KEGG 00250 Alanine, aspartate and glutamate metabolism
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar) mtr(Medicago)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00250 Alanine, aspartate and glutamate metabolism 24
ath01230 Biosynthesis of amino acids 19
ath00220 Arginine biosynthesis 12
ath01200 Carbon metabolism 10
ath01210 2-Oxocarboxylic acid metabolism 9
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 59
gma01230 Biosynthesis of amino acids 28
gma00220 Arginine biosynthesis 22
gma00910 Nitrogen metabolism 16
gma00630 Glyoxylate and dicarboxylate metabolism 9
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00250 Alanine, aspartate and glutamate metabolism 16
sly01230 Biosynthesis of amino acids 11
sly00220 Arginine biosynthesis 10
sly01200 Carbon metabolism 7
sly00710 Carbon fixation in photosynthetic organisms 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00250 Alanine, aspartate and glutamate metabolism 20
osa01230 Biosynthesis of amino acids 10
osa00220 Arginine biosynthesis 8
osa01200 Carbon metabolism 7
osa01210 2-Oxocarboxylic acid metabolism 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00250 Alanine, aspartate and glutamate metabolism 42
zma01230 Biosynthesis of amino acids 23
zma00220 Arginine biosynthesis 14
zma01200 Carbon metabolism 11
zma00710 Carbon fixation in photosynthetic organisms 8
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00250 Alanine, aspartate and glutamate metabolism 35
bra00220 Arginine biosynthesis 18
bra01230 Biosynthesis of amino acids 14
bra00910 Nitrogen metabolism 10
bra00630 Glyoxylate and dicarboxylate metabolism 10
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00250 Alanine, aspartate and glutamate metabolism 11
vvi01200 Carbon metabolism 9
vvi00220 Arginine biosynthesis 7
vvi01230 Biosynthesis of amino acids 6
vvi00710 Carbon fixation in photosynthetic organisms 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00250 Alanine, aspartate and glutamate metabolism 21
ppo01200 Carbon metabolism 11
ppo00220 Arginine biosynthesis 10
ppo01230 Biosynthesis of amino acids 10
ppo00630 Glyoxylate and dicarboxylate metabolism 6
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 19
mtr01200 Carbon metabolism 9
mtr00220 Arginine biosynthesis 8
mtr01230 Biosynthesis of amino acids 7
mtr00910 Nitrogen metabolism 5
Gene list in the network
Symbol Function*
AGT alanine:glyoxylate aminotransferase
ALDH6B2 aldehyde dehydrogenase 6B2
ASP1 aspartate aminotransferase 1
AT2G31390 pfkB-like carbohydrate kinase family protein
AGT3 alanine:glyoxylate aminotransferase 3
AT3G14390 Pyridoxal-dependent decarboxylase family protein
GOX1 Aldolase-type TIM barrel family protein
ASPGB1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
GLN1.3 glutamine synthetase 1.3
PYRB PYRIMIDINE B
POP2 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
CARA carbamoyl phosphate synthetase A
ASN1 glutamine-dependent asparagine synthase 1
ADSS adenylosuccinate synthase
AT3G58610 ketol-acid reductoisomerase
AT4G24830 arginosuccinate synthase family
ASP5 aspartate aminotransferase 5
AGD2 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
AGT2 alanine:glyoxylate aminotransferase 2
GDH2 glutamate dehydrogenase 2
EMB1873 porphyromonas-type peptidyl-arginine deiminase family protein
AT5G09300 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
ASN3 asparagine synthetase 3
AT5G10920 L-Aspartase-like family protein
ASP3 aspartate aminotransferase 3
AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
VAT1 VALINE-TOLERANT 1
GLN1;4 glutamine synthetase 1;4
ASP2 aspartate aminotransferase 2
NIT4 nitrilase 4
GSR 1 hypothetical protein
ALDH12A1 aldehyde dehydrogenase 12A1
HDH histidinol dehydrogenase
AT1G14810 semialdehyde dehydrogenase family protein
AlaAT1 alanine aminotransferas
MCCA methylcrotonyl-CoA carboxylase alpha chain
GGT1 glutamate:glyoxylate aminotransferase
HPR hydroxypyruvate reductase
