Representative coexpressed gene network |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath01230 |
Biosynthesis of amino acids |
32 |
|
ath00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
30 |
|
ath00360 |
Phenylalanine metabolism |
8 |
|
ath00270 |
Cysteine and methionine metabolism |
8 |
|
ath00350 |
Tyrosine metabolism |
7 |
|
|
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
gma00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
34 |
|
gma01230 |
Biosynthesis of amino acids |
34 |
|
gma00350 |
Tyrosine metabolism |
7 |
|
gma00360 |
Phenylalanine metabolism |
7 |
|
gma00950 |
Isoquinoline alkaloid biosynthesis |
7 |
|
|
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
sly01230 |
Biosynthesis of amino acids |
25 |
|
sly00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
21 |
|
sly00360 |
Phenylalanine metabolism |
6 |
|
sly00270 |
Cysteine and methionine metabolism |
5 |
|
sly01200 |
Carbon metabolism |
5 |
|
|
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
osa01230 |
Biosynthesis of amino acids |
26 |
|
osa00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
25 |
|
osa00350 |
Tyrosine metabolism |
4 |
|
osa01200 |
Carbon metabolism |
4 |
|
osa00360 |
Phenylalanine metabolism |
3 |
|
|
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
zma01230 |
Biosynthesis of amino acids |
37 |
|
zma00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
35 |
|
zma01200 |
Carbon metabolism |
5 |
|
zma00350 |
Tyrosine metabolism |
5 |
|
zma00270 |
Cysteine and methionine metabolism |
5 |
|
|
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
bra01230 |
Biosynthesis of amino acids |
42 |
|
bra00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
38 |
|
bra00260 |
Glycine, serine and threonine metabolism |
7 |
|
bra00270 |
Cysteine and methionine metabolism |
7 |
|
bra00350 |
Tyrosine metabolism |
7 |
|
|
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
vvi01230 |
Biosynthesis of amino acids |
18 |
|
vvi00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
17 |
|
vvi00350 |
Tyrosine metabolism |
5 |
|
vvi00360 |
Phenylalanine metabolism |
4 |
|
vvi00960 |
Tropane, piperidine and pyridine alkaloid biosynthesis |
4 |
|
|
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ppo01230 |
Biosynthesis of amino acids |
14 |
|
ppo00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
13 |
|
ppo00360 |
Phenylalanine metabolism |
6 |
|
ppo00350 |
Tyrosine metabolism |
4 |
|
ppo00950 |
Isoquinoline alkaloid biosynthesis |
4 |
|
|
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
mtr01230 |
Biosynthesis of amino acids |
16 |
|
mtr00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
14 |
|
mtr00260 |
Glycine, serine and threonine metabolism |
4 |
|
mtr01200 |
Carbon metabolism |
3 |
|
mtr00350 |
Tyrosine metabolism |
3 |
|
|
Gene list in the network |
|
|
Symbol |
Function* |
|
AAT |
aspartate aminotransferase glyoxysomal isozyme AAT1 precursor |
|
LOC547792 |
aspartate aminotransferase |
|
4CL2 |
4-coumarate--CoA ligase 2 |
|
LOC732570 |
chorismate synthase |
|
LOC100500611 |
cytochrome b5 |
|
LOC100776446 |
bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase |
|
LOC100778729 |
anthranilate synthase beta subunit 2, chloroplastic |
|
LOC100778835 |
protein DETOXIFICATION 46, chloroplastic |
|
LOC100781285 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic |
|
LOC100781618 |
anthranilate synthase beta subunit 2, chloroplastic |
|
LOC100783691 |
anthranilate synthase alpha subunit 2, chloroplastic |
|
LOC100784290 |
shikimate kinase 1, chloroplastic |
|
LOC100784392 |
probable aminotransferase TAT2 |
|
LOC100784846 |
arogenate dehydratase/prephenate dehydratase 1, chloroplastic |
|
LOC100785132 |
probable aminotransferase TAT2 |
|
LOC100785661 |
caffeoylshikimate esterase |
|
LOC100788172 |
indole-3-glycerol phosphate synthase, chloroplastic |
|
LOC100789268 |
3-phosphoshikimate 1-carboxyvinyltransferase 2 |
|
LOC100790882 |
indole-3-glycerol phosphate synthase, chloroplastic |
|
LOC100791341 |
chorismate mutase 2 |
|
LOC100792812 |
tryptophan synthase beta chain 1 |
|
LOC100793028 |
