674 O, N LOC4347674 two-component response regulator-like PRR95
4349414 O, N LOC4349414 putative casein kinase II subunit beta-4
4349831 O, N LOC4349831 two-component response regulator-like APRR3
4350636 O, Y LOC4350636 chalcone synthase 1-like
4350698 O, Y_N LOC4350698 adagio-like protein 3
9268282 O, Y LOC9268282 protein FLOWERING LOCUS T
9270575 M, N LOC9270575 cryptochrome-1
9271430 O, Y LOC9271430 protein FLOWERING LOCUS T
107276210 O, Y LOC107276210 protein TWIN SISTER of FT
107277483 C, C LOC107277483 transcription factor TCP21
107279948 O, Y LOC107279948 WD repeat-containing protein RUP2
107280190 O, Y LOC107280190 protein FLOWERING LOCUS T-like


List of genes in zma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
541823 O, N LOC541823 CK2 regulatory subunit B1
541824 O, N LOC541824 casein kinase II subunit beta-4
541825 O, Y LOC541825 protein kinase CK2 catalytic subunit CK2 alpha-3
542460 S, C LOC542460 CK2 protein kinase alpha 2
542628 O, N LOC542628 uncharacterized LOC542628
542637 O, Y LOC542637 Casein kinase II subunit alpha
100127523 O, Y ZCN14 ZCN14 protein
100127524 O, Y LOC100127524 uncharacterized LOC100127524
100127525 O, Y LOC100127525 ZCN16 protein
100127526 O, Y LOC100127526 ZCN17 protein
100127527 O, Y LOC100127527 ZCN18 protein
100127528 O, Y LOC100127528 ZCN19 protein
100127529 O, Y LOC100127529 protein TWIN SISTER of FT
100127530 O, Y LOC100127530 uncharacterized LOC100127530
100127539 O, C LOC100127539 uncharacterized LOC100127539
100147733 O, N LOC100147733 uncharacterized LOC100147733
100192868 O, N LOC100192868 uncharacterized LOC100192868
100192956 C, N LOC100192956 uncharacterized LOC100192956
100193188 M, C LOC100193188 uncharacterized LOC100193188
100194126 M, C LOC100194126 cryptochrome2
100216856 O, C LOC100216856 F10K1.23
100272683 O, N LOC100272683 uncharacterized LOC100272683
100272803 O, N LOC100272803 uncharacterized LOC100272803
100273598 O, N LOC100273598 Two-component response regulator-like APRR9
100274243 O, N LOC100274243 uncharacterized LOC100274243
100274415 O, Y LOC100274415 chalcone synthase
100277533 O, C LOC100277533 uncharacterized LOC100277533
100278144 C, N LOC100278144 uncharacterized LOC100278144
100279342 O, N LOC100279342 E3 ubiquitin-protein ligase COP1
100279726 O, Y LOC100279726 Adagio protein 3
100279991 M, C LOC100279991 uncharacterized LOC100279991
100280240 O, N LOC100280240 PseuodARR-B transcription factor
100281091 O, N LOC100281091 LHY protein
100281433 O, N LOC100281433 uncharacterized LOC100281433
100282642 O, Y LOC100282642 chalcone synthase
100283448 O, N LOC100283448 casein kinase II subunit beta-4
100284201 O, N LOC100284201 uncharacterized LOC100284201
100285170 O, N LOC100285170 two-component response regulator-like PRR95
100286122 O, N LOC100286122 ubiquitin ligase protein COP1
100286123 C, N LOC100286123 uncharacterized LOC100286123
100381775 O, N LOC100381775 Two-component response regulator-like APRR9
100381811 C, C LOC100381811 phytochromeB2
100382453 O, N LOC100382453 uncharacterized LOC100382453
100383534 O, N LOC100383534 uncharacterized LOC100383534
100383702 C, C LOC100383702 Phytochrome B
100383828 M, N LOC100383828 uncharacterized LOC100383828
100384276 O, N LOC100384276 Protein SUPPRESSOR OF PHYA-105 1
100384475 O, Y LOC100384475 uncharacterized LOC100384475
100502533 O, Y LOC100502533 cryptochrome 2
100526751 O, N LOC100526751 TOC1b
