KEGG 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar) mtr(Medicago)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 9
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
ath00999 Biosynthesis of secondary metabolites - unclassified 3
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 27
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 21
gma00941 Flavonoid biosynthesis 20
gma00999 Biosynthesis of secondary metabolites - unclassified 10
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 19
sly00941 Flavonoid biosynthesis 16
sly00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 16
sly00999 Biosynthesis of secondary metabolites - unclassified 7
sly00360 Phenylalanine metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 8
osa00941 Flavonoid biosynthesis 5
osa00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
osa00999 Biosynthesis of secondary metabolites - unclassified 3
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 13
zma00941 Flavonoid biosynthesis 12
zma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 12
zma00999 Biosynthesis of secondary metabolites - unclassified 5
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 17
bra00941 Flavonoid biosynthesis 10
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 10
bra00999 Biosynthesis of secondary metabolites - unclassified 7
bra01230 Biosynthesis of amino acids 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 11
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 9
vvi00941 Flavonoid biosynthesis 9
vvi00999 Biosynthesis of secondary metabolites - unclassified 5
vvi04712 Circadian rhythm - plant 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00940 Phenylpropanoid biosynthesis 4
ppo00941 Flavonoid biosynthesis 3
ppo00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
ppo00999 Biosynthesis of secondary metabolites - unclassified 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 3
mtr00941 Flavonoid biosynthesis 2
mtr00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Gene list in the network
Symbol Function*
C4H cinnamate-4-hydroxylase
PAL1 PHE ammonia lyase 1
CYP98A3 cytochrome P450, family 98, subfamily A, polypeptide 3
AT4G06744 Leucine-rich repeat (LRR) family protein
CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
CAD5 cinnamyl alcohol dehydrogenase 5
HCT hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
CCR1 cinnamoyl coa reductase 1
4CL1 4-coumarate:CoA ligase 1
LysoPL2 lysophospholipase 2
Symbol Function*
4CL2 4-coumarate--CoA ligase 2
4CL1 4-coumarate:coenzyme A ligase
CYP98A2 cytochrome P450 98A2
DFR2 dihydroflavonol-4-reductase
LOC100037474 aureusidin synthase
C4H trans-cinnamate 4-monooxygenase
LOC100777558 probable cinnamyl alcohol dehydrogenase
LOC100777680 spermidine hydroxycinnamoyl transferase
LOC100778626 spermidine hydroxycinnamoyl transferase
LOC100779260 caffeoyl-CoA O-methyltransferase
LOC100779280 spermidine hydroxycinnamoyl transferase
LOC100779814 spermidine hydroxycinnamoyl transferase
LOC100780516 probable caffeoyl-CoA O-methyltransferase At4g26220
LOC100781008 probable O-methyltransferase 3
LOC100785661 caffeoylshikimate esterase
LOC100788434 spermidine hydroxycinnamoyl transferase
LOC100788506 cellulose synthase-like protein G1
LOC100789070 bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like
LOC100792103 transcription factor MYB20
OMT5 anthocyanin 3'-O-methyltransferase
CCR cinnamoyl-CoA reductase
LOC100798236 extradiol ring-cleavage dioxygenase-like
LOC100799303 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
LOC100803418 spermidine hydroxycinnamoyl transferase
LOC100803624 transcription factor MYB20
LOC100804892 probable cinnamyl alcohol dehydrogenase
LOC100806561 shikimate O-hydroxycinnamoyltransferase
LOC100808134 probable O-methyltransferase 3
LOC100808660 eugenol O-methyltransferase-like
LOC100810341 trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
LOC100811080 cytochrome P450 98A2
LOC100811247 caffeoyl-CoA O-methyltransferase
LOC100814459 spermidine hydroxycinnamoyl transferase
LOC100816053 UDP-glucosyl transferase 73B2
LOC100817837 uncharacterized LOC100817837
LOC100818985 trans-cinnamate 4-monooxygenase
LOC100819192 4-coumarate--CoA ligase 1
LOC100820075 shikimate O-hydroxycinnamoyltransferase
LOC102663900 spermidine hydroxycinnamoyl transferase
Symbol Function*
LOC544153 phospho-2-dehydro-3-deoxyheptonate aldolase
hqt hydroxycinnamoyl CoA quinate transferase