chorismate mutase 1, chloroplastic |
|
LOC100795745 |
ATP-citrate synthase beta chain protein 1 |
|
LOC100797019 |
phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic |
|
LOC100797299 |
chorismate mutase 1, chloroplastic |
|
LOC100797636 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic |
|
LOC100800074 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic |
|
LOC100800904 |
ATP-citrate synthase beta chain protein 1 |
|
LOC100801288 |
tryptophan synthase beta chain 1 |
|
LOC100801361 |
bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase |
|
ADH1 |
arogenate dehydrogenase 1, chloroplastic-like |
|
TYRA-A |
arogenate dehydrogenase 2 |
|
LOC100806628 |
3-dehydroquinate synthase |
|
LOC100807194 |
3-ketoacyl-CoA thiolase 2, peroxisomal |
|
LOC100808361 |
chorismate mutase, chloroplastic-like |
|
LOC100809331 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic |
|
LOC100809567 |
phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like |
|
LOC100811089 |
3-phosphoshikimate 1-carboxyvinyltransferase 2 |
|
LOC100811217 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic |
|
LOC100811514 |
aspartate aminotransferase P2, mitochondrial |
|
LOC100812989 |
3-dehydroquinate synthase-like |
|
LOC100814518 |
chorismate synthase, chloroplastic |
|
|
Symbol |
Function* |
|
LOC543548 |
dehydroquinate dehydratase/shikimate:NADP oxidoreductase |
|
LOC543977 |
5-enolpyruvylshikimate-3-phosphate synthase |
|
SK |
shikimate kinase precursor |
|
CS2 |
chorismate synthase 2 |
|
LOC544153 |
phospho-2-dehydro-3-deoxyheptonate aldolase |
|
CS1 |
chorismate synthase 1 |
|
DHQS |
dehydroquinate synthase |
|
mMDH1 |
malate dehydrogenase 1 |
|
PAT |
prephenate aminotransferase |
|
LOC101243656 |
phenylalanine ammonia-lyase 6 |
|
LOC101243843 |
chorismate mutase 1, chloroplastic |
|
LOC101244094 |
aspartate aminotransferase, mitochondrial |
|
LOC101244841 |
anthranilate synthase beta subunit 2, chloroplastic-like |
|
LOC101245012 |
S-adenosylmethionine synthase 3-like |
|
LOC101245200 |
cryptochrome DASH family protein |
|
LOC101247331 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like |
|
LOC101247693 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic |
|
LOC101247914 |
3-isopropylmalate dehydrogenase, chloroplastic |
|
LOC101249507 |
glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform |
|
LOC101249935 |
S-alkyl-thiohydroximate lyase-like |
|
LOC101250390 |
indole-3-glycerol phosphate synthase, chloroplastic |
|
LOC101252192 |
LL-diaminopimelate aminotransferase, chloroplastic |
|
LOC101254287 |
caffeoylshikimate esterase |
|
LOC101255433 |
tryptophan synthase alpha chain |
|
LOC101256529 |
tryptophan synthase beta chain 1 |
|
LOC101257271 |
anthranilate phosphoribosyltransferase, chloroplastic |
|
LOC101258500 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic |
|
LOC101260925 |
histidinol-phosphate aminotransferase, chloroplastic |
|
LOC101261642 |
aspartate aminotransferase, chloroplastic |
|
LOC101263879 |
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 |
|
LOC101264818 |
serine hydroxymethyltransferase, mitochondrial |
|
LOC101268702 |
receptor-like serine/threonine-protein kinase ALE2 |
|
LOC101268828 |
probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 |
|
|
Symbol |
Function* |
|
LOC4324718 |
ribose-phosphate pyrophosphokinase 3, chloroplastic-like |
|
LOC4324941 |
bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase |
|
LOC4325444 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic |
|
LOC4325621 |
aspartate aminotransferase, cytoplasmic-like |
|
LOC4325928 |
ADP,ATP carrier protein 2, chloroplastic |
|
LOC4326889 |
chorismate mutase 3, chloroplastic |
|
LOC4328957 |
N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic |
|
LOC4330090 |
alcohol dehydrogenase-like 6 |
|
LOC4330732 |
shikimate kinase 1, chloroplastic-like |
|
LOC4331468 |
anthranilate phosphoribosyltransferase, chloroplastic |
|
LOC4332286 |
chorismate synthase 2, chloroplastic |
|
LOC4332341 |
anthranilate synthase alpha subunit 2, chloroplastic-like |
|
LOC4333014 |
phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like |
