KEGG 04136 Autophagy - other
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar) mtr(Medicago)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 25
ath03015 mRNA surveillance pathway 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 42
gma03015 mRNA surveillance pathway 10
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04145 Phagosome 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 20
sly03015 mRNA surveillance pathway 3
sly04120 Ubiquitin mediated proteolysis 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 26
osa04144 Endocytosis 2
osa03015 mRNA surveillance pathway 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 24
zma03015 mRNA surveillance pathway 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 23
bra03015 mRNA surveillance pathway 3
bra00562 Inositol phosphate metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 17
vvi03015 mRNA surveillance pathway 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 25
ppo03015 mRNA surveillance pathway 7
ppo04120 Ubiquitin mediated proteolysis 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 17
mtr03015 mRNA surveillance pathway 2
Gene list in the network
Symbol Function*
AT2G19350 transmembrane protein (DUF872)
APG9 autophagy 9 (APG9)
AT2G37840 Protein kinase superfamily protein
ATH9 ABC2 homolog 9
PP2A-3 protein phosphatase 2A-3
AT2G44140 Peptidase family C54 protein
ATG8E AUTOPHAGY 8E
ATG8H Ubiquitin-like superfamily protein
APG8H Ubiquitin-like superfamily protein
ATG2 autophagy 2
AT3G23540 alpha/beta-Hydrolases superfamily protein
ATG13 Autophagy-related protein 13
AT3G51130 transmembrane protein
AT3G53930 Protein kinase superfamily protein
AT3G55070 LisH/CRA/RING-U-box domains-containing protein
AT3G59950 Peptidase family C54 protein
ATG8G Ubiquitin-like superfamily protein
ATG6 AUTOPHAGY 6
ATG8B Ubiquitin-like superfamily protein
ATG8F Ubiquitin-like superfamily protein
APG8A Ubiquitin-like superfamily protein
VPS15 protein kinase family protein / WD-40 repeat family protein
ATG18B autophagy 18 B-like protein
AT4G30790 autophagy-like protein
PRT6 proteolysis 6
UPL4 ubiquitin-protein ligase 4
APG7 ThiF family protein
ATG3 autophagy 3 (APG3)
PP2A-2 protein phosphatase 2A-2
AT1G44770 elongation factor
TOR target of rapamycin
ATG12A Ubiquitin-like superfamily protein
ATG18H autophagy 18h-like protein
PP2A-1 protein phosphatase 2A-2
ATG8C Ubiquitin-like superfamily protein
VPS35B VPS35 homolog B
Symbol Function*
LOC547983 phosphatidylinositol 3-kinase
LOC732567 autophagy protein 5
LOC732654 autophagy-related protein 9
ATG8d autophagy-related protein 8d
LOC100305892 uncharacterized LOC100305892
LOC100306050 uncharacterized LOC100306050
LOC100306136 glutathione peroxidase family protein
LOC100499835 autophagy-related protein 8f-like
LOC100500023 uncharacterized LOC100500023
LOC100500165 uncharacterized LOC100500165
LOC100527345 UBQ superfamily protein
LOC100775812 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC100777178 regulatory-associated protein of TOR 1
LOC100777405 autophagy-related protein 9
LOC100778254 autophagy-related protein 13a
LOC100779069 probable E3 ubiquitin-protein ligase ZFP1
LOC100779159 regulatory-associated protein of TOR 1
LOC100779344 autophagy-related protein 9
LOC100779360 uncharacterized LOC100779360
LOC100780128 uncharacterized LOC100780128
LOC100781703 autophagy-related protein 8f
LOC100782279 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC100783950 serine/threonine-protein phosphatase PP2A-5 catalytic subunit
LOC100784247 glutamate receptor 3.7
LOC100784312 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC100784677 autophagy-related protein 8C
ATG3A autophagy-related protein 3a
LOC100787548 uncharacterized LOC100787548
LOC100789045 autophagy protein 5-like
LOC100792447 autophagy-related protein 11
LOC100794018 autophagy-related protein 11
LOC100794029 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC100796396 uncharacterized LOC100796396
LOC100796837 serine/threonine-protein kinase VPS15
LOC100798408 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC100802641 autophagy-related protein 2
LOC100803094 nicotinamide adenine dinucleotide transporter 1, chloroplastic
LOC100803790 mitochondrial Rho GTPase 2
LOC100805552 autophagy-related protein 2
LOC100806799 splicing factor 3B subunit 3
LOC100807329 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC100809347 autophagy-related protein 9
