KEGG 03020 RNA polymerase
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar) mtr(Medicago)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 17
ath03008 Ribosome biogenesis in eukaryotes 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 35
gma03010 Ribosome 2
gma03040 Spliceosome 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 13
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 20
osa03008 Ribosome biogenesis in eukaryotes 3
osa03040 Spliceosome 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 11
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 20
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 7
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 6
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 15
Gene list in the network
Symbol Function*
NRPB6B RNA polymerase Rpb6
NRPB3 DNA-directed RNA polymerase family protein
AT2G18900 Transducin/WD40 repeat-like superfamily protein
AT3G06530 ARM repeat superfamily protein
AT3G13940 DNA binding / DNA-directed RNA polymerase
NRPB5 Eukaryotic rpb5 RNA polymerase subunit family protein
AT3G25940 TFIIB zinc-binding protein
NRPA1 nuclear RNA polymerase A1
ELP6 elongator protein 6
AT4G01590 DNA-directed RNA polymerase III subunit
EMB2788 ribosome 60S biogenesis amino-terminal protein
AT5G09380 RNA polymerase III RPC4
NRPB12 DNA directed RNA polymerase, 7 kDa subunit
NRPC2 nuclear RNA polymerase C2
NRPB6A RNA polymerase Rpb6
NRPC1 nuclear RNA polymerase C1
AT1G06790 RNA polymerase Rpb7 N-terminal domain-containing protein
NRPB10 RNA polymerases N / 8 kDa subunit
NRPA2 nuclear RNA polymerase A2
AT1G60080 3'-5'-exoribonuclease family protein
RPAC43 RNA polymerase I subunit 43
ATRPAC42 DNA-directed RNA polymerase family protein
AT1G67120 midasin-like protein
AT1G75670 DNA-directed RNA polymerase
AT1G80890 GAG1At protein
AT1G04945 HIT-type Zinc finger family protein
AT4G22285 Ubiquitin C-terminal hydrolases superfamily protein
Symbol Function*
RNA polymerase II DNA-directed RNA polymerase II subunit RPB7
LOC100305785 mitochondrial import receptor subunit TOM6 homolog
LOC100306098 uncharacterized LOC100306098
LOC100499661 uncharacterized LOC100499661
LOC100499667 uncharacterized LOC100499667
LOC100499757 40S ribosomal protein S7
LOC100499860 uncharacterized LOC100499860
LOC100500196 pentatricopeptide repeat-containing protein
LOC100500197 cytochrome c oxidase-assembly factor COX23, mitochondrial
LOC100500203 putative small nuclear ribonucleoprotein Sm D2
LOC100527000 DNA-directed RNA polymerase subunit 10-like protein
LOC100527062 DNA-directed RNA polymerase III subunit RPC9a-like
LOC100527316 DNA-directed RNA polymerase II subunit
LOC100527576 Sel1 repeat-containing protein
LOC100527748 uncharacterized LOC100527748
LOC100775415 DNA-directed RNA polymerase subunit 10-like protein
LOC100775535 DNA-directed RNA polymerases IV and V subunit 4
LOC100778665 RNA helicase aquarius
LOC100779047 DNA-directed RNA polymerases II, IV and V subunit 3
LOC100784219 DNA-directed RNA polymerase II subunit RPB11-like
LOC100785660 lysine--tRNA ligase, cytoplasmic
LOC100786622 DNA-directed RNA polymerases I and III subunit RPAC1-like
LOC100787575 uncharacterized LOC100787575
LOC100790162 DNA-directed RNA polymerase II subunit RPB2
LOC100790164 DNA-directed RNA polymerases II, IV and V subunit 12
LOC100792565 DNA-directed RNA polymerases II, IV and V subunit 3
LOC100793057 DNA-directed RNA polymerase II subunit RPB7
LOC100794926 DNA-directed RNA polymerases II, IV and V subunit 6A
LOC100795924 60S ribosomal protein L38
LOC100797078 DNA-directed RNA polymerase subunit 10-like protein
LOC100798309 uncharacterized LOC100798309
LOC100799938 26S proteasome regulatory subunit RPN13-like
LOC100800770 DNA-directed RNA polymerase III subunit RPC8-like
LOC100803947 DNA-directed RNA polymerase III subunit RPC3
LOC100804393 DNA-directed RNA polymerases II, IV and V subunit 11
LOC100804975 DNA-directed RNA polymerase II subunit 1
LOC100806909 DNA-directed RNA polymerases II, IV and V subunit 8B
LOC100807892 DNA-directed RNA polymerases I and III subunit RPAC2
LOC100808954 DNA-directed RNA polymerase III subunit RPC8
LOC100809792 DNA-directed RNA polymerases IV and V subunit 4
LOC100810288 DNA-directed RNA polymerase II subunit RPB2
LOC100812279 protein SAMBA
