KEGG 00380 Tryptophan metabolism
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar) mtr(Medicago)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 24
ath01200 Carbon metabolism 9
ath01210 2-Oxocarboxylic acid metabolism 8
ath00966 Glucosinolate biosynthesis 7
ath00020 Citrate cycle (TCA cycle) 7
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00380 Tryptophan metabolism 39
gma00280 Valine, leucine and isoleucine degradation 20
gma00310 Lysine degradation 20
gma00620 Pyruvate metabolism 16
gma00010 Glycolysis / Gluconeogenesis 14
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 9
sly00380 Tryptophan metabolism 9
sly00640 Propanoate metabolism 6
sly00310 Lysine degradation 6
sly00020 Citrate cycle (TCA cycle) 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00380 Tryptophan metabolism 17
osa00280 Valine, leucine and isoleucine degradation 11
osa00310 Lysine degradation 11
osa00620 Pyruvate metabolism 11
osa01200 Carbon metabolism 8
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 23
zma01200 Carbon metabolism 14
zma00310 Lysine degradation 10
zma00630 Glyoxylate and dicarboxylate metabolism 9
zma00020 Citrate cycle (TCA cycle) 9
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 37
bra01200 Carbon metabolism 15
bra00310 Lysine degradation 13
bra00620 Pyruvate metabolism 11
bra00966 Glucosinolate biosynthesis 10
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00310 Lysine degradation 7
vvi00380 Tryptophan metabolism 6
vvi00280 Valine, leucine and isoleucine degradation 5
vvi00620 Pyruvate metabolism 5
vvi00071 Fatty acid degradation 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00330 Arginine and proline metabolism 2
ppo00360 Phenylalanine metabolism 2
ppo00380 Tryptophan metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00380 Tryptophan metabolism 8
mtr00310 Lysine degradation 7
mtr01200 Carbon metabolism 7
mtr00620 Pyruvate metabolism 6
mtr00280 Valine, leucine and isoleucine degradation 6
Gene list in the network
Symbol Function*
MOD1 NAD(P)-binding Rossmann-fold superfamily protein
SUR1 Tyrosine transaminase family protein
CYP79B3 cytochrome P450, family 79, subfamily B, polypeptide 3
PKT3 peroxisomal 3-ketoacyl-CoA thiolase 3
ATCS Citrate synthase family protein
MFP2 multifunctional protein 2
MLP-300B myrosinase-binding protein-like protein-300B
LPD1 lipoamide dehydrogenase 1
mtLPD2 lipoamide dehydrogenase 2
AT3G03500 TatD related DNase
AT3G21330 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
LTA2 2-oxoacid dehydrogenases acyltransferase family protein
AAO2 aldehyde oxidase 2
AT3G57600 Integrase-type DNA-binding superfamily protein
AT3G59750 Concanavalin A-like lectin protein kinase family protein
YUC2 Flavin-binding monooxygenase family protein
ECHIA enoyl-CoA hydratase/isomerase A
AT4G26910 Dihydrolipoamide succinyltransferase
YUC8 Flavin-binding monooxygenase family protein
CYP83B1 cytochrome P450, family 83, subfamily B, polypeptide 1
IDH1 isocitrate dehydrogenase 1
EDS5 MATE efflux family protein
AKN2 APS-kinase 2
CYP79B2 cytochrome P450, family 79, subfamily B, polypeptide 2
AT5G12050 rho GTPase-activating protein
AO1 aldehyde oxidase 1
TGG2 glucoside glucohydrolase 2
TGG1 thioglucoside glucohydrolase 1
AT5G26600 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
YUC5 Flavin-binding monooxygenase family protein
ACAT2 acetoacetyl-CoA thiolase 2
AT5G55070 Dihydrolipoamide succinyltransferase
VTC5 GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5)
MYB34 myb domain protein 34
ABCA10 ABC2 homolog 14
YUC9 YUCCA 9
