KEGG 03430 Mismatch repair
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar) mtr(Medicago)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03430 Mismatch repair 25
ath03030 DNA replication 21
ath03420 Nucleotide excision repair 17
ath03440 Homologous recombination 12
ath03410 Base excision repair 7
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 41
gma03420 Nucleotide excision repair 36
gma03030 DNA replication 35
gma03440 Homologous recombination 23
gma03410 Base excision repair 11
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03430 Mismatch repair 14
sly03030 DNA replication 13
sly03420 Nucleotide excision repair 8
sly03440 Homologous recombination 8
sly03410 Base excision repair 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 12
osa03430 Mismatch repair 12
osa03420 Nucleotide excision repair 11
osa03440 Homologous recombination 6
osa03410 Base excision repair 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 22
zma03030 DNA replication 19
zma03420 Nucleotide excision repair 17
zma03440 Homologous recombination 11
zma03410 Base excision repair 7
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 20
bra03030 DNA replication 19
bra03420 Nucleotide excision repair 16
bra03440 Homologous recombination 12
bra03410 Base excision repair 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 18
vvi03030 DNA replication 16
vvi03420 Nucleotide excision repair 14
vvi03440 Homologous recombination 8
vvi03410 Base excision repair 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03430 Mismatch repair 11
ppo03030 DNA replication 10
ppo03420 Nucleotide excision repair 9
ppo03410 Base excision repair 6
ppo03440 Homologous recombination 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03430 Mismatch repair 13
mtr03030 DNA replication 12
mtr03420 Nucleotide excision repair 10
mtr03440 Homologous recombination 6
mtr03410 Base excision repair 5
Gene list in the network
Symbol Function*
MCM5 Minichromosome maintenance (MCM2/3/5) family protein
RPA2 replicon protein A2
PCNA2 proliferating cell nuclear antigen 2
ORC2 origin recognition complex second largest subunit 2
ETG1 E2F target protein 1 (ETG1)
POLD2 DNA polymerase delta small subunit
AT3G14740 RING/FYVE/PHD zinc finger superfamily protein
HPY2 RING/U-box superfamily protein
RPA32B Replication protein A, subunit RPA32
MSH2 MUTS homolog 2
AT3G21480 BRCT domain-containing DNA repair protein
MSH1 MUTL protein homolog 1
MSH7 MUTS homolog 7
DEL1 DP-E2F-like 1
AT3G52630 Nucleic acid-binding, OB-fold-like protein
AT3G54750 downstream neighbor of Son
AT3G56870 hypothetical protein
EMB2369 tRNA synthetase class I (I, L, M and V) family protein
AT4G19130 Replication factor-A protein 1-like protein
PMS1 DNA mismatch repair protein
AT4G02110 transcription coactivator
MSH6 MUTS homolog 6
PRL Minichromosome maintenance (MCM2/3/5) family protein
AT4G23860 PHD finger protein-like protein
MSH3 homolog of DNA mismatch repair protein MSH3
AT4G28310 microtubule-associated protein
CTF7 protein CTF7
RPA70B RPA70-kDa subunit B
ABAP1 ARMADILLO BTB protein 1
RAD5 DNA/RNA helicase protein
HMGB6 high-mobility group box 6
AT5G26680 5'-3' exonuclease family protein
EMB2775 ATPase family associated with various cellular activities (AAA)
AT5G38690 Zinc-finger domain of monoamine-oxidase A repressor R1 protein
POLA3 DNA primase POLA3
CYCA3;1 Cyclin A3;1
RPA70C Replication factor-A protein 1-like protein
UBP21 ubiquitin-specific protease 21
HAG2 histone acetyltransferase of the GNAT family 2
RPA70D Replication factor-A protein 1-like protein
AT5G63960 DNA polymerase delta subunit 1
PCNA1 proliferating cellular nuclear antigen 1
LIG1 DNA ligase 1
AT1G18090 5'-3' exonuclease family protein
EMB1968 ATPase family associated with various cellular activities (AAA)
ORC6 origin recognition complex protein 6
BARD1 breast cancer associated RING 1
AT1G29630 5'-3' exonuclease family protein
