KEGG 00130 Ubiquinone and other terpenoid-quinone biosynthesis
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar) mtr(Medicago)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 11
ath00940 Phenylpropanoid biosynthesis 11
ath00360 Phenylalanine metabolism 6
ath00999 Biosynthesis of secondary metabolites - unclassified 5
ath00941 Flavonoid biosynthesis 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 49
gma00940 Phenylpropanoid biosynthesis 17
gma00999 Biosynthesis of secondary metabolites - unclassified 11
gma00941 Flavonoid biosynthesis 7
gma00360 Phenylalanine metabolism 7
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 6
sly00940 Phenylpropanoid biosynthesis 5
sly00999 Biosynthesis of secondary metabolites - unclassified 4
sly00360 Phenylalanine metabolism 2
sly00941 Flavonoid biosynthesis 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 8
osa00940 Phenylpropanoid biosynthesis 8
osa00360 Phenylalanine metabolism 5
osa00999 Biosynthesis of secondary metabolites - unclassified 4
osa00270 Cysteine and methionine metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 10
zma00940 Phenylpropanoid biosynthesis 6
zma00999 Biosynthesis of secondary metabolites - unclassified 4
zma00360 Phenylalanine metabolism 3
zma00350 Tyrosine metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 8
bra00940 Phenylpropanoid biosynthesis 7
bra00999 Biosynthesis of secondary metabolites - unclassified 4
bra00941 Flavonoid biosynthesis 3
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 17
vvi00940 Phenylpropanoid biosynthesis 7
vvi00999 Biosynthesis of secondary metabolites - unclassified 7
vvi00941 Flavonoid biosynthesis 4
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 10
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo01200 Carbon metabolism 2
ppo00350 Tyrosine metabolism 2
ppo00360 Phenylalanine metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 8
mtr00940 Phenylpropanoid biosynthesis 5
mtr00941 Flavonoid biosynthesis 2
mtr00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Gene list in the network
Symbol Function*
C4H cinnamate-4-hydroxylase
PAL1 PHE ammonia lyase 1
CYP98A3 cytochrome P450, family 98, subfamily A, polypeptide 3
PAL4 phenylalanine ammonia-lyase 4
4CL5 4-coumarate:CoA ligase 5
4CL2 4-coumarate:CoA ligase 2
PAL2 phenylalanine ammonia-lyase 2
CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
CAD5 cinnamyl alcohol dehydrogenase 5
AT5G21222 protein kinase family protein
AT5G36160 Tyrosine transaminase family protein
TAT7 Tyrosine transaminase family protein
PDS1 4-hydroxyphenylpyruvate dioxygenase
AAE14 acyl-activating enzyme 14
4CL1 4-coumarate:CoA ligase 1
LysoPL2 lysophospholipase 2
GSTU16 glutathione S-transferase TAU 16
ECHID enoyl-CoA hydratase/isomerase D
ABC4 UbiA prenyltransferase family protein
PHYLLO 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein
AT1G78180 Mitochondrial substrate carrier family protein
MYB63 myb domain protein 63
Symbol Function*
4CL3 4-coumarate:CoA ligase isoenzyme 3
PR-10 stress-induced protein SAM22
4CL4 4-coumarate--CoA ligase 4
4CL2 4-coumarate--CoA ligase 2
4CL1 4-coumarate:coenzyme A ligase
LOC732543 gamma-tocopherol methyltransferase
CHI2-A chalcone--flavonone isomerase 2-A
CHI4A chalcone isomerase 4A
CHS1 chalcone synthase 1
VTE2-2 homogentisate phytyltransferase VTE2-2
HPT1 homogentisate phytylprenyltransferase
LOC732650 tyrosine aminotransferase
HPPD 4-hydroxyphenylpyruvate dioxygenase
G4DT Glycinol 4-dimethylallyltransferase
LOC100305601 putative flavodoxin-like quinone reductase
LOC100305649 uncharacterized LOC100305649
LOC100305786 putative photosystem I subunit G
C4H trans-cinnamate 4-monooxygenase
LOC100499662 uncharacterized LOC100499662
LOC100499870 NAD(P)H dehydrogenase (quinone) FQR1-like