103625865 S, Y LOC103625865 casein kinase II subunit alpha-2
103626364 O, N LOC103626364 adagio-like protein 1
103626521 C, N LOC103626521 WD repeat-containing protein RUP2
103626626 O, N LOC103626626 putative adagio-like protein 2
103627461 O, N LOC103627461 transcription factor TCP21
103628561 O, Y LOC103628561 protein FLOWERING LOCUS T
103629610 O, N LOC103629610 adagio-like protein 1
103629618 O, Y LOC103629618 casein kinase II subunit alpha-like
103630791 O, N LOC103630791 ELF3-like protein 2
103633010 O, Y LOC103633010 protein FLOWERING LOCUS T
103633607 O, N LOC103633607 two-component response regulator-like PRR37
103633683 M, C LOC103633683 two-component response regulator-like PRR1
103634871 C, N LOC103634871 transcription factor HY5
103635349 O, N LOC103635349 protein SUPPRESSOR OF PHYA-105 1
103636754 M, C LOC103636754 phytochrome A type 5
103638645 O, N LOC103638645 transcription factor HY5
103641361 C, N LOC103641361 transcription factor APG
103641861 M, C LOC103641861 transcription factor PCF1
103643916 M, C LOC103643916 phytochrome A-like
103644048 M, C LOC103644048 uncharacterized LOC103644048
103647963 O, N LOC103647963 two-component response regulator-like PRR37
103648678 O, N LOC103648678 two-component response regulator-like PRR1
103651094 O, N LOC103651094 two-component response regulator-like PRR1
109942013 O, Y LOC109942013 casein kinase II subunit alpha-4, chloroplastic


List of genes in bra


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
103249166 O, P LOC103249166 protein GIGANTEA
103249168 O, N LOC103249168 protein EARLY FLOWERING 3
103827764 O, N LOC103827764 casein kinase II subunit alpha-2
103827864 O, N LOC103827864 casein kinase II subunit beta-1
103830251 O, N LOC103830251 casein kinase II subunit beta-3
103831057 O, Y LOC103831057 protein TWIN SISTER of FT-like
103832146 O, C LOC103832146 protein TWIN SISTER of FT-like
103833904 O, N LOC103833904 protein SPA1-RELATED 2
103836576 O, C LOC103836576 cryptochrome-2
103836661 O, N LOC103836661 protein LHY-like
103836794 O, Y LOC103836794 chalcone synthase 3-like
103837062 O, N LOC103837062 two-component response regulator-like APRR5
103837378 O, N LOC103837378 two-component response regulator-like APRR1
103838805 O, C CRY1 cryptochrome circadian clock 1
103839184 M, N LOC103839184 transcription factor HY5-like
103840918 S, C LOC103840918 casein kinase II subunit alpha-like
103841878 O, N LOC103841878 casein kinase II subunit beta-3-like
103842445 C, C LOC103842445 casein kinase II subunit alpha-4, chloroplastic
103843346 C, C LOC103843346 phytochrome A-like
103843349 O, N LOC103843349 transcription factor PIF3-like
103844260 M, C LOC103844260 cryptochrome-2
103844616 O, N LOC103844616 protein LHY
103845423 O, N LOC103845423 two-component response regulator-like APRR3
103846381 O, N LOC103846381 zinc finger protein CONSTANS
103846527 O, Y LOC103846527 chalcone synthase 1
103846737 C, N HY5 transcription factor HY5
103847150 O, N LOC103847150 transcription factor TCP21-like
103847424 O, N LOC103847424 two-component response regulator-like APRR7
103850461 O, N LOC103850461 two-component response regulator-like APRR7
103850694 O, N LOC103850694 transcription factor TCP21-like
103850763 C, N LOC103850763 transcription factor HY5-like
103850907 O, Y LOC103850907 chalcone synthase 3-like
103852241 O, C LOC103852241 protein FLOWERING LOCUS T
103853778 O, N LOC103853778 casein kinase II subunit beta-1