LOC100812427 DNA-directed RNA polymerase I subunit rpa49
LOC100812506 DNA-directed RNA polymerase II subunit 1
LOC100812821 putative ankyrin repeat protein RF_0381
LOC100814083 DNA-directed RNA polymerase I subunit 2
LOC100816388 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like
LOC100817089 putative RNA methyltransferase At5g10620
LOC100817982 uncharacterized LOC100817982
LOC100818494 DNA-directed RNA polymerases I and III subunit RPAC1
LOC100818974 anaphase-promoting complex subunit 6
Symbol Function*
LOC101245652 probable small nuclear ribonucleoprotein G
LOC101246880 nucleolar protein 10
LOC101248509 DNA-directed RNA polymerase III subunit rpc6
LOC101249921 DNA-directed RNA polymerases II and IV subunit 5A
LOC101251637 DNA-directed RNA polymerase III subunit 2
LOC101252245 DNA-directed RNA polymerase III subunit RPC5
LOC101252497 NAP1-related protein 2
LOC101253617 DEAD-box ATP-dependent RNA helicase 57
LOC101254152 60S ribosomal protein L34
LOC101255555 DEAD-box ATP-dependent RNA helicase 16
LOC101255881 DNA-directed RNA polymerase V subunit 5A
LOC101257966 DNA-directed RNA polymerase III subunit RPC10
LOC101259722 probable DEAD-box ATP-dependent RNA helicase 48
LOC101260591 DNA-directed RNA polymerase I subunit 1
LOC101261692 rRNA biogenesis protein RRP5
LOC101261746 DNA-directed RNA polymerase I subunit 2
LOC101262015 DNA-directed RNA polymerases I and III subunit RPAC2
LOC101264016 DNA-directed RNA polymerase II subunit 4
LOC101264221 DNA-directed RNA polymerases II, IV and V subunit 9A
LOC101265201 DNA-directed RNA polymerase III subunit 1
LOC101266977 ribosome biogenesis protein BMS1 homolog
LOC101268675 DNA-directed RNA polymerase I subunit RPA12-like
Symbol Function*
LOC4325773 uncharacterized LOC4325773
LOC4326359 uncharacterized protein At4g28440
LOC4327636 uncharacterized LOC4327636
LOC4328083 DNA-directed RNA polymerase II subunit 4
LOC4328484 probable small nuclear ribonucleoprotein F
LOC4329167 pentatricopeptide repeat-containing protein At1g09900
LOC4329714 uncharacterized LOC4329714
LOC4330570 DNA-directed RNA polymerase II subunit 4
LOC4331295 DNA-directed RNA polymerases II, IV and V subunit 9B
LOC4332531 DNA-directed RNA polymerases I and III subunit rpac1
LOC4333066 DNA-directed RNA polymerase III subunit 2
LOC4333343 DNA-directed RNA polymerases II, IV and V subunit 6A
LOC4333888 DNA-directed RNA polymerase I subunit RPA12
LOC4335691 uncharacterized LOC4335691
LOC4336254 DNA-directed RNA polymerase III subunit 1
LOC4340192 rRNA-processing protein FCF1 homolog
LOC4341186 DEAD-box ATP-dependent RNA helicase 31-like
LOC4342517 DNA-directed RNA polymerases II, IV and V subunit 11
LOC4342673 rRNA biogenesis protein RRP5
LOC4342953 probable ribosome biogenesis protein RLP24
LOC4343168 DNA-directed RNA polymerases II, IV and V subunit 6A
LOC4343715 putative pentatricopeptide repeat-containing protein At3g23330
LOC4343875 glutamic acid-rich protein
LOC4346491 DNA-directed RNA polymerase 1B, mitochondrial
LOC4348797 midasin
LOC4349748 DNA-directed RNA polymerase V subunit 5A
LOC4351463 DNA-directed RNA polymerase V subunit 5A
LOC4351510 protein BUD31 homolog 3-like
LOC4351627 RNA cytidine acetyltransferase 1
LOC4351671 DNA-directed RNA polymerases I, II, and III subunit RPABC5
LOC4351715 DNA-directed RNA polymerases I and III subunit RPAC2
LOC9267635 uncharacterized LOC9267635
LOC9268125 DNA-directed RNA polymerase III subunit RPC5
LOC9269422 DNA-directed RNA polymerases II, IV and V subunit 12
LOC9270399 DNA-directed RNA polymerase I subunit 1
LOC9270457 DNA-directed RNA polymerase I subunit 2
LOC9271324 uncharacterized LOC9271324
LOC107279412 small subunit processome component 20 homolog
Symbol Function*
LOC100192928 uncharacterized LOC100192928
LOC100193056 DNA-directed RNA polymerase subunit
LOC100193880 DNA-directed RNA polymerases II and IV subunit 5A
LOC100273480 30S ribosomal protein S16-like
LOC100276274 uncharacterized LOC100276274
LOC100277195 uncharacterized LOC100277195
LOC100281008 uncharacterized LOC100281008
LOC100281783 DNA-directed RNA polymerase II 8.2 kDa polypeptide
LOC100282532 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide
LOC100283223 DNA-directed RNA polymerase II 19 kDa polypeptide
LOC100283558 uncharacterized LOC100283558
LOC100284208 transcription elongation factor SPT4