|
LOC4333918 |
anthranilate synthase beta subunit 2, chloroplastic-like |
|
LOC4334554 |
probable methylenetetrahydrofolate reductase |
|
LOC4335756 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic |
|
LOC4336076 |
anthranilate synthase beta subunit 1, chloroplastic-like |
|
LOC4337165 |
shikimate kinase 3, chloroplastic-like |
|
LOC4338960 |
probable anion transporter 2, chloroplastic |
|
LOC4339188 |
cytochrome P450 98A1 |
|
LOC4340026 |
3-phosphoshikimate 1-carboxyvinyltransferase 2 |
|
LOC4340547 |
shikimate kinase 2, chloroplastic-like |
|
LOC4341252 |
aspartate aminotransferase, mitochondrial |
|
LOC4341584 |
tryptophan synthase beta chain 2 |
|
LOC4342571 |
tryptophan synthase alpha chain |
|
LOC4343946 |
phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like |
|
LOC4344612 |
tryptophan synthase beta chain 1 |
|
LOC4345257 |
indole-3-glycerol phosphate synthase, chloroplastic |
|
LOC4346529 |
indole-3-glycerol phosphate synthase |
|
LOC4347717 |
3-dehydroquinate synthase, chloroplastic |
|
LOC4348524 |
alanine aminotransferase 2 |
|
LOC4349639 |
calcium uniporter protein 6, mitochondrial |
|
LOC4351945 |
tryptamine 5-hydroxylase-like |
|
LOC4352411 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic |
|
LOC9270732 |
thioredoxin M3, chloroplastic-like |
|
|
|
Symbol |
Function* |
|
LOC103828167 |
shikimate O-hydroxycinnamoyltransferase |
|
LOC103831882 |
cytosolic sulfotransferase 18 |
|
LOC103832136 |
indole glucosinolate O-methyltransferase 5-like |
|
LOC103832977 |
chorismate synthase, chloroplastic |
|
LOC103834946 |
phosphoserine aminotransferase 1, chloroplastic |
|
LOC103835440 |
anthranilate synthase beta subunit 1, chloroplastic |
|
LOC103835703 |
phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like |
|
LOC103836728 |
tryptophan synthase alpha chain |
|
LOC103837332 |
glutathione synthetase, chloroplastic |
|
LOC103837510 |
SAL1 phosphatase-like |
|
LOC103837671 |
3-dehydroquinate synthase, chloroplastic |
|
LOC103837904 |
bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase |
|
LOC103838043 |
aspartate aminotransferase, cytoplasmic isozyme 2 |
|
LOC103839088 |
anthranilate synthase beta subunit 1, chloroplastic-like |
|
LOC103840683 |
glutathione S-transferase U13-like |
|
LOC103841367 |
tryptophan synthase alpha chain, chloroplastic |
|
LOC103841734 |
ketol-acid reductoisomerase, chloroplastic-like |
|
LOC103842591 |
tyrosine aminotransferase-like |
|
LOC103842888 |
arogenate dehydrogenase 2, chloroplastic |
|
LOC103843407 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like |
|
LOC103844930 |
thiamine thiazole synthase, chloroplastic |
|
LOC103844934 |
tryptophan synthase beta chain 1, chloroplastic |
|
LOC103845522 |
arogenate dehydratase 5, chloroplastic |
|
LOC103845884 |
anthranilate phosphoribosyltransferase, chloroplastic |
|
LOC103846297 |
phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic |
|
LOC103846914 |
anthranilate synthase alpha subunit 1, chloroplastic |
|
LOC103849983 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic |
|
LOC103850170 |
shikimate kinase 2, chloroplastic |
|
LOC103851145 |
anthranilate phosphoribosyltransferase, chloroplastic |
|
LOC103851454 |
arogenate dehydratase 5, chloroplastic-like |
|
LOC103852737 |
histidinol-phosphate aminotransferase 1, chloroplastic |
|
LOC103854257 |
phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic |
|
LOC103854474 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like |
|
LOC103855638 |
anthranilate synthase alpha subunit 1, chloroplastic |
|
LOC103857960 |
cytochrome P450 98A3 |
|
LOC103858170 |
3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic-like |
|
LOC103858362 |
probable aminotransferase TAT3 |
|
LOC103859154 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like |
|
LOC103860298 |
indole-3-glycerol phosphate synthase, chloroplastic |
|
LOC103861672 |
tryptophan synthase beta chain 2, chloroplastic |
|
LOC103861864 |
peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like |
|
LOC103862328 |
D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like |