103854548 O, Y LOC103854548 chalcone synthase-like
103854859 O, N LOC103854859 two-component response regulator-like APRR5
103854905 M, N LOC103854905 transcription factor TCP7
103855006 O, N LOC103855006 cyclic dof factor 1-like
103855586 O, N LOC103855586 casein kinase II subunit beta'-like
103855775 O, N LOC103855775 transcription factor TCP21
103856040 O, Y LOC103856040 chalcone synthase 3-like
103857138 C, N LOC103857138 WD repeat-containing protein RUP1
103858139 O, N LOC103858139 putative casein kinase II subunit beta-4
103858211 O, N LOC103858211 protein SUPPRESSOR OF PHYA-105 1-like
103859717 M, C LOC103859717 transcription factor HY5-like
103860589 O, N LOC103860589 two-component response regulator-like APRR1
103860926 O, N LOC103860926 casein kinase II subunit beta'
103864062 O, N LOC103864062 casein kinase II subunit beta'-like
103864119 O, Y LOC103864119 casein kinase II subunit beta'-like
103864454 C, C LOC103864454 casein kinase II subunit alpha-4, chloroplastic
103864705 O, N LOC103864705 protein EARLY FLOWERING 3
103865236 O, C LOC103865236 E3 ubiquitin-protein ligase COP1-like
103865427 O, M LOC103865427 transcription factor TCP7-like
103865631 O, N LOC103865631 WD repeat-containing protein RUP2
103866306 O, N LOC103866306 two-component response regulator-like APRR9
103866432 O, N LOC103866432 two-component response regulator-like APRR9
103866477 O, N LOC103866477 protein SUPPRESSOR OF PHYA-105 1
103866823 O, N LOC103866823 putative casein kinase II subunit beta-4
103867588 O, N LOC103867588 E3 ubiquitin-protein ligase COP1
103868296 C, N LOC103868296 phytochrome C
103868459 O, C LOC103868459 protein SPA1-RELATED 4
103869673 O, N LOC103869673 transcription factor HY5-like
103869720 O, N LOC103869720 phytochrome B
103871725 M, N LOC103871725 transcription factor PIF3
103871728 M, C LOC103871728 phytochrome A
103874198 O, N LOC103874198 transcription factor TCP7-like
103874318 O, N LOC103874318 two-component response regulator-like APRR5
103874677 O, N LOC103874677 cyclic dof factor 1


List of genes in vvi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
100232843 O, Y CHS chalcone synthase
100232994 O, Y FT flowering locus T
100240824 M, N PHYA phytochrome A
100240862 O, Y LOC100240862 stilbene synthase 2
100241164 O, Y LOC100241164 stilbene synthase 6-like
100242903 O, Y LOC100242903 stilbene synthase 4
100244220 O, Y LOC100244220 stilbene synthase 2-like
100244508 O, N LOC100244508 adagio protein 1
100244710 O, Y LOC100244710 stilbene synthase 1-like
100245181 O, Y LOC100245181 stilbene synthase 5
100246063 O, N LOC100246063 E3 ubiquitin-protein ligase COP1
100246283 O, C LOC100246283 stilbene synthase 5
100246836 O, N LOC100246836 two-component response regulator-like PRR37
100247664 O, N LOC100247664 cryptochrome-1
100247781 O, N LOC100247781 transcription factor PIF3
100248310 O, N LOC100248310 E3 ubiquitin-protein ligase COP1
100248612 M, Y LOC100248612 chalcone synthase
100249144 O, N LOC100249144 adagio protein 1
100249839 O, Y LOC100249839 stilbene synthase 3
100250535 M, N LOC100250535 protein LHY
100251425 O, Y LOC100251425 stilbene synthase 1-like
100253166 O, Y LOC100253166 stilbene synthase 1
100253181 O, N LOC100253181 transcription factor TCP7
100253874 O, N LOC100253874 transcription factor PIF3
100253885 O, N LOC100253885 two-component response regulator-like APRR9
100254022 O, C LOC100254022 cryptochrome-1