SOT17 sulfotransferase 17
CAT1 catalase 1
UGT74B1 UDP-glucosyl transferase 74B1
ALDH3H1 aldehyde dehydrogenase 3H1
BGLU34 beta glucosidase 34
BGLU35 beta glucosidase 35
SOT16 sulfotransferase 16
Symbol Function*
CAT4 catalase
LOC547523 ferric leghemoglobin reductase-2 precursor
ALDH7B1 aldehyde dehydrogenase family 7 member B1
MCCA 3-methylcrotonyl-CoA carboxylase 1
CAT3 catalase
CAT5 catalase
LOC100170725 peroxisomal enoyl-CoA hydratase/isomerase family protein
LOC100306414 putative NIM1-interacting family protein
LOC100500277 dynein light chain 1-like
LOC100500596 probable acetyl-CoA acetyltransferase, cytosolic 2
LOC100776219 aromatic aminotransferase ISS1
LOC100777098 tryptophan aminotransferase-related protein 2
ALDH2B8 aldehyde dehydrogenase family 2 member B8
LOC100777958 flavin-containing monooxygenase YUCCA10-like
LOC100778785 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial
LOC100780213 probable acetyl-CoA acetyltransferase, cytosolic 2
LOC100780821 amidase 1
LOC100782004 dihydrolipoyl dehydrogenase 2, chloroplastic
ALDH2B2 aldehyde dehydrogenase family 2 member B2
ALDH3J1 aldehyde dehydrogenase family 3 member J1
LOC100785327 UDP-glycosyltransferase 87A1
ALDH2B1 aldehyde dehydrogenase family 2 member B1
LOC100787822 tyrosine/DOPA decarboxylase 2
LOC100787855 UDP-glycosyltransferase 74B1
LOC100788043 leghemoglobin reductase-like
LOC100788826 cytochrome P450 89A2
LOC100789395 transmembrane protein 136
LOC100794606 pentatricopeptide repeat-containing protein At5g02830, chloroplastic
LOC100795274 tyrosine/DOPA decarboxylase 2
LOC100795683 cytochrome P450 89A2
LOC100798834 bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT
LOC100799149 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial
TAP1 acetyltransferase TAP1
LOC100799546 indole-3-pyruvate monooxygenase YUCCA6
HGO1 homogentisate 1,2-dioxygenase
LOC100803319 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic
LOC100803887 aromatic aminotransferase ISS1-like
LOC100806069 UDP-glycosyltransferase 74B1
LOC100807674 amidase 1
ALDH3F2 aldehyde dehydrogenase family 3 member F2
LOC100808651 indole-3-pyruvate monooxygenase YUCCA6
LOC100809578 dihydrolipoyl dehydrogenase 2, chloroplastic
LOC100809788 probable enoyl-CoA hydratase 1, peroxisomal
ALDH3F1 aldehyde dehydrogenase family 3 member F1
ALDH7B2 aldehyde dehydrogenase family 7 member B2
ALDH2B5 aldehyde dehydrogenase family 2 member B5, mitochondrial
LOC100813488 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial
LOC100814459 spermidine hydroxycinnamoyl transferase
LOC100815454 ankyrin repeat-containing protein At2g01680
ALDH3J2 aldehyde dehydrogenase family 3 member J2
LOC100818522 tryptophan aminotransferase-related protein 2
Symbol Function*
SCOA succinyl-CoA ligase alpha 1 subunit
LOC544237 dihydrolipoamide dehydrogenase precursor
LOC101245444 dihydrolipoyl dehydrogenase, mitochondrial
LOC101248057 acyl-coenzyme A oxidase 4, peroxisomal
LOC101252968 aldehyde dehydrogenase family 7 member B4
ACAT2 acetyl-CoA C-acetyltranferase 2
FZY2 flavin monooxygenase-like protein
alpha-kGDH alpha - ketoglutarate dehydrogenase subunit E2
LOC101259333 catalase isozyme 3
LOC101262607 L-tryptophan--pyruvate aminotransferase 1-like
LOC101263657 probable mitochondrial-processing peptidase subunit beta, mitochondrial
LOC101268590 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial
ALDH6B2 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial
Symbol Function*
LOC4326136 acetyl-CoA acetyltransferase, cytosolic 1
LOC4326849 dihydrolipoyl dehydrogenase 1, chloroplastic