|
LOC103863791 |
tryptophan synthase beta chain 2-like |
|
LOC103864307 |
shikimate kinase 1, chloroplastic |
|
LOC103864337 |
bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like |
|
LOC103866199 |
3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic |
|
LOC103867363 |
ribose-phosphate pyrophosphokinase 1, chloroplastic |
|
LOC103868301 |
tyrosine aminotransferase |
|
LOC103868556 |
4-coumarate--CoA ligase 1 |
|
LOC103868667 |
chorismate synthase, chloroplastic-like |
|
LOC103869052 |
phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic |
|
LOC103871852 |
ribose-phosphate pyrophosphokinase 3, chloroplastic |
|
LOC103871931 |
arogenate dehydratase/prephenate dehydratase 1, chloroplastic |
|
LOC103872898 |
uncharacterized LOC103872898 |
|
|
Symbol |
Function* |
|
LOC100232912 |
5-enolpyruvylshikimate-3-phosphate synthase |
|
LOC100233115 |
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 02 |
|
LOC100240939 |
ATP-citrate synthase alpha chain protein 2 |
|
LOC100241015 |
chorismate synthase 1, chloroplastic |
|
LOC100242360 |
protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic |
|
LOC100243536 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic |
|
LOC100244261 |
shikimate kinase 3, chloroplastic |
|
LOC100245164 |
arogenate dehydratase/prephenate dehydratase 1, chloroplastic |
|
LOC100245371 |
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase |
|
LOC100245826 |
bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase |
|
LOC100246248 |
protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic |
|
LOC100246657 |
fumarylacetoacetase |
|
LOC100247288 |
acetyl-CoA carboxylase 1 |
|
LOC100248095 |
caffeoylshikimate esterase |
|
LOC100250501 |
random slug protein 5 |
|
LOC100251045 |
indole-3-glycerol phosphate synthase, chloroplastic |
|
LOC100253493 |
trans-cinnamate 4-monooxygenase-like |
|
LOC100253759 |
probable alkaline/neutral invertase B |
|
LOC100254127 |
aspartate aminotransferase, mitochondrial |
|
LOC100254698 |
4-coumarate--CoA ligase 2 |
|
LOC100255576 |
histidinol-phosphate aminotransferase, chloroplastic |
|
LOC100257728 |
anthranilate synthase beta subunit 1, chloroplastic |
|
LOC100258475 |
3-deoxy-D-arabino-heptulosonate-7-phosphate synthase |
|
LOC100261782 |
caffeoylshikimate esterase |
|
LOC100262298 |
nudix hydrolase 15, mitochondrial |
|
LOC100262762 |
shikimate kinase |
|
LOC100265746 |
protein DETOXIFICATION 46, chloroplastic |
|
LOC100266026 |
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 |
|
LOC100266137 |
3-dehydroquinate synthase-like |
|
LOC100266283 |
chorismate mutase 02 |
|
LOC100267022 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like |
|
LOC104882479 |
bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase |
|
|
Symbol |
Function* |
|
LOC7453965 |
3-phosphoshikimate 1-carboxyvinyltransferase 2 |
|
LOC7455197 |
phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic |
|
LOC7457872 |
chorismate synthase, chloroplastic |
|
LOC7458772 |
aspartate aminotransferase, cytoplasmic |
|
LOC7463204 |
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase |
|
LOC7468079 |
aspartate aminotransferase, mitochondrial |
|
LOC7468413 |
chorismate synthase, chloroplastic |
|
LOC7468890 |
phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic |
|
LOC7471529 |
bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase |
|
LOC7472319 |
pyruvate decarboxylase 1 |
|
LOC7473892 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic |
|
LOC7474454 |
peroxisomal nicotinamide adenine dinucleotide carrier |
|
LOC7475389 |
bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic |
|
LOC7475727 |
caffeoylshikimate esterase |
|
LOC7478083 |
hydroxymethylglutaryl-CoA synthase |
|
LOC7478621 |
arogenate dehydratase/prephenate dehydratase 6, chloroplastic |
|
LOC7479878 |
phenylalanine ammonia-lyase G4 |
|
LOC7481465 |
3-ketoacyl-CoA thiolase 2, peroxisomal |
|
LOC7483919 |
nudix hydrolase 1 |
|
LOC7486337 |
shikimate kinase 1, chloroplastic |
|
LOC7486485 |
phenylalanine ammonia-lyase |
|
LOC7490231 |
bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase |
|
|