100254045 O, Y LOC100254045 stilbene synthase 4-like
100254197 O, P LOC100254197 protein GIGANTEA
100255961 O, N LOC100255961 protein EARLY FLOWERING 3
100255972 O, Y_N LOC100255972 adagio protein 3
100256592 O, N LOC100256592 protein EARLY FLOWERING 3
100256812 O, N LOC100256812 protein SUPPRESSOR OF PHYA-105 1
100256937 O, N LOC100256937 two-component response regulator-like PRR37
100257085 O, N LOC100257085 protein SPA1-RELATED 2
100257557 O, Y LOC100257557 WD repeat-containing protein RUP2-like
100258014 C, C_M LOC100258014 phytochrome C
100258106 O, Y CHS3 chalcone synthase
100258294 O, Y LOC100258294 stilbene synthase 1-like
100258790 O, N LOC100258790 two-component response regulator-like APRR1
100259500 S, C LOC100259500 casein kinase II subunit alpha-2
100259991 O, Y LOC100259991 stilbene synthase 4-like
100261156 M, Y LOC100261156 chalcone synthase
100261472 C, N LOC100261472 transcription factor HY5-like
100261661 O, Y LOC100261661 stilbene synthase 1
100261882 M, C LOC100261882 phytochrome B
100262321 O, Y LOC100262321 stilbene synthase 2
100262569 O, N LOC100262569 putative casein kinase II subunit beta-4
100262691 O, Y LOC100262691 WD repeat-containing protein RUP2-like
100262741 M, C LOC100262741 casein kinase II subunit alpha
100263437 O, Y LOC100263437 stilbene synthase 1
100263443 O, Y CHS chalcone synthase
100264173 O, Y LOC100264173 stilbene synthase 5-like
100264844 O, Y LOC100264844 stilbene synthase 5
100265291 O, Y RS resveratrol synthase
100265568 O, N MYBA7 R2R3 MYB transcription factor
100266111 O, Y LOC100266111 casein kinase II subunit alpha-2
100266562 O, Y LOC100266562 stilbene synthase 2
100266745 O, N LOC100266745 putative casein kinase II subunit beta-4
100266849 O, Y LOC100266849 stilbene synthase 6
100267962 M, Y LOC100267962 chalcone synthase-like
100852886 O, Y LOC100852886 stilbene synthase 1
100853219 O, N LOC100853219 two-component response regulator-like APRR5
100853526 O, Y LOC100853526 stilbene synthase 4-like
100853590 O, Y LOC100853590 stilbene synthase 4-like
100853708 O, Y LOC100853708 stilbene synthase 4-like
100853745 O, Y LOC100853745 stilbene synthase 4-like
100853820 O, Y LOC100853820 stilbene synthase 4-like
100854415 M, Y LOC100854415 stilbene synthase 3
100855299 O, Y LOC100855299 stilbene synthase 2
104879018 C, N LOC104879018 transcription factor HY5
109121404 O, Y LOC109121404 stilbene synthase 4-like
109124132 O, Y LOC109124132 stilbene synthase 3-like


List of genes in ppo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
7454503 O, N LOC7454503 WD repeat-containing protein RUP2
7458626 O, N LOC7458626 two-component response regulator-like PRR37
7459749 O, Y LOC7459749 adagio protein 3
7466313 O, C LOC7466313 chalcone synthase
7468530 O, N LOC7468530 E3 ubiquitin-protein ligase COP1
7470724 O, N LOC7470724 protein EARLY FLOWERING 3
7471583 C, N LOC7471583 transcription factor HY5
7472463 O, C LOC7472463 protein HEADING DATE 3A
7477210 O, N LOC7477210 transcription factor HY5-like
7482913 M, N LOC7482913 adagio protein 3
7483807 O, N LOC7483807 putative casein kinase II subunit beta-4
7484386 O, Y LOC7484386 WD repeat-containing protein RUP2
7485825 M, C LOC7485825 phytochrome B
7485902 M, C LOC7485902 phytochrome B
7486597 O, C LOC7486597 cryptochrome-1
7486808 O, N LOC7486808 two-component response regulator-like APRR9
7486837 O, N LOC7486837 transcription factor PIF3