RFC2 replication factor C 2
AT1G65070 DNA mismatch repair protein MutS, type 2
RFC3 replication factor C subunit 3
POLD3 DNA-directed DNA polymerase
Symbol Function*
LOC548020 ribonucleoside-diphosphate reductase large subunit
LOC548079 proliferating cell nuclear antigen
POLD1 DNA polymerase delta
LOC100305527 uncharacterized LOC100305527
LOC100306197 uncharacterized LOC100306197
LOC100499859 uncharacterized LOC100499859
LOC100499877 uncharacterized LOC100499877
LOC100499936 uncharacterized LOC100499936
LOC100499987 uncharacterized LOC100499987
LOC100500045 uncharacterized LOC100500045
LOC100500151 uncharacterized LOC100500151
LOC100526985 uncharacterized LOC100526985
LOC100775926 replication factor C subunit 2
LOC100776753 uncharacterized protein At4g28440
LOC100776965 DNA mismatch repair protein MSH7
LOC100777091 replication protein A 70 kDa DNA-binding subunit B
LOC100777539 origin recognition complex subunit 6-like
LOC100778194 uncharacterized LOC100778194
LOC100778329 DNA polymerase delta subunit 4
LOC100778597 replication protein A 70 kDa DNA-binding subunit A
LOC100778818 CDT1-like protein a, chloroplastic
LOC100780072 DNA polymerase delta small subunit
LOC100780255 DNA mismatch repair protein MLH3
LOC100781364 replication factor C subunit 2
LOC100781484 replication protein A 14 kDa subunit B
LOC100782126 deoxyuridine 5'-triphosphate nucleotidohydrolase
LOC100782652 replication factor C subunit 3
LOC100782819 replication protein A 32 kDa subunit B
LOC100782900 protein MRG1
LOC100783023 importin beta-like SAD2 homolog
LOC100783124 ARM REPEAT PROTEIN INTERACTING WITH ABF2
LOC100783155 DNA ligase 1
LOC100785030 cyclin-D3-2
LOC100788019 DNA mismatch repair protein MLH3
LOC100788117 uncharacterized protein At4g28440
LOC100788329 replication factor C subunit 2
LOC100789756 replication protein A 32 kDa subunit A
LOC100790070 replication factor C subunit 1
LOC100792904 regulator of telomere elongation helicase 1 homolog
LOC100795461 cell division control protein 45 homolog
LOC100795742 probable serine/threonine-protein kinase cdc7
LOC100797609 DNA replication complex GINS protein PSF3
LOC100798331 replication factor C subunit 2
LOC100799459 DNA polymerase delta subunit 4
LOC100801450 60S ribosomal protein L39
LOC100801694 histone chaperone ASF1B
LOC100802512 replication protein A 32 kDa subunit A
LOC100802809 replication factor C subunit 1
LOC100803989 DNA ligase 1
LOC100805951 DNA polymerase delta small subunit
LOC100808364 replication protein A 70 kDa DNA-binding subunit B
LOC100811104 DNA mismatch repair protein MSH6
LOC100812372 DNA polymerase delta subunit 3
LOC100816916 structural maintenance of chromosomes protein 6B
LOC100817379 DNA polymerase delta catalytic subunit
LOC100817651 proliferating cell nuclear antigen
LOC100817932 exonuclease 1
LOC100818329 replication factor C subunit 3-like
LOC100818437 thymidine kinase a
LOC100818859 DNA mismatch repair protein MSH7
LOC100820622 ribonucleoside-diphosphate reductase small chain
Symbol Function*
pcna proliferating cell nuclear antigen
MLH1 MLH1 protein
MSH2 mismatch repair protein
DNApolalpha DNA polymerase alpha catalytic subunit
LOC101243636 DNA replication licensing factor MCM7-like protein
LOC101244901 gamma-tubulin complex component 4
RPA32a replication protein A
LOC101245831 exonuclease 1
LOC101249065 ribonucleoside-diphosphate reductase large subunit-like
LOC101251472 uncharacterized protein At4g28440
LOC101255747 replication protein A 14 kDa subunit B-like
LOC101255870 replication protein A 70 kDa DNA-binding subunit B
LOC101256253 exonuclease 1
LOC101256302 DNA replication licensing factor MCM5
LOC101256637 DNA polymerase delta catalytic subunit
LOC101256694 protein BREAST CANCER SUSCEPTIBILITY 1 homolog
LOC101256910 general transcription factor 3C polypeptide 2
LOC101258001 DNA mismatch repair protein PMS1
LOC101258997 muscle M-line assembly protein unc-89