Symbol Function*
GS1alpha cytosolic glutamine synthetase alpha
GDH2 glutamate dehydrogenase 2
ASP1 L-asparaginase
GAD GAD protein
LOC547792 aspartate aminotransferase
LOC547877 asparagine synthetase
AS2 asparagine synthetase 2
AS1 asparagine synthetase 1
GS glutamine synthetase nodule isozyme
PURD phosphoribosylamine--glycine ligase
GS-2 glutamine synthetase precursor
GS glutamate--ammonia ligase
LOC732565 serine glyoxylate aminotransferase 3
LOC732660 asparagine synthetase [glutamine-hydrolyzing] 3
ALAAT1 alanine aminotransferase 1
LOC100499845 argininosuccinate synthase, chloroplastic
LOC100499878 elongation factor 1-delta 2-like
LOC100500067 Bowman-Birk type proteinase inhibitor
LOC100776235 alanine aminotransferase 2
LOC100776931 carbamoyl-phosphate synthase small chain, chloroplastic-like
LOC100777153 peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like
LOC100777869 glutamate dehydrogenase 1
LOC100779210 acetolactate synthase small subunit 2, chloroplastic-like
LOC100780483 argininosuccinate lyase, chloroplastic
LOC100780526 alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
LOC100780873 glutamine synthetase leaf isozyme, chloroplastic
LOC100782330 glutamate decarboxylase 1
LOC100784900 glutamate synthase [NADH], amyloplastic
LOC100786630 serine--glyoxylate aminotransferase-like
LOC100787097 aspartate carbamoyltransferase 1, chloroplastic
LOC100787167 glutamate decarboxylase 1
LOC100788009 NADP-specific glutamate dehydrogenase
LOC100788179 basic 7S globulin
LOC100788470 carbamoyl-phosphate synthase small chain-like
LOC100788806 asparagine synthetase [glutamine-hydrolyzing] 3
LOC100790263 phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial
LOC100791696 glutamate decarboxylase 1
LOC100791919 amidophosphoribosyltransferase, chloroplastic
LOC100792329 adenylosuccinate synthetase 2, chloroplastic
LOC100793231 glutamate dehydrogenase 2
ALDH5F1 putative succinate-semialdehyde dehydrogenase, mitochondrial
LOC100795886 argininosuccinate synthase, chloroplastic-like
LOC100796941 probable isoaspartyl peptidase/L-asparaginase 2
LOC100797022 asparagine synthetase-like
LOC100797501 acetylornithine aminotransferase, mitochondrial
LOC100797877 carbamoyl-phosphate synthase large chain, chloroplastic
LOC100798318 asparagine synthetase [glutamine-hydrolyzing] 2
LOC100801575 adenylosuccinate lyase
LOC100801720 amidophosphoribosyltransferase 1
LOC100801991 glutamate dehydrogenase 1
LOC100802354 aspartate carbamoyltransferase 1, chloroplastic
LOC100803038 probable isoaspartyl peptidase/L-asparaginase 2
LOC100804017 alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
LOC100805702 cysteine proteinase RD21A
LOC100806168 carbamoyl-phosphate synthase small chain, chloroplastic
LOC100808747 40S ribosomal protein S3a-like
LOC100809032 NADP-specific glutamate dehydrogenase
LOC100809547 arginine biosynthesis bifunctional protein ArgJ, chloroplastic
LOC100809905 glutamate synthase [NADH], amyloplastic
LOC100811514 aspartate aminotransferase P2, mitochondrial
LOC100811618 adenylosuccinate synthetase 2, chloroplastic
LOC100812187 probable isoaspartyl peptidase/L-asparaginase 2-like
LOC100812201 glutamate decarboxylase 1-like
ALDH12A2 aldehyde dehydrogenase 12A2
LOC100815181 gamma aminobutyrate transaminase 3, chloroplastic
LOC100815931 glutamate synthase [NADH], amyloplastic
LOC100816038 argininosuccinate synthase, chloroplastic
LOC100817922 glutamine synthetase PR-2
LOC100818533 adenylosuccinate lyase
LOC100819513 glutamate synthase [NADH], amyloplastic
Symbol Function*
gts1 glutamine synthetase cytosolic isozyme 1-1
gdh1 glutamate dehydrogenase
GS1 glutamine synthetase
GAD3 glutamate decarboxylase isoform3
LOC101244012 aspartate aminotransferase, cytoplasmic
LOC101244420 glutamate--tRNA ligase, cytoplasmic
LOC101245157 probable isoaspartyl peptidase/L-asparaginase 2
LOC101245455 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha
LOC101246035 alanine aminotransferase 2
LOC101246328 alanine aminotransferase 2-like
LOC101247011 alanine-glyoxylate transaminase
LOC101250934 amidophosphoribosyltransferase, chloroplastic
LOC101254281 glutamate synthase 1 [NADH], chloroplastic
AS argininosuccinate lyase
ACAT5 acetyl-CoA C-acetyltranferase 5
LOC101259343 carbamoyl-phosphate synthase large chain, chloroplastic
LOC101260072 aspartate aminotransferase, cytoplasmic
LOC101260239 alanine aminotransferase 2
LOC101263138 serine hydroxymethyltransferase 3, chloroplastic
ASS argininosuccinate synthase
Symbol Function*
LOC4325621 aspartate aminotransferase, cytoplasmic-like
LOC4326346 carbamoyl-phosphate synthase large chain, chloroplastic-like
LOC4330474 carbamoyl-phosphate synthase small chain, chloroplastic-like
LOC4331017 aspartate aminotransferase, chloroplastic
LOC4331779 alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
LOC4331792 adenylosuccinate synthetase 1, chloroplastic-like
LOC4332402 oxysterol-binding protein-related protein 3C
LOC4332563 probable LL-diaminopimelate aminotransferase, chloroplastic
LOC4332596 argininosuccinate lyase, chloroplastic
LOC4334349 peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like
LOC4337229 probable isoaspartyl peptidase/L-asparaginase 2
LOC4337272 glutamine synthetase, chloroplastic-like
LOC4337428 probable allantoinase
LOC4340706 asparagine synthetase [glutamine-hydrolyzing] 2-like
LOC4341252 aspartate aminotransferase, mitochondrial
LOC4342210 glutamate--glyoxylate aminotransferase 2
LOC4342420 peroxisomal (S)-2-hydroxy-acid oxidase GLO5-like
LOC4344928 probable gamma-aminobutyrate transaminase 3, mitochondrial
LOC4345338 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha
LOC4345962 serine--glyoxylate aminotransferase
LOC4348524 alanine aminotransferase 2
LOC4349694 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
LOC4349899 calcium-dependent protein kinase 24-like
LOC4351413 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
LOC4351847 argininosuccinate synthase, chloroplastic
LOC4352420 probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
LOC9267109 succinate-semialdehyde dehydrogenase, mitochondrial-like
LOC9269289 probable aldehyde dehydrogenase
LOC9270815 branched-chain-amino-acid aminotransferase-like protein 1
LOC9271427 ACT domain-containing protein DS12, chloroplastic
Symbol Function*
LOC541648 lysine-ketoglutarate reductase/saccharopine dehydrogenase 1
LOC542214 glutamine synthetase 4
LOC542215 glutamine synthetase 3
LOC542334 adenylosuccinate synthetase
LOC542401 glutamine synthetase 5
LOC542435 asparagine synthetase homolog 1
LOC542520 glutamine synthetase 6
LOC542746 glutamine synthetase 1
LOC100191977 argininosuccinate lyase
LOC100192349 asparagine synthetase 2
LOC100192350 asparagine synthetase 3
LOC100192351 asparagine synthetase 4
LOC100193253 ATP phosphoribosyltransferase 2 chloroplastic
LOC100193467 uncharacterized LOC100193467
LOC100193705 Alanine aminotransferase 2 mitochondrial
LOC100193777 uncharacterized LOC100193777
LOC100194039 4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic
LOC100194250 Protein SULFUR DEFICIENCY-INDUCED 1
LOC100217081 L-Aspartase-like family protein
LOC100272297 uncharacterized LOC100272297
LOC100272659 uncharacterized LOC100272659
LOC100272718 uncharacterized LOC100272718
LOC100273311 uncharacterized LOC100273311
LOC100273931 carbamoyl-phosphate synthase small chain
LOC100274106 argininosuccinate synthase
LOC100274119 aspartate aminotransferase
LOC100274212 Allantoinase
LOC100274407 uncharacterized LOC100274407
LOC100274974 uncharacterized LOC100274974
LOC100279249 uncharacterized LOC100279249
LOC100280624 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
LOC100280779 succinate semialdehyde dehydrogenase
LOC100280822 alanine aminotransferase 2
LOC100281060 amidophosphoribosyltransferase
LOC100281211 DNA-binding protein
LOC100282373 uncharacterized LOC100282373