7486993 O, Y LOC7486993 chalcone synthase
7487745 O, N LOC7487745 two-component response regulator-like APRR5
7488958 O, N LOC7488958 adagio protein 1
7489763 O, Y LOC7489763 casein kinase II subunit alpha-2
7489764 O, C LOC7489764 casein kinase II subunit alpha
7492485 O, P LOC7492485 protein GIGANTEA
7492759 O, N LOC7492759 protein SUPPRESSOR OF PHYA-105 1
7495156 O, C LOC7495156 cryptochrome-1


List of genes in mtr


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
11405950 C, N LOC11405950 phytochrome A
11406493 O, N LOC11406493 transcription factor PIF3
11407003 O, Y LOC11407003 chalcone synthase 4
11410562 O, P LOC11410562 protein GIGANTEA
11410839 O, N LOC11410839 casein kinase II subunit alpha-2
11411483 O, C LOC11411483 chalcone synthase 1A
11412120 O, N LOC11412120 two-component response regulator-like APRR3
11417024 O, Y LOC11417024 adagio protein 3
11418796 O, Y LOC11418796 chalcone synthase 2
11418875 M, Y LOC11418875 cryptochrome-1
11419346 O, Y LOC11419346 chalcone synthase 5
11420025 C, Y LOC11420025 phytochrome B
11420334 O, Y LOC11420334 chalcone synthase 8
11420561 C, N LOC11420561 transcription factor HY5-like
11420610 O, Y LOC11420610 chalcone synthase 2
11420611 O, Y LOC11420611 chalcone synthase 2
11420758 O, N LOC11420758 E3 ubiquitin-protein ligase COP1
11421144 O, Y LOC11421144 chalcone synthase 2
11423615 O, N LOC11423615 transcription factor TCP7
11423879 O, N LOC11423879 transcription factor TCP7
11424172 O, Y LOC11424172 chalcone synthase 2
11426713 O, N LOC11426713 two-component response regulator-like APRR9
11427085 O, Y LOC11427085 protein HEADING DATE 3A
11427226 O, N LOC11427226 transcription factor PIF3
11428875 O, C LOC11428875 cryptochrome-1
11428910 O, Y LOC11428910 chalcone synthase 5
11430037 O, N LOC11430037 transcription factor PIF3
11430161 O, N LOC11430161 casein kinase II subunit beta-1
11431402 O, N LOC11431402 protein EARLY FLOWERING 3
11432385 O, N LOC11432385 protein LHY
11434455 C, C LOC11434455 casein kinase II subunit alpha-2
11436702 O, Y LOC11436702 chalcone synthase 4
11437198 O, N LOC11437198 protein SPA1-RELATED 2
11437345 O, N LOC11437345 two-component response regulator-like APRR9
11438511 O, Y LOC11438511 chalcone synthase 1A
11438588 O, C LOC11438588 protein HEADING DATE 3A
11439469 O, Y LOC11439469 chalcone synthase 1B
11440049 O, Y LOC11440049 chalcone synthase
11442534 O, Y LOC11442534 chalcone synthase 4
11445386 O, N LOC11445386 adagio protein 1
25482012 O, N LOC25482012 ELF3-like protein 2
25484061 O, N LOC25484061 two-component response regulator-like APRR7
25484452 M, C LOC25484452 cryptochrome-1
25485043 O, Y LOC25485043 chalcone synthase 8
25488813 O, N LOC25488813 two-component response regulator-like APRR1
25489716 O, C LOC25489716 chalcone synthase
25489717 M, Y LOC25489717 stilbene synthase 4
25493524 M, C LOC25493524 casein kinase II subunit alpha
25493577 O, N LOC25493577 casein kinase II subunit beta-1
25493836 O, N LOC25493836 two-component response regulator-like APRR1
25494497 O, C LOC25494497 chalcone synthase 9
25494498 O, Y LOC25494498 chalcone synthase 9
25495876 O, Y LOC25495876 protein FLOWERING LOCUS T
25499670 O, Y LOC25499670 chalcone synthase 4
25500383 O, N LOC25500383 protein HEADING DATE 3B
25500611 O, N LOC25500611 two-component response regulator-like APRR5
25500742 O, N LOC25500742 protein SUPPRESSOR OF PHYA-105 1


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