LOC101259776 DDT domain-containing protein DDR4
LOC101264414 WD repeat and HMG-box DNA-binding protein 1
LOC101264867 DNA replication licensing factor MCM4
LOC101266120 uncharacterized protein At4g28440-like
LOC101267413 ISWI chromatin-remodeling complex ATPase CHR11-like
LOC101268250 DNA replication licensing factor MCM3 homolog 2
LOC112941390 DNA mismatch repair protein MSH6
Symbol Function*
LOC4325354 DDT domain-containing protein DDR4
LOC4326359 uncharacterized protein At4g28440
LOC4327080 protein IWS1 homolog A
LOC4330895 replication factor C subunit 3-like
LOC4331016 DNA replication licensing factor MCM5-like
LOC4331236 replication protein A 32 kDa subunit A-like
LOC4332052 replication protein A 70 kDa DNA-binding subunit B-like
LOC4334389 replication factor C subunit 5-like
LOC4342292 protein HGV2
LOC4344464 chromatin assembly factor 1 subunit FAS2 homolog
LOC4346812 probable histone acetyltransferase type B catalytic subunit
LOC4347016 DNA mismatch repair protein MSH6
LOC4347604 uncharacterized LOC4347604
LOC4347721 SKP1-like protein 1
LOC4348965 DNA ligase 1
LOC4349968 DNA polymerase delta catalytic subunit-like
LOC4350754 replication factor C subunit 1-like
LOC4351654 replication factor C subunit 2-like
LOC9270179 histone H3.v1
LOC9272726 uncharacterized LOC9272726
Symbol Function*
LOC541878 diphosphonucleotide phosphatase 2
LOC542006 MutS homolog 2
LOC542357 proliferating cell nuclear antigen 2
LOC542425 proliferating cell nuclear antigen 1
LOC542626 mismatch binding protein Mus3
LOC542738 replication origin activator 2
LOC100191435 Pseudouridine synthase family protein
LOC100192012 uncharacterized LOC100192012
LOC100194009 uncharacterized LOC100194009
LOC100194011 DNA-directed DNA polymerases
LOC100216703 replication factor C subunit 3
LOC100272286 uncharacterized LOC100272286
LOC100273584 Replication protein A DNA-binding subunit
LOC100275065 uncharacterized LOC100275065
LOC100279876 MutS homolog 1
LOC100280053 cyclin superfamily protein, putative
LOC100282197 replication factor C subunit 2
LOC100282822 uncharacterized LOC100282822
LOC100283190 OB-fold nucleic acid binding domain containing protein
LOC100283481 uncharacterized LOC100283481
LOC100283737 OB-fold nucleic acid binding domain containing protein
LOC100284400 chaperone protein dnaJ 6
LOC100285013 OB-fold nucleic acid binding domain containing protein
LOC100285903 OB-fold nucleic acid binding domain containing protein
LOC100382167 DNA polymerase delta small subunit
LOC100383890 uncharacterized LOC100383890
LOC103625817 replication factor C subunit 5
LOC103635146 poly [ADP-ribose] polymerase 2-like
LOC103636271 DNA mismatch repair protein MLH1
LOC103637892 STOREKEEPER protein
LOC103648088 replication factor C subunit 1
LOC103653563 DNA repair protein RAD50
LOC103653697 DNA mismatch repair protein PMS1
LOC103654581 DNA polymerase delta catalytic subunit
Symbol Function*
LOC103829539 DNA polymerase alpha catalytic subunit
LOC103831716 DNA mismatch repair protein MSH7
LOC103831972 RNA polymerase II subunit 5-mediating protein homolog
LOC103832343 DNA polymerase delta subunit 3
LOC103834767 uncharacterized LOC103834767
LOC103835735 replication factor C subunit 4-like
LOC103836986 prohibitin-4, mitochondrial
LOC103837365 replication protein A 70 kDa DNA-binding subunit D
LOC103838295 replication factor C subunit 2
LOC103839866 origin of replication complex subunit 1B
LOC103841802 sister chromatid cohesion 1 protein 3
LOC103843463 proliferating cell nuclear antigen
LOC103843883 replication protein A 32 kDa subunit B
LOC103846518 translocon-associated protein subunit beta-like
LOC103851417 replication factor C subunit 1
LOC103854266 fidgetin-like protein 1
LOC103854624 pre-mRNA-splicing factor SYF1
LOC103854671 replication factor C subunit 3-like
LOC103855218 DNA topoisomerase 3-alpha
LOC103855752 replication protein A 70 kDa DNA-binding subunit B
