KEGG 00290 Valine, leucine and isoleucine biosynthesis
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar) mtr(Medicago)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 20
ath01210 2-Oxocarboxylic acid metabolism 19
ath00290 Valine, leucine and isoleucine biosynthesis 14
ath00966 Glucosinolate biosynthesis 9
ath00270 Cysteine and methionine metabolism 6
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00290 Valine, leucine and isoleucine biosynthesis 18
gma01230 Biosynthesis of amino acids 18
gma01210 2-Oxocarboxylic acid metabolism 17
gma00770 Pantothenate and CoA biosynthesis 10
gma00660 C5-Branched dibasic acid metabolism 9
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 11
sly00290 Valine, leucine and isoleucine biosynthesis 8
sly01210 2-Oxocarboxylic acid metabolism 7
sly00770 Pantothenate and CoA biosynthesis 6
sly00660 C5-Branched dibasic acid metabolism 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 10
osa00290 Valine, leucine and isoleucine biosynthesis 9
osa01210 2-Oxocarboxylic acid metabolism 9
osa00770 Pantothenate and CoA biosynthesis 5
osa00660 C5-Branched dibasic acid metabolism 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 15
zma00290 Valine, leucine and isoleucine biosynthesis 14
zma01210 2-Oxocarboxylic acid metabolism 13
zma00660 C5-Branched dibasic acid metabolism 9
zma00770 Pantothenate and CoA biosynthesis 7
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 16
bra01210 2-Oxocarboxylic acid metabolism 14
bra00290 Valine, leucine and isoleucine biosynthesis 13
bra00770 Pantothenate and CoA biosynthesis 7
bra00966 Glucosinolate biosynthesis 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00290 Valine, leucine and isoleucine biosynthesis 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi01230 Biosynthesis of amino acids 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00290 Valine, leucine and isoleucine biosynthesis 4
ppo01210 2-Oxocarboxylic acid metabolism 4
ppo01230 Biosynthesis of amino acids 4
ppo00660 C5-Branched dibasic acid metabolism 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00290 Valine, leucine and isoleucine biosynthesis 3
mtr00660 C5-Branched dibasic acid metabolism 3
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr01230 Biosynthesis of amino acids 3
Gene list in the network
Symbol Function*
HSK homoserine kinase
AT2G35040 AICARFT/IMPCHase bienzyme family protein
IPMI2 isopropylmalate isomerase 2
OMR1 L-O-methylthreonine resistant 1
AT3G14390 Pyridoxal-dependent decarboxylase family protein
MTO1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
BCAT4 branched-chain aminotransferase4
AT3G23940 dehydratase family
CARA carbamoyl phosphate synthetase A
BCAT3 branched-chain aminotransferase 3
ADSS adenylosuccinate synthase
AT3G58610 ketol-acid reductoisomerase
IPMI1 isopropylmalate isomerase 1
IIL1 isopropyl malate isomerase large subunit 1
CYP83A1 cytochrome P450, family 83, subfamily A, polypeptide 1
AT-HF HIS HF
NAGS2 N-acetyl-l-glutamate synthase 2
AK-LYS1 aspartate kinase 1
IMD1 isopropylmalate dehydrogenase 1
VAT1 VALINE-TOLERANT 1
ATBCAT-5 branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5)
AT1G14810 semialdehyde dehydrogenase family protein
CYP79F2 cytochrome P450, family 79, subfamily F, polypeptide 2
MAML-4 methylthioalkylmalate synthase-like 4
AT1G21440 Phosphoenolpyruvate carboxylase family protein
IMD3 isopropylmalate dehydrogenase 3
AK-HSDH I aspartate kinase-homoserine dehydrogenase i
IMS1 2-isopropylmalate synthase 1
OTC ornithine carbamoyltransferase
GSTU20 glutathione S-transferase TAU 20
IMD2 isopropylmalate dehydrogenase 2
Symbol Function*
LOC100777200 threonine dehydratase biosynthetic, chloroplastic
LOC100779210 acetolactate synthase small subunit 2, chloroplastic-like
LOC100780547 3-isopropylmalate dehydratase large subunit, chloroplastic
LOC100782644 branched-chain-amino-acid aminotransferase 2, chloroplastic-like
LOC100782688 3-isopropylmalate dehydratase small subunit 3
LOC100783934 acetolactate synthase 2, chloroplastic
LOC100787098 3-isopropylmalate dehydratase large subunit, chloroplastic
EF1BGAMMA3 EF1Bgamma class glutathione S-transferase
LOC100788955 2-isopropylmalate synthase 2, chloroplastic
LOC100793433 3-isopropylmalate dehydrogenase, chloroplastic-like
LOC100796766 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial
LOC100798328 branched-chain-amino-acid aminotransferase 5, chloroplastic-like
LOC100799921 ketol-acid reductoisomerase, chloroplastic
LOC100806689 putative dihydroxy-acid dehydratase, mitochondrial-like
LOC100808747 40S ribosomal protein S3a-like
LOC100809737 3-isopropylmalate dehydratase small subunit 3
LOC100810297 acetolactate synthase small subunit 2, chloroplastic