LOC100500611 cytochrome b5
LOC100527631 uncharacterized LOC100527631
PT01 glycinol 2-dimethylallyl transferase
LOC100778056 cytochrome P450 82A4
LOC100778509 probable tocopherol O-methyltransferase, chloroplastic
LOC100779281 uncharacterized LOC100779281
LOC100782743 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal
LOC100783579 NAD(P)-binding Rossmann-fold superfamily protein
LOC100783986 37 kDa inner envelope membrane protein, chloroplastic-like
LOC100784392 probable aminotransferase TAT2
LOC100785132 probable aminotransferase TAT2
LOC100785661 caffeoylshikimate esterase
PT11A prenyltransferase family protein PT11a
LOC100787691 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal
PAL1.2 phenylalanine ammonia-lyase 1
LOC100789470 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic
LOC100789973 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic
LOC100790623 flagellar radial spoke protein 5
LOC100790629 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic
LOC100791902 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic
GAMMA-TMT gamma-tocopherol methyltransferase
LOC100793045 NAD(P)H dehydrogenase (quinone) FQR1
LOC100794692 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial-like
4CL 4-coumarate--CoA ligase-like 7-like
LOC100798407 pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
ICS1 isochorismate synthase, chloroplastic
LOC100800733 probable carboxylesterase 2
PAL2.4 phenylalanine ammonia-lyase 2.4
LOC100802763 polyphenol oxidase, chloroplastic
LOC100803804 probable NAD(P)H dehydrogenase (quinone) FQR1-like 2
LOC100804974 isochorismate synthase, chloroplastic
LOC100805113 flavoprotein wrbA-like
LOC100806561 shikimate O-hydroxycinnamoyltransferase
LOC100806615 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic
LOC100807101 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal-like
LOC100807532 probable NAD(P)H dehydrogenase (quinone) FQR1-like 2
LOC100809530 probable NAD(P)H dehydrogenase (quinone) FQR1-like 2
LOC100809925 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal
LOC100810418 4-coumarate--CoA ligase 1
LOC100811224 probable NAD(P)H dehydrogenase (quinone) FQR1-like 2
LOC100811418 4-coumarate--CoA ligase-like 1
G2DT glycinol 2-dimethylallyltransferase
LOC100814237 4-coumarate--CoA ligase-like 1
LOC100816719 probable WRKY transcription factor 47
PAL2.2 phenylalanine ammonia-lyase 2.2
LOC100818985 trans-cinnamate 4-monooxygenase
LOC100819192 4-coumarate--CoA ligase 1
VTE2-1 homogentisate phytyltransferase 1, chloroplastic-like
LOC100820075 shikimate O-hydroxycinnamoyltransferase
LOC106794098 homogentisate solanesyltransferase, chloroplastic
Symbol Function*
LOC101243656 phenylalanine ammonia-lyase 6
LOC101244196 trans-cinnamate 4-monooxygenase
LOC101244496 trans-cinnamate 4-monooxygenase
LOC101245475 4-hydroxyphenylpyruvate dioxygenase
LOC101248210 4-coumarate--CoA ligase
ABC1K3 ABC1-like kinase 3
4CL 4-coumarate--CoA ligase
LOC101263978 alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial
Symbol Function*
LOC4326996 S-adenosylmethionine synthase 2-like
LOC4327039 NAD(P)H dehydrogenase (quinone) FQR1
LOC4328425 4-hydroxyphenylpyruvate dioxygenase
LOC4328485 probable 4-coumarate--CoA ligase 3
LOC4328552 cinnamyl alcohol dehydrogenase 2-like
LOC4329329 cytochrome P450 CYP73A100
LOC4330037 phenylalanine ammonia-lyase
LOC4330040 phenylalanine ammonia-lyase-like
LOC4333780 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1
LOC4338409 trans-cinnamate 4-monooxygenase
LOC4338861 phenylalanine ammonia-lyase
LOC4345717 probable 4-coumarate--CoA ligase 5
LOC4345934 tricin synthase 1-like
LOC4351017 probable aminotransferase TAT2
Symbol Function*
LOC542166 4-coumarate--CoA ligase 1
LOC606444 4-hydroxyphenylpyruvate dioxygenase 1
LOC100191816 S-alkyl-thiohydroximate lyase SUR1