LOC101243656 phenylalanine ammonia-lyase 6
LOC101244196 trans-cinnamate 4-monooxygenase
LOC101244496 trans-cinnamate 4-monooxygenase
LOC101246092 p-coumaroyl quinate/shikimate 3'-hydroxylase
PAL2 phenylalanine ammonia-lyase 2
LOC101251790 protein DETOXIFICATION 29-like
LOC101253032 caffeoyl-CoA O-methyltransferase 5
LOC101253556 agmatine hydroxycinnamoyltransferase 1-like
LOC101253859 agmatine hydroxycinnamoyltransferase 1-like
LOC101254287 caffeoylshikimate esterase
LOC101256271 shikimate O-hydroxycinnamoyltransferase
LOC101260278 caffeoyl-CoA O-methyltransferase 6
LOC101262367 cytochrome P450 98A2-like
LOC101264440 CBL-interacting serine/threonine-protein kinase 6
LOC101265187 caffeoyl-CoA O-methyltransferase-like
LOC101265690 caffeoyl-CoA O-methyltransferase
LOC101265977 caffeoyl-CoA O-methyltransferase
LOC101266953 vinorine synthase
LOC104648161 salutaridinol 7-O-acetyltransferase-like
LOC104648251 salutaridinol 7-O-acetyltransferase-like
Symbol Function*
LOC4326996 S-adenosylmethionine synthase 2-like
LOC4328485 probable 4-coumarate--CoA ligase 3
LOC4328552 cinnamyl alcohol dehydrogenase 2-like
LOC4329959 hydroxycinnamoyltransferase 2-like
LOC4330036 phenylalanine ammonia-lyase
LOC4336306 hydroxycinnamoyltransferase 1-like
LOC4338409 trans-cinnamate 4-monooxygenase
LOC4339188 cytochrome P450 98A1
LOC4340240 caffeoyl-CoA O-methyltransferase 1
LOC4345934 tricin synthase 1-like
Symbol Function*
LOC542166 4-coumarate--CoA ligase 1
LOC100125646 catechol-O-methyltransferase
LOC100191686 uncharacterized LOC100191686
LOC100194386 uncharacterized LOC100194386
LOC100272756 putative cytochrome P450 superfamily protein
LOC100272801 putative cytochrome P450 superfamily protein
LOC100273683 uncharacterized LOC100273683
LOC100274274 putative cytochrome P450 superfamily protein
LOC100279386 uncharacterized LOC100279386
LOC100279986 Spermidine hydroxycinnamoyl transferase
LOC100281324 uncharacterized LOC100281324
LOC100283536 uncharacterized LOC100283536
LOC100304329 shikimate O-hydroxycinnamoyltransferase
LOC103649769 putrescine hydroxycinnamoyltransferase 1
LOC103649816 putrescine hydroxycinnamoyltransferase 1
LOC103649821 putrescine hydroxycinnamoyltransferase 1
LOC107282093 Caffeoyl-CoA O-methyltransferase1
Symbol Function*
LOC103828167 shikimate O-hydroxycinnamoyltransferase
LOC103832977 chorismate synthase, chloroplastic
LOC103834443 caffeoyl-CoA O-methyltransferase 1
LOC103837205 chorismate mutase 1, chloroplastic-like
LOC103840961 inverted formin-2
LOC103841251 phenylalanine ammonia-lyase 2
LOC103852438 putative caffeoyl-CoA O-methyltransferase At1g67980
LOC103857055 flavone 3'-O-methyltransferase 1
LOC103857323 trans-cinnamate 4-monooxygenase-like
LOC103857642 S-adenosylmethionine synthase 3
LOC103857960 cytochrome P450 98A3
LOC103862317 caffeoyl-CoA O-methyltransferase 1
LOC103862330 cinnamyl alcohol dehydrogenase 5
LOC103865043 trans-cinnamate 4-monooxygenase-like
LOC103865564 S-adenosylmethionine synthase 3-like
LOC103865574 phenylalanine ammonia-lyase 1
LOC103865848 cytochrome P450 98A3
LOC103867229 phenylalanine ammonia-lyase 1
LOC103867954 trans-cinnamate 4-monooxygenase
LOC103868556 4-coumarate--CoA ligase 1
LOC103869052 phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
LOC103871191 caffeoylshikimate esterase
LOC103874054 spermidine hydroxycinnamoyl transferase-like
Symbol Function*
STS stilbene synthase
LOC100233087 caffeoyl-CoA O-methyltransferase
LOC100241377 phenylalanine ammonia-lyase
LOC100242903 stilbene synthase 4
STS stilbene synthase
LOC100243978 caffeoyl-CoA O-methyltransferase
LOC100246160 myb-related protein Myb4
LOC100246283 stilbene synthase 5
LOC100251137 phenylalanine ammonia-lyase
LOC100251539 cytochrome P450 CYP73A100
LOC100251623 cinnamoyl-CoA reductase 1
LOC100254045 stilbene synthase 4-like
LOC100254698 4-coumarate--CoA ligase 2
LOC100263633 cytochrome P450 98A2
LOC100265530 shikimate O-hydroxycinnamoyltransferase
LOC100267215 cytochrome P450 CYP73A100
LOC100853675 stilbene synthase 4
LOC100854172 caffeic acid 3-O-methyltransferase
Symbol Function*
LOC7457542 caffeoyl-CoA O-methyltransferase 1
LOC7492044 caffeoyl-CoA O-methyltransferase 2
LOC7492102 transcription factor MYB10
LOC7493466 caffeic acid 3-O-methyltransferase 1
LOC7495679 cytochrome P450 98A2
Symbol Function*
LOC11445793 caffeoylshikimate esterase
LOC11446939 caffeoyl-CoA O-methyltransferase
LOC25491195 shikimate O-hydroxycinnamoyltransferase


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