LOC100812124 carbonic anhydrase, chloroplastic-like
AHAS3 acetohydroxy acid synthetase
LOC100812763 ketol-acid reductoisomerase, chloroplastic-like
LOC100812918 2-isopropylmalate synthase 2, chloroplastic
LOC100818776 branched-chain-amino-acid aminotransferase 2, chloroplastic
Symbol Function*
HSC80 heat shock cognate protein 80
LOC544152 phospho-2-dehydro-3-deoxyheptonate aldolase
LOC100037737 chloroplast threonine deaminase 1 precursor
LOC101245812 branched-chain amino acid aminotransferase 2, chloroplastic-like
LOC101247891 acetolactate synthase 2, chloroplastic
LOC101247914 3-isopropylmalate dehydrogenase, chloroplastic
LOC101250390 indole-3-glycerol phosphate synthase, chloroplastic
LOC101252192 LL-diaminopimelate aminotransferase, chloroplastic
LOC101254112 acetolactate synthase 2, chloroplastic-like
LOC101257242 ketol-acid reductoisomerase, chloroplastic-like
LOC101261134 ketol-acid reductoisomerase, chloroplastic
LOC101264707 dihydroxy-acid dehydratase-like
Symbol Function*
LOC4325375 ketol-acid reductoisomerase, chloroplastic-like
LOC4327862 pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial
LOC4328147 3-isopropylmalate dehydratase large subunit, chloroplastic
LOC4329450 acetolactate synthase 1, chloroplastic-like
LOC4329938 acetolactate synthase small subunit 2, chloroplastic
LOC4333613 3-isopropylmalate dehydrogenase 2, chloroplastic
LOC4339677 ketol-acid reductoisomerase, chloroplastic-like
LOC4340389 nucleolar GTP-binding protein 1
LOC4345200 threonine--tRNA ligase, mitochondrial 1
LOC4345328 bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic
LOC4346318 dihydroxy-acid dehydratase, chloroplastic
LOC4349745 2-isopropylmalate synthase A
LOC4351460 2-isopropylmalate synthase A
LOC4352148 proline--tRNA ligase, cytoplasmic
Symbol Function*
LOC100191754 uncharacterized LOC100191754
LOC100193253 ATP phosphoribosyltransferase 2 chloroplastic
LOC100193695 ketol-acid reductoisomerase
LOC100193712 uncharacterized LOC100193712
LOC100274341 Acetolactate synthase 2, chloroplastic
LOC100280499 2-isopropylmalate synthase B
LOC100281617 uncharacterized LOC100281617
LOC100283376 3-isopropylmalate dehydrogenase 2
LOC100284589 uncharacterized LOC100284589
LOC100284799 acetolactate synthase/ amino acid binding protein
LOC100284902 3-isopropylmalate dehydratase large subunit 2
LOC100285396 acetolactate synthase 1
LOC100286245 3-isopropylmalate dehydratase small subunit 2
LOC100381801 Acetolactate synthase small subunit 1 chloroplastic
LOC103625947 threonine dehydratase biosynthetic, chloroplastic
LOC103650436 stromal 70 kDa heat shock-related protein, chloroplastic-like
LOC103652503 ketol-acid reductoisomerase, chloroplastic-like
Symbol Function*
LOC103828655 dihydroxy-acid dehydratase, chloroplastic
LOC103830170 ketol-acid reductoisomerase, chloroplastic
LOC103831845 dihydroxy-acid dehydratase, chloroplastic
LOC103833397 3-isopropylmalate dehydratase large subunit
OASA4 cysteine synthase
LOC103836051 aspartate-semialdehyde dehydrogenase-like
LOC103840454 glycine--tRNA ligase, mitochondrial 1
LOC103841734 ketol-acid reductoisomerase, chloroplastic-like
LOC103842888 arogenate dehydrogenase 2, chloroplastic
LOC103847839 threonine dehydratase biosynthetic, chloroplastic-like
LOC103850918 3-isopropylmalate dehydrogenase 3, chloroplastic
LOC103854915 methylthioalkylmalate synthase 1, chloroplastic
LOC103855828 soluble inorganic pyrophosphatase 6, chloroplastic
LOC103858112 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic
LOC103861619 arginine--tRNA ligase, chloroplastic/mitochondrial-like
LOC103862970 ketol-acid reductoisomerase, chloroplastic-like
LOC103863064 cystathionine beta-lyase, chloroplastic-like
LOC103863631 3-isopropylmalate dehydratase large subunit-like
LOC103866695 3-isopropylmalate dehydratase small subunit 1
LOC103872613 2-isopropylmalate synthase 1, chloroplastic
BCAT3-1 branched-chain-amino-acid aminotransferase 3, chloroplastic
LOC103874743 acetolactate synthase 3, chloroplastic
Symbol Function*
LOC100249820 2-isopropylmalate synthase A
LOC100262542 ketol-acid reductoisomerase, chloroplastic-like
Symbol Function*
LOC7454722 acetolactate synthase 2, chloroplastic
LOC7465501 3-isopropylmalate dehydratase small subunit 3
LOC7470567 3-isopropylmalate dehydrogenase, chloroplastic
LOC7478768 soluble inorganic pyrophosphatase 6, chloroplastic
LOC7486329 2-isopropylmalate synthase 2, chloroplastic
Symbol Function*
LOC11426593 acetolactate synthase small subunit 2, chloroplastic
LOC11434985 3-isopropylmalate dehydratase large subunit, chloroplastic
LOC11437125 bifunctional purine biosynthesis protein PurH
LOC25491331 3-isopropylmalate dehydratase small subunit 3


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