LOC100272756 putative cytochrome P450 superfamily protein
LOC100272801 putative cytochrome P450 superfamily protein
LOC100273579 phenylalanine ammonia lyase9
LOC100275708 Isochorismate synthase 2 chloroplastic
LOC100283201 uncharacterized LOC100283201
LOC100285365 uncharacterized LOC100285365
LOC100285808 uncharacterized LOC100285808
LOC103643375 cytochrome P450 84A1
LOC103653401 AMP-binding superfamily pseudogene
Symbol Function*
LOC103829920 phenylalanine ammonia-lyase 2-like
LOC103830688 isochorismate synthase 1, chloroplastic
LOC103844906 NAD(P)H dehydrogenase (quinone) FQR1-like
LOC103852920 isochorismate synthase 1, chloroplastic-like
LOC103857323 trans-cinnamate 4-monooxygenase-like
LOC103862330 cinnamyl alcohol dehydrogenase 5
LOC103865043 trans-cinnamate 4-monooxygenase-like
LOC103865574 phenylalanine ammonia-lyase 1
LOC103867954 trans-cinnamate 4-monooxygenase
LOC103868556 4-coumarate--CoA ligase 1
LOC103871476 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like
LOC103873813 E3 ubiquitin-protein ligase RGLG1
Symbol Function*
LOC100232919 NAD(P)H dehydrogenase (quinone) FQR1
LOC100241452 probable NAD(P)H dehydrogenase (quinone) FQR1-like 1
LOC100242641 probable tocopherol O-methyltransferase, chloroplastic
LOC100242903 stilbene synthase 4
4CL 4-coumarate:CoA ligase
LOC100246470 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal
LOC100247278 GTP-binding protein TypA/BipA homolog
LOC100248785 4-hydroxyphenylpyruvate dioxygenase
LOC100250731 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal
LOC100251539 cytochrome P450 CYP73A100
LOC100253493 trans-cinnamate 4-monooxygenase-like
LOC100254194 sodium/pyruvate cotransporter BASS2, chloroplastic
LOC100254698 4-coumarate--CoA ligase 2
LOC100256341 uncharacterized LOC100256341
LOC100256517 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic
LOC100256763 probable 2-carboxy-D-arabinitol-1-phosphatase
LOC100257915 RHOMBOID-like protein 1
LOC100261471 4-coumarate--CoA ligase-like 6
LOC100264108 homogentisate solanesyltransferase, chloroplastic
LOC100264240 probable carboxylesterase 2
LOC100264538 glucuronokinase 1
LOC100266547 4-coumarate--CoA ligase-like 9
LOC100267022 arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like
LOC100267198 4-coumarate--CoA ligase-like 7
LOC100267215 cytochrome P450 CYP73A100
LOC100853785 probable NAD(P)H dehydrogenase (quinone) FQR1-like 1
LOC109121384 ubiquinone biosynthesis O-methyltransferase, mitochondrial
Symbol Function*
LOC7455972 formate dehydrogenase, mitochondrial
LOC7459237 probable chalcone--flavonone isomerase 3
LOC7462312 probable aminotransferase TAT2
LOC7465624 probable tocopherol O-methyltransferase, chloroplastic
LOC7469843 4-coumarate--CoA ligase 2
LOC7470905 probable NAD(P)H dehydrogenase (quinone) FQR1-like 1
LOC7478016 probable NAD(P)H dehydrogenase (quinone) FQR1-like 2
LOC7480718 4-hydroxyphenylpyruvate dioxygenase
LOC7484749 isochorismate synthase, chloroplastic
LOC7496490 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1
LOC7496610 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic
LOC7496858 catalase isozyme 1
LOC7497031 probable NAD(P)H dehydrogenase (quinone) FQR1-like 1
Symbol Function*
LOC11408668 NAD(P)H dehydrogenase (quinone) FQR1
LOC11410615 probable NAD(P)H dehydrogenase (quinone) FQR1-like 3
LOC11414035 4-coumarate--CoA ligase-like 9
LOC11417841 UPF0301 protein BF2109
LOC11418773 arogenate dehydratase 3, chloroplastic
LOC11419136 4-coumarate--CoA ligase-like 9
LOC11429318 4-coumarate--CoA ligase 1
LOC11441252 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1
LOC11442075 trans-cinnamate 4-monooxygenase
LOC11446939 caffeoyl-CoA O-methyltransferase
LOC25493239 NAD(P)H dehydrogenase (quinone) FQR1


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