LOC100809664 cysteine protease ATG4
LOC100810317 cysteine protease ATG4
LOC100812326 serine/threonine-protein phosphatase PP2A-2 catalytic subunit
LOC100813446 ubiquitin-conjugating enzyme E2 20
LOC100814257 autophagy-related protein 3
LOC100815547 phospholipid-transporting ATPase 3
LOC100816446 serine/threonine-protein kinase TOR
LOC100816558 serine/threonine-protein kinase TOR
LOC100817449 serine/threonine-protein phosphatase PP2A-4 catalytic subunit
LOC100818104 autophagy-related protein 13a
LOC100818315 autophagy-related protein 8f
LOC100818467 serine/threonine-protein kinase VPS15
LOC100818620 autophagy-related protein 8f-like
LOC100819364 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B
Symbol Function*
LOC100736470 autophagy 8h
LOC101244264 autophagy-related protein 13
LOC101245881 serine/threonine-protein phosphatase PP2A-5 catalytic subunit
LOC101246095 autophagy-related protein 8C
LOC101246150 probable serine/threonine protein kinase IREH1
LOC101246173 regulatory-associated protein of TOR 1
LOC101246518 uncharacterized LOC101246518
LOC101246749 histone acetyltransferase HAC1-like
LOC101246793 ubiquitin-like modifier-activating enzyme atg7
LOC101247472 E3 ubiquitin-protein ligase UPL3
LOC101247744 serine/threonine-protein kinase ATG1c
LOC101248472 serine/threonine-protein kinase VPS15
LOC101249556 autophagy-related protein 3
LOC101249673 cysteine protease ATG4
LOC101250591 phosphatidylinositol 3-kinase, root isoform
LOC101251393 autophagy-related protein 11
LOC101251821 protein MEI2-like 2
LOC101251927 transmembrane protein adipocyte-associated 1
SIZ1 E3 SUMO-protein ligase SIZ1
LOC101253273 autophagy-related protein 16
LOC101254295 autophagy-related protein 9
LOC101255009 autophagy-related protein 18b
LOC101257003 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC101259540 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
LOC101259616 ubiquitin-like protein ATG12
LOC101260283 autophagy-related protein 2
LOC101263274 autophagy-related protein 101
LOC101264868 E3 ubiquitin-protein ligase UPL3
LOC101266988 regulatory-associated protein of TOR 2
Symbol Function*
LOC4324174 actin-related protein 2/3 complex subunit 2A
LOC4324394 beclin-1-like protein
LOC4326644 ubiquitin-like modifier-activating enzyme atg7
LOC4327346 autophagy-related protein 3
LOC4328503 autophagy-related protein 11
LOC4330978 autophagy-related protein 18b
LOC4331010 serine/threonine-protein kinase VPS15
LOC4331747 serine/threonine-protein phosphatase PP2A-4 catalytic subunit-like
LOC4332036 plant intracellular Ras-group-related LRR protein 7-like
LOC4332250 autophagy-related protein 9
LOC4333557 beclin-1-like protein
LOC4333729 protein LST8 homolog
LOC4334090 autophagy-related protein 16
LOC4336527 autophagy-related protein 13a
LOC4337052 autophagy-related protein 8B-like
LOC4337435 cysteine protease ATG4B-like
LOC4337855 heparan-alpha-glucosaminide N-acetyltransferase
LOC4337982 phosphatidylinositol 3-kinase, root isoform
LOC4338595 lipase
LOC4338754 autophagy-related protein 18h
LOC4339037 E3 ubiquitin-protein ligase UPL4
LOC4340716 autophagy-related protein 2
LOC4342057 UPF0183 protein At3g51130
LOC4342644 ras-related protein RABE1d
LOC4343365 autophagy-related protein 8A-like
LOC4343724 uncharacterized LOC4343724
LOC4343968 uncharacterized LOC4343968
LOC4344857 autophagy-related protein 8C-like
LOC4347326 uncharacterized LOC4347326
LOC4347752 enoyl-CoA hydratase 2, peroxisomal
LOC4348601 serine/threonine-protein phosphatase PP2A-4 catalytic subunit-like
LOC4349535 uncharacterized LOC4349535
LOC4349589 uncharacterized LOC4349589
LOC4349739 PP2A regulatory subunit TAP46-like
LOC4351289 regulatory-associated protein of TOR 1-like
LOC4351453 PP2A regulatory subunit TAP46-like
LOC4352156 autophagy-related protein 101
LOC9266997 regulatory-associated protein of TOR 2-like
LOC9267831 protein NRT1/ PTR FAMILY 8.3
LOC9267916 ubiquitin-like-conjugating enzyme ATG10
LOC9268534 serine/threonine-protein kinase ATG1c
LOC9271984 autophagy-related protein 13a
Symbol Function*
LOC100193737 uncharacterized LOC100193737
LOC100193787 uncharacterized LOC100193787
LOC100240694 uncharacterized LOC100240694
LOC100240695 uncharacterized LOC100240695
LOC100240696 uncharacterized LOC100240696
LOC100240697 uncharacterized LOC100240697
LOC100240698 uncharacterized LOC100240698