LOC4327300 mitochondrial-processing peptidase subunit alpha
LOC4328073 catalase isozyme A-like
LOC4330016 succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like
LOC4330146 aldehyde dehydrogenase family 3 member F1
LOC4330149 aldehyde dehydrogenase family 3 member F1
LOC4335689 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial
LOC4336982 probable gamma-aminobutyrate transaminase 2, mitochondrial
LOC4337676 isovaleryl-CoA dehydrogenase, mitochondrial-like
LOC4337862 dihydrolipoyl dehydrogenase 1, chloroplastic
LOC4337881 dihydrolipoyl dehydrogenase, mitochondrial
LOC4338322 acetyl-CoA carboxylase 2-like
LOC4340725 aldehyde dehydrogenase family 2 member B7, mitochondrial
LOC4344636 tryptophan decarboxylase 1-like
LOC4344637 tryptophan decarboxylase 1-like
LOC4345286 enoyl-[acyl-carrier-protein] reductase [NADH] 1, chloroplastic-like
LOC4346520 acetyl-CoA acetyltransferase, cytosolic 1
LOC4346795 acetylserotonin O-methyltransferase 1-like
LOC4347172 aldehyde dehydrogenase family 7 member A1
LOC4347993 acetylserotonin O-methyltransferase 3-like
LOC4347994 acetylserotonin O-methyltransferase 2-like
LOC4349966 aldehyde dehydrogenase family 3 member H1
LOC9267789 cathepsin B-like protease 3
LOC9269252 CASP-like protein 2D1
LOC9272625 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like
Symbol Function*
LOC541836 glutathione S-transferase GST 21
LOC542072 ADP-glucose pyrophosphorylase small subunit
LOC542229 uncharacterized LOC542229
LOC542362 endosperm specific protein 1
LOC542369 catalase 1
LOC100037821 flavin monooxygenase
LOC100193293 transaminase/ transferase
LOC100193491 uncharacterized LOC100193491
LOC100193519 Enoyl-[acyl-carrier-protein] reductase [NADH] chloroplastic
LOC100194114 uncharacterized LOC100194114
LOC100194338 uncharacterized LOC100194338
LOC100272716 uncharacterized LOC100272716
LOC100279056 uncharacterized LOC100279056
LOC100279306 putative regulator of chromosome condensation (RCC1) family protein
LOC100279950 Tyrosine decarboxylase 1
LOC100280624 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
LOC100282283 acetyl-CoA acetyltransferase, cytosolic 1
LOC100282748 aldehyde dehydrogenase family 7 member A1
LOC100283153 3-hydroxybutyryl-CoA dehydratase
LOC100283329 succinyl-CoA ligase alpha-chain 2
LOC100283420 uncharacterized LOC100283420
LOC100283964 uncharacterized LOC100283964
LOC100284269 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
LOC100285201 transaminase/ transferase, transferring nitrogenous groups
LOC100285505 alliin lyase 2
LOC100381818 dihydrolipoyl dehydrogenase
LOC100383025 Tyrosine decarboxylase 1
LOC100383097 hydroxycinnamoyltransferase2
LOC100383599 uncharacterized LOC100383599
LOC100384793 alanine aminotransferase 2
LOC100501719 Dihydrolipoyl dehydrogenase
LOC101202696 acetyl-CoA acetyltransferase, cytosolic 1
LOC103627746 putative laccase-9
LOC103631384 early nodulin-like protein 1
LOC103634861 L-tryptophan--pyruvate aminotransferase 1
LOC103644157 indole-3-acetaldehyde oxidase-like
LOC103646821 uncharacterized LOC103646821
LOC103649700 tryptophan aminotransferase-related protein 2-like
LOC103650140 dihydrolipoyl dehydrogenase 1, mitochondrial
LOC109942752 villin-4
Symbol Function*
LOC103827899 epithiospecifier protein-like
SUR1 S-alkyl-thiohydroximate lyase SUR1
LOC103829420 catalase-3-like
LOC103830942 myrosinase-like
LOC103831884 cytosolic sulfotransferase 16
LOC103832634 aldehyde dehydrogenase family 7 member A1
LOC103833295 cytochrome P450 83B1
LOC103834655 myrosinase MA1-like
LOC103834979 aldehyde dehydrogenase family 3 member F1-like