LOC100285329 DNA-directed RNA polymerase II 14.5 kDa polypeptide
LOC100285982 LSM7-like
LOC100286035 uncharacterized LOC100286035
LOC103626041 DNA-directed RNA polymerase II subunit RPB2
LOC103652836 keratin, type II cytoskeletal 5
Symbol Function*
LOC103827814 DNA-directed RNA polymerase III subunit 2
LOC103828917 DNA-directed RNA polymerase I subunit 2
LOC103830450 nuclear pore complex protein NUP96-like
LOC103832655 DNA-directed RNA polymerases II, IV and V subunit 12
LOC103836229 DNA-directed RNA polymerases I, II, and III subunit RPABC5
LOC103838484 DNA-directed RNA polymerases I and III subunit RPAC1
LOC103840544 DNA-directed RNA polymerase III subunit RPC10-like
LOC103840923 cyclin-D3-3-like
LOC103841672 DNA-directed RNA polymerase I subunit 1
LOC103841697 ras-related protein RABA1g-like
LOC103841806 DNA-directed RNA polymerases II, IV and V subunit 8B
LOC103842476 DNA-directed RNA polymerase I subunit rpa49
LOC103844364 DNA-directed RNA polymerases II, IV and V subunit 3
LOC103846550 elongator complex protein 1
LOC103846669 mechanosensitive ion channel protein 10
LOC103846853 DNA-directed RNA polymerase II subunit 4
LOC103850351 DNA-directed RNA polymerase II subunit 4
LOC103851524 DNA-directed RNA polymerase III subunit 1
LOC103851602 DNA-directed RNA polymerase II subunit 7
LOC103859322 DNA-directed RNA polymerase II subunit 2
LOC103861182 RRP12-like protein
LOC103861245 DNA-directed RNA polymerase II subunit 2-like
LOC103862024 U3 small nucleolar RNA-associated protein 20
LOC103862924 sm-like protein LSM6A
LOC103862974 uncharacterized LOC103862974
LOC103864065 20S-pre-rRNA D-site endonuclease nob1
LOC103865369 thioredoxin O1, mitochondrial
LOC103871114 uncharacterized LOC103871114
LOC103873509 uncharacterized LOC103873509
LOC103874238 DNA-directed RNA polymerase III subunit rpc6
Symbol Function*
LOC100241130 DNA-directed RNA polymerase I subunit 2
LOC100248046 DNA-directed RNA polymerases I and III subunit RPAC1
LOC100250302 pentatricopeptide repeat-containing protein At4g04790, mitochondrial
LOC100250397 DNA helicase INO80
LOC100250406 DNA-directed RNA polymerase I subunit 1
LOC100252267 DNA-directed RNA polymerase II subunit RPB2-like
LOC100252331 uncharacterized LOC100252331
LOC100262322 rRNA biogenesis protein RRP5
LOC100267354 DNA-directed RNA polymerase III subunit 1
LOC100853901 DNA-directed RNA polymerase I subunit RPA12
LOC104879248 DNA-directed RNA polymerase III subunit RPC3
Symbol Function*
LOC7457884 nucleolar complex protein 2 homolog
LOC7471115 DNA-directed RNA polymerases II, IV and V subunit 9A
LOC7474023 DNA-directed RNA polymerases II, IV and V subunit 6A
LOC7481723 DNA-directed RNA polymerase I subunit RPA12
LOC7484401 DNA-directed RNA polymerases II, IV and V subunit 6A
LOC7485677 DNA-directed RNA polymerases I and III subunit RPAC2
LOC7488382 uncharacterized LOC7488382
LOC7491348 DNA-directed RNA polymerase II subunit RPB7
Symbol Function*
LOC11405864 DNA-directed RNA polymerase subunit 10-like protein
LOC11411195 uncharacterized protein At2g39795, mitochondrial
LOC11412126 DNA-directed RNA polymerase III subunit 1
LOC11416659 DNA-directed RNA polymerases IV and V subunit 4
LOC11417477 DNA-directed RNA polymerases II, IV and V subunit 9A
LOC11418894 DNA-directed RNA polymerase II subunit 4
LOC11419143 DNA-directed RNA polymerase V subunit 5A
LOC11419754 DNA-directed RNA polymerase III subunit RPC3
LOC11419825 glutamic acid-rich protein
LOC11420496 18S rRNA (guanine-N(7))-methyltransferase RID2
LOC11429365 DNA-directed RNA polymerase III subunit RPC10
LOC11431415 splicing factor 3B subunit 6-like protein
LOC11431765 DNA-directed RNA polymerase III subunit RPC10
LOC11431978 uncharacterized protein At3g06530
LOC11435963 mitochondrial import inner membrane translocase subunit Tim13
LOC11436782 DNA-directed RNA polymerases II and IV subunit 5A
LOC11437228 DNA-directed RNA polymerases II and IV subunit 5A
LOC11437781 DNA-directed RNA polymerases I and III subunit RPAC2
LOC11444522 DNA-directed RNA polymerase I subunit 1
LOC11444744 DNA-directed RNA polymerases II, IV and V subunit 6A
LOC25479674 DNA-directed RNA polymerases II, IV and V subunit 6A
LOC25498096 haloacid dehalogenase-like hydrolase domain-containing protein 3


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