LOC100282482 aspartate carbamoyltransferase 1
LOC100282625 aspartate aminotransferase
LOC100282849 uncharacterized LOC100282849
LOC100284047 succinate semialdehyde dehydrogenase
LOC100286291 uncharacterized LOC100286291
LOC100384163 DUF506 family protein
LOC100384690 uncharacterized LOC100384690
LOC100384793 alanine aminotransferase 2
LOC103627237 poly [ADP-ribose] polymerase 3
LOC103630426 amidophosphoribosyltransferase, chloroplastic-like
LOC103631778 alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
LOC103635621 amidophosphoribosyltransferase, chloroplastic-like
LOC103635817 phosphoglycerate kinase, chloroplastic
LOC103636016 carbamoyl-phosphate synthase large chain, chloroplastic
LOC103636185 glutamate synthase 1 [NADH], chloroplastic
LOC103642664 phosphoenolpyruvate carboxylase 1-like
LOC103645124 serine--glyoxylate aminotransferase
LOC103645133 serine--glyoxylate aminotransferase
LOC103645841 probable isoaspartyl peptidase/L-asparaginase 2
LOC103645885 receptor-like serine/threonine-protein kinase SD1-8
LOC103645944 gamma-aminobutyrate transaminase 1, mitochondrial
LOC103651348 glutamate synthase 1 [NADH], chloroplastic
LOC103651512 carbamoyl-phosphate synthase large chain, chloroplastic
Symbol Function*
LOC103831356 carbamoyl-phosphate synthase small chain, chloroplastic-like
LOC103832421 succinate-semialdehyde dehydrogenase, mitochondrial
LOC103832634 aldehyde dehydrogenase family 7 member A1
LOC103832828 NADP-specific glutamate dehydrogenase-like
LOC103834062 adenylosuccinate lyase-like
LOC103834779 gamma-aminobutyrate transaminase POP2, mitochondrial-like
LOC103835108 alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
LOC103835672 glutamate--glyoxylate aminotransferase 1
LOC103835961 alanine aminotransferase 1, mitochondrial-like
LOC103837641 serine--glyoxylate aminotransferase
LOC103839002 glutamine synthetase cytosolic isozyme 1-3-like
LOC103840193 probable isoaspartyl peptidase/L-asparaginase 2
LOC103840449 carbamoyl-phosphate synthase large chain, chloroplastic
LOC103840779 glutamate--glyoxylate aminotransferase 1-like
LOC103841414 phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic
LOC103841669 adenylosuccinate synthetase, chloroplastic
LOC103846320 glutamine synthetase cytosolic isozyme 1-4
LOC103846769 argininosuccinate lyase, chloroplastic
LOC103847058 glutamate dehydrogenase 2
LOC103850656 glutamate dehydrogenase 2-like
LOC103851053 glutamine synthetase cytosolic isozyme 1-4-like
LOC103852593 carbamoyl-phosphate synthase small chain, chloroplastic
LOC103853233 acetylornithine aminotransferase, chloroplastic/mitochondrial-like
LOC103855068 ultraviolet-B receptor UVR8
LOC103856372 adenylosuccinate lyase
LOC103857728 phosphoribosylaminoimidazole carboxylase, chloroplastic-like
LOC103857781 alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial
LOC103859729 glutamine synthetase cytosolic isozyme 1-3-like
LOC103860370 serine--glyoxylate aminotransferase-like
LOC103860993 adenylosuccinate lyase-like
LOC103862653 argininosuccinate synthase, chloroplastic-like
LOC103863037 adenylosuccinate synthetase, chloroplastic-like
LOC103863698 protease Do-like 10, mitochondrial
LOC103864545 myb family transcription factor EFM
LOC103865090 aspartate aminotransferase, mitochondrial
LOC103865624 phosphoribosylaminoimidazole carboxylase, chloroplastic
LOC103869111 gamma-aminobutyrate transaminase POP2, mitochondrial
LOC103869333 aspartate carbamoyltransferase, chloroplastic
LOC103869647 glutamine synthetase cytosolic isozyme 1-3-like
LOC103869648 glutamine synthetase cytosolic isozyme 1-3-like
LOC103869850 probable isoaspartyl peptidase/L-asparaginase 2
LOC103870742 alkaline/neutral invertase C, mitochondrial
LOC103871264 NADP-specific glutamate dehydrogenase
LOC103871761 phosphoribosylamine--glycine ligase, chloroplastic
LOC103872517 alanine aminotransferase 1, mitochondrial-like
Symbol Function*
LOC100241156 alanine aminotransferase 2