LOC103857493 putative mediator of RNA polymerase II transcription subunit 26
LOC103858405 protein MCM10 homolog
LOC103858779 DNA mismatch repair protein MSH6
LOC103859438 retinoblastoma-related protein 1-like
LOC103859754 DNA mismatch repair protein MSH2
LOC103860462 DNA replication licensing factor MCM4
LOC103860562 replication protein A 70 kDa DNA-binding subunit D
LOC103863224 histone H2A variant 1
LOC103864559 replication protein A 32 kDa subunit A
LOC103867904 CDT1-like protein a, chloroplastic
LOC103868024 proliferating cellular nuclear antigen 1
LOC103868069 ATP-dependent DNA helicase Q-like 4A
LOC103868085 uncharacterized protein At4g28440-like
LOC103869549 single-stranded DNA-binding protein, mitochondrial
LOC103870872 uncharacterized LOC103870872
LOC103870890 TIMELESS-interacting protein
LOC103871561 DNA ligase 1
LOC103871841 uncharacterized protein At4g28440
LOC103873814 DNA polymerase delta catalytic subunit
LOC103873888 chromatin assembly factor 1 subunit FAS2
Symbol Function*
LOC100241661 anaphase-promoting complex subunit 1
LOC100241865 DNA polymerase delta small subunit
LOC100242771 putative E3 ubiquitin-protein ligase UBR7
LOC100244193 replication protein A 14 kDa subunit B
LOC100245502 replication factor C subunit 4
LOC100245725 replication protein A 32 kDa subunit A
LOC100246202 replication factor C subunit 2
LOC100246530 DNA polymerase delta catalytic subunit
LOC100247946 replication factor C subunit 3
LOC100248466 proliferating cell nuclear antigen-like
LOC100249983 structural maintenance of chromosomes protein 5
LOC100250468 DNA polymerase delta subunit 3
LOC100250987 histone acetyltransferase type B catalytic subunit
LOC100251127 DNA (cytosine-5)-methyltransferase 1
LOC100254166 myosin-15
LOC100254758 replication protein A 32 kDa subunit B
LOC100255412 replication protein A 70 kDa DNA-binding subunit B
LOC100255596 DNA mismatch repair protein PMS1
LOC100255608 DNA mismatch repair protein MSH6
LOC100256907 DNA ligase 1
MSH7 DNA mismatch repair protein Msh6-2
LOC100261877 DNA replication licensing factor MCM5
LOC100263039 replication protein A 70 kDa DNA-binding subunit A
LOC100265910 chaperone protein dnaJ 6
LOC100266082 replication factor C subunit 3
LOC100266163 DNA replication licensing factor MCM2
MSH2 mismatch repair protein
Symbol Function*
LOC7457943 DNA mismatch repair protein PMS1
LOC7459070 TIMELESS-interacting protein
LOC7460974 replication factor C subunit 2
LOC7463320 DNA ligase 1
LOC7465198 ATP-dependent DNA helicase RecQ
LOC7466453 replication factor C subunit 3
LOC7466858 DNA polymerase delta catalytic subunit
LOC7478554 proliferating cell nuclear antigen
LOC7479266 replication factor C subunit 2
LOC7479528 DNA polymerase delta small subunit
LOC7481501 proliferating cell nuclear antigen
LOC7481737 cell cycle checkpoint control protein RAD9A
LOC7483976 DNA polymerase delta small subunit
LOC7484706 DNA mismatch repair protein MSH2
LOC7486350 ribonucleoside-diphosphate reductase large subunit
LOC7491255 DNA replication licensing factor MCM7
Symbol Function*
LOC11408397 DNA polymerase delta subunit 3
LOC11409734 uncharacterized LOC11409734
LOC11411391 exonuclease 1
LOC11425381 importin beta-like SAD2 homolog
LOC11432526 DNA mismatch repair protein MSH6
LOC11432620 homologous-pairing protein 2 homolog
LOC11436735 DNA mismatch repair protein MSH7
LOC11437014 DNA polymerase delta small subunit
LOC11446020 replication protein A 32 kDa subunit B
LOC25481878 replication protein A 32 kDa subunit A
LOC25485570 ribonuclease H2 subunit A
LOC25485575 replication protein A 14 kDa subunit B
LOC25489857 DNA polymerase delta catalytic subunit
LOC25490757 proliferating cell nuclear antigen
LOC25491513 uncharacterized LOC25491513
LOC25492173 replication factor C subunit 1
LOC25492370 DNA ligase 1
LOC25495823 replication factor C subunit 3
LOC25501880 DNA replication licensing factor MCM6


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