LOC103835788 catalase-3
LOC103836047 myrosinase-like
LOC103836205 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like
LOC103837118 probable inactive serine/threonine-protein kinase fnkC
LOC103837242 acetyl-CoA acetyltransferase, cytosolic 1-like
LOC103837684 polyol transporter 5
LOC103837982 S-alkyl-thiohydroximate lyase SUR1
LOC103838252 succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
LOC103839509 probable acetyl-CoA acetyltransferase, cytosolic 2
LOC103840452 myrosinase-like
LOC103840573 3-ketoacyl-CoA synthase 5
LOC103840711 UDP-glycosyltransferase 74B1
LOC103841125 acyl-coenzyme A oxidase 4, peroxisomal
LOC103844953 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial
LOC103848036 indole-3-acetaldehyde oxidase
LOC103848073 nitrilase 2
LOC103849284 L-ascorbate oxidase-like
LOC103850337 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
NIT-T1 nitrilase 2-like
LOC103851907 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial-like
LOC103852881 cytosolic sulfotransferase 16
LOC103853878 cytochrome P450 79B1
LOC103854698 myrosinase
LOC103854699 myrosinase
LOC103854724 myrosinase-like
LOC103854829 myrosinase-like
LOC103855298 esterase OVCA2
LOC103857007 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial-like
LOC103857757 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic
LOC103859689 dihydrolipoyl dehydrogenase 1, chloroplastic
LOC103859923 UDP-glycosyltransferase 71B2-like
LOC103860090 myrosinase-like
LOC103862389 catalase-2
LOC103862462 aldehyde dehydrogenase family 3 member F1-like
LOC103862605 cytochrome P450 79B1-like
LOC103864103 DJ-1 protein homolog E
LOC103864127 uncharacterized LOC103864127
LOC103864341 tryptophan N-monooxygenase 2
LOC103865082 glutathione S-transferase F9
LOC103867094 vacuolar-sorting receptor 1-like
LOC103868913 acetyltransferase NSI
LOC103868958 ATP sulfurylase 1, chloroplastic-like
LOC103869701 dihydrolipoyl dehydrogenase 2, mitochondrial
LOC103870046 dihydrolipoyl dehydrogenase 2, chloroplastic
LOC103872656 cytosolic sulfotransferase 17
LOC103873557 aldehyde dehydrogenase family 2 member B4, mitochondrial-like
LOC108872293 uncharacterized LOC108872293
Symbol Function*
LOC100240809 acetyl-CoA acetyltransferase, cytosolic 1
LOC100244395 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial
LOC100246037 dihydrolipoyl dehydrogenase, mitochondrial
LOC100248265 ADP,ATP carrier protein 1, mitochondrial
LOC100252622 aldehyde dehydrogenase family 7 member
LOC100257122 succinate-semialdehyde dehydrogenase, mitochondrial
LOC100259296 aldehyde dehydrogenase family 2 member B7, mitochondrial
LOC100268037 alpha-aminoadipic semialdehyde synthase
LOC100855181 acetyl-CoA acetyltransferase, cytosolic 1
Symbol Function*
LOC7472143 probable amidase At4g34880
LOC7477870 probable amidase At4g34880
Symbol Function*
LOC11406438 amidase 1
LOC11419773 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial
LOC11423972 dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial
LOC11424070 acetyl-CoA acetyltransferase, cytosolic 1
LOC11425415 ATP-citrate synthase alpha chain protein 2
LOC11437741 aldehyde dehydrogenase family 7 member A1
LOC11442277 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial
LOC11443205 aldehyde dehydrogenase family 2 member B4, mitochondrial
LOC11446438 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
LOC25481093 acetyl-CoA acetyltransferase, cytosolic 1
LOC25485608 glycerate dehydrogenase
LOC25494326 acetyl-CoA acetyltransferase, cytosolic 1


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