LOC100244701 peroxisomal (S)-2-hydroxy-acid oxidase GLO1
LOC100245998 fructose-bisphosphate aldolase cytoplasmic isozyme-like
LOC100246842 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10
LOC100249999 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
LOC100251398 calcium uniporter protein 2, mitochondrial
LOC100251671 alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial
LOC100255702 anthranilate synthase 02
LOC100256163 aspartate aminotransferase, cytoplasmic
GDH glutamate dehydrogenase
LOC100261274 AlaT1
LOC100261927 serine--glyoxylate aminotransferase
LOC100262660 argininosuccinate lyase, chloroplastic
LOC100263048 glutamate dehydrogenase
LOC100267386 aldehyde dehydrogenase family 2 member B4, mitochondrial
LOC100268005 aspartate aminotransferase, cytoplasmic
Symbol Function*
LOC7453808 quinolinate synthase, chloroplastic
LOC7458090 adenylosuccinate lyase
LOC7458772 aspartate aminotransferase, cytoplasmic
LOC7459227 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
LOC7459544 putative G3BP-like protein
LOC7459928 2-alkenal reductase (NADP(+)-dependent)
LOC7460426 alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial
LOC7460760 glutamate--glyoxylate aminotransferase 2
LOC7461955 alanine aminotransferase 2
LOC7461992 carbamoyl-phosphate synthase small chain, chloroplastic
LOC7467203 argininosuccinate lyase, chloroplastic
LOC7467398 serine--glyoxylate aminotransferase
LOC7467988 serine--glyoxylate aminotransferase
LOC7468079 aspartate aminotransferase, mitochondrial
LOC7468631 DEAD-box ATP-dependent RNA helicase 56
LOC7469050 glutamate--glyoxylate aminotransferase 2
LOC7469108 glutamine synthetase leaf isozyme, chloroplastic
LOC7469881 glutamate dehydrogenase 1
LOC7471507 asparagine synthetase [glutamine-hydrolyzing] 2
LOC7472319 pyruvate decarboxylase 1
LOC7472359 peroxisomal (S)-2-hydroxy-acid oxidase
LOC7474918 outer envelope protein 61
LOC7479645 WAT1-related protein At5g07050
LOC7481606 succinate-semialdehyde dehydrogenase, mitochondrial
LOC7481831 enolase
LOC7482352 glutamate dehydrogenase 1
LOC7485189 glutamate decarboxylase
LOC7487858 L-aspartate oxidase, chloroplastic
LOC7489375 protein CHUP1, chloroplastic
LOC7491622 argininosuccinate synthase, chloroplastic
LOC7494291 amidophosphoribosyltransferase, chloroplastic
Symbol Function*
LOC11406332 calcium uniporter protein 2, mitochondrial
LOC11407155 carbamoyl-phosphate synthase small chain, chloroplastic
LOC11408458 aspartate aminotransferase, mitochondrial
LOC11412276 transmembrane protein 205
LOC11414418 ferredoxin--NADP reductase, root isozyme, chloroplastic
LOC11414500 probable glutamate dehydrogenase 3
LOC11417955 calcium uniporter protein 2, mitochondrial
LOC11418051 carbamoyl-phosphate synthase large chain, chloroplastic
LOC11423209 argininosuccinate lyase, chloroplastic
LOC11423326 serine--glyoxylate aminotransferase
LOC11424976 carbamoyl-phosphate synthase small chain, chloroplastic
LOC11426313 asparagine synthetase, root [glutamine-hydrolyzing]
LOC11432324 probable isoaspartyl peptidase/L-asparaginase 2
LOC11433125 alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial
LOC11434432 glucose-6-phosphate isomerase, cytosolic 1
LOC11438087 amidophosphoribosyltransferase, chloroplastic
LOC11440429 adenylosuccinate synthetase 2, chloroplastic
LOC11442772 delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial
LOC11443375 TBC1 domain family member 17
LOC11444017 alanine aminotransferase 2
LOC11444747 adenylosuccinate lyase
LOC11445727 ferredoxin--nitrite reductase, chloroplastic
LOC11445860 serine hydroxymethyltransferase 3, chloroplastic
LOC25485126 stem-specific protein TSJT1
LOC25486062 glutamine synthetase leaf isozyme, chloroplastic
LOC25490097 aspartate aminotransferase 1
LOC25493591 glutamate dehydrogenase 2
LOC25498702 mitochondrial uncoupling protein 1
LOC25498983 glutamate dehydrogenase 1


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