KEGG 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 9
ath01230 Biosynthesis of amino acids 5
ath00270 Cysteine and methionine metabolism 4
ath00350 Tyrosine metabolism 4
ath00360 Phenylalanine metabolism 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00960 Tropane, piperidine and pyridine alkaloid biosynthesis 12
gma00350 Tyrosine metabolism 10
gma00360 Phenylalanine metabolism 10
gma00950 Isoquinoline alkaloid biosynthesis 10
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00960 Tropane, piperidine and pyridine alkaloid biosynthesis 8
sly01230 Biosynthesis of amino acids 5
sly00350 Tyrosine metabolism 4
sly00360 Phenylalanine metabolism 4
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00960 Tropane, piperidine and pyridine alkaloid biosynthesis 6
osa00350 Tyrosine metabolism 4
osa00360 Phenylalanine metabolism 4
osa00950 Isoquinoline alkaloid biosynthesis 4
osa00220 Arginine biosynthesis 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00350 Tyrosine metabolism 2
zma00360 Phenylalanine metabolism 2
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma00950 Isoquinoline alkaloid biosynthesis 2
zma00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00960 Tropane, piperidine and pyridine alkaloid biosynthesis 10
bra00350 Tyrosine metabolism 5
bra00360 Phenylalanine metabolism 5
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bra00950 Isoquinoline alkaloid biosynthesis 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 10
vvi00350 Tyrosine metabolism 6
vvi00360 Phenylalanine metabolism 6
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
vvi01230 Biosynthesis of amino acids 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00270 Cysteine and methionine metabolism 2
ppo00330 Arginine and proline metabolism 2
ppo00350 Tyrosine metabolism 2
Gene list in the network
Symbol Function*
AT2G29290 NAD(P)-binding Rossmann-fold superfamily protein
AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein
AT2G29310 NAD(P)-binding Rossmann-fold superfamily protein
AT2G29320 NAD(P)-binding Rossmann-fold superfamily protein
AT2G29340 NAD-dependent epimerase/dehydratase family protein
ASP1 aspartate aminotransferase 1
FBA5 Aldolase superfamily protein
ASP5 aspartate aminotransferase 5
AT5G36160 Tyrosine transaminase family protein
TAT7 Tyrosine transaminase family protein
GSTU16 glutathione S-transferase TAU 16
Symbol Function*
PAO1 peroxisomal copper-containing amine oxidase
LOC547792 aspartate aminotransferase
DAO copper amino oxidase
LOC732570 chorismate synthase
PDIL-2 protein disulfide isomerase-like protein
LOC100775806 tropinone reductase homolog At5g06060
LOC100776446 bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
LOC100783091 copper methylamine oxidase
LOC100784392 probable aminotransferase TAT2
LOC100785132 probable aminotransferase TAT2
LOC100798399 primary amine oxidase
LOC100800777 BURP domain-containing protein BNM2A
LOC100801361 bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
LOC100811514 aspartate aminotransferase P2, mitochondrial
LOC100819646 tropinone reductase homolog
HDA14 histone deacetylase
Symbol Function*
pmt putrescine N-methyltransferase
PAT prephenate aminotransferase
LOC101246642 tropinone reductase homolog At5g06060-like
LOC101246937 tropinone reductase homolog At5g06060-like
LOC101247232 tropinone reductase homolog At5g06060
LOC101251790 protein DETOXIFICATION 29-like
LOC101252192 LL-diaminopimelate aminotransferase, chloroplastic
LOC101254319 copper methylamine oxidase-like
LOC101260925 histidinol-phosphate aminotransferase, chloroplastic
LOC101261642 aspartate aminotransferase, chloroplastic
LOC101264818 serine hydroxymethyltransferase, mitochondrial
Symbol Function*
LOC4325621 aspartate aminotransferase, cytoplasmic-like
LOC4332375 tropinone reductase homolog At5g06060
LOC4332377 tropinone reductase homolog At5g06060
LOC4340945 primary amine oxidase 2
LOC4341252 aspartate aminotransferase, mitochondrial
LOC4343673 primary amine oxidase 2
LOC4346129 nucleotide pyrophosphatase/phosphodiesterase
LOC4348524 alanine aminotransferase 2
Symbol Function*
LOC100191335 ferric-chelate reductase (NADH)1
LOC100274119 aspartate aminotransferase
LOC100274472 uncharacterized LOC100274472
Symbol Function*
LOC103830009 probable aldo-keto reductase 6
LOC103837904 bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
LOC103844930 thiamine thiazole synthase, chloroplastic
LOC103848200 aspartate aminotransferase, cytoplasmic isozyme 2-like
LOC103852316 tropinone reductase homolog At1g07440-like
LOC103858362 probable aminotransferase TAT3
LOC103863102 protein SRG1-like
LOC103864337 bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like
LOC103864955 tropinone reductase homolog At2g29310-like
LOC103864959 tropinone reductase homolog At2g29340-like
LOC103864964 tropinone reductase-like
LOC103868038 tropinone reductase homolog At2g30670-like
LOC103868301 tyrosine aminotransferase
Symbol Function*
LOC100232912 5-enolpyruvylshikimate-3-phosphate synthase
LOC100245826 bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
LOC100251211 primary amine oxidase
LOC100251860 tropinone reductase homolog At5g06060
LOC100255576 histidinol-phosphate aminotransferase, chloroplastic
LOC100256366 primary amine oxidase
LOC100259032 tyrosine aminotransferase
LOC100259474 probable enoyl-CoA hydratase 2, mitochondrial
LOC100260356 tropinone reductase homolog At5g06060
LOC100261782 caffeoylshikimate esterase
LOC100262098 tropinone reductase homolog At5g06060
LOC100854903 uncharacterized LOC100854903
LOC100855239 tropinone reductase homolog At5g06060
LOC104882479 bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
Symbol Function*
LOC7458772 aspartate aminotransferase, cytoplasmic
LOC7468079 aspartate aminotransferase, mitochondrial
LOC7472319 pyruvate decarboxylase 1


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