LOC100275011 uncharacterized LOC100275011
LOC100275582 uncharacterized LOC100275582
LOC100275976 uncharacterized LOC100275976
LOC100279306 putative regulator of chromosome condensation (RCC1) family protein
LOC100279742 uncharacterized LOC100279742
LOC100279947 uncharacterized LOC100279947
LOC100282252 ORMDL family protein
LOC100282302 uncharacterized LOC100282302
LOC100283820 uncharacterized LOC100283820
LOC100303978 uncharacterized LOC100303978
LOC100381284 putative serine/threonine protein phosphatase superfamily protein
LOC100382597 uncharacterized LOC100382597
LOC100383018 uncharacterized LOC100383018
LOC100502331 autophagy protein 9
LOC103627860 serine/threonine-protein kinase VPS15
LOC103629977 autophagy-related protein 2
LOC103630344 autophagy-related protein 18h
LOC103633920 auxin transport protein BIG
LOC103634282 serine/threonine-protein kinase ATG1c
LOC103635676 autophagy-related protein 18h
LOC103640651 regulatory-associated protein of TOR 2
LOC103647275 Calcineurin-like metallo-phosphoesterase superfamily protein
LOC103653397 phosphatidylinositol 3-kinase, root isoform
LOC103654173 uncharacterized LOC103654173
LOC103654871 putative autophagy domain family protein
LOC109939169 autophagy-related protein 101
LOC109942396 autophagy-related protein 2
Symbol Function*
LOC103827657 deSI-like protein At4g17486
LOC103835694 phosphoinositide phosphatase SAC1
LOC103836199 aspartic proteinase A1-like
LOC103837724 autophagy-related protein 101
LOC103837855 autophagy-related protein 13b-like
LOC103838506 phosphatidylinositol 3-kinase VPS34
LOC103839247 casein kinase 1-like protein 8
LOC103839823 autophagy-related protein 8a
LOC103841029 UPF0183 protein At3g51130-like
LOC103841728 serine/threonine-protein phosphatase PP2A-3 catalytic subunit
LOC103846258 autophagy protein 5-like
LOC103847692 autophagy-related protein 8f
LOC103851096 autophagy protein 5
LOC103852366 autophagy-related protein 11
LOC103853623 phosphoinositide 3-kinase regulatory subunit 4
LOC103854465 probable serine incorporator
LOC103859328 regulatory-associated protein of TOR 1
LOC103859686 autophagy-related protein 8a
LOC103860339 autophagy-related protein 8d
LOC103861273 autophagy-related protein 8a
LOC103862002 autophagy-related protein 11-like
LOC103862981 serine/threonine-protein phosphatase PP2A-3 catalytic subunit
LOC103866645 serine/threonine-protein phosphatase PP2A-4 catalytic subunit
LOC103866769 cysteine protease ATG4a
LOC103868162 autophagy-related protein 8a-like
LOC103870584 regulatory-associated protein of TOR 1-like
LOC103871063 ubiquitin-like protein ATG12A
LOC103871369 serine/threonine-protein kinase TOR
LOC103873481 autophagy-related protein 13a-like
Symbol Function*
LOC100232897 beclin-1-like protein
LOC100245008 autophagy-related protein 16
LOC100245377 autophagy-related protein 13b
LOC100245938 autophagy-related protein 18g
LOC100246909 autophagy-related protein 8C
LOC100248696 autophagy-related protein 8i
LOC100249628 serine/threonine-protein kinase BLUS1
LOC100249713 serine/threonine-protein kinase TOR
LOC100250287 autophagy-related protein 18h
LOC100251048 serine/threonine-protein kinase ATG1c
LOC100251554 ubiquitin-like modifier-activating enzyme atg7
LOC100255545 cysteine protease ATG4
LOC100256057 probable serine/threonine-protein kinase vps15
LOC100256981 serine/threonine-protein phosphatase PP2A-2 catalytic subunit
LOC100257758 tetratricopeptide repeat protein 5
LOC100258507 autophagy-related protein 8A
LOC100260865 autophagy-related protein 8f
LOC100261361 cullin-1
LOC100261889 regulatory-associated protein of TOR 1
LOC100262770 dnaJ homolog subfamily C GRV2
LOC100264435 autophagy-related protein 8f
LOC100264989 autophagy-related protein 3
LOC100265901 sorcin
LOC100267243 serine/threonine-protein phosphatase PP2A catalytic subunit-like
LOC100852920 UPF0183 protein At3g51130
Symbol Function*
LOC7454967 serine/threonine-protein kinase ATG1c
LOC7455625 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC7455889 uncharacterized LOC7455889
LOC7457348 ubiquitin-conjugating enzyme E2 4
LOC7457395 beclin-1-like protein
LOC7459240 U-box domain-containing protein 62
LOC7460425 regulatory-associated protein of TOR 1
LOC7460490 autophagy-related protein 8i
LOC7461371 serine/threonine-protein phosphatase PP2A-2 catalytic subunit
LOC7461702 autophagy-related protein 8f
LOC7463073 autophagy-related protein 16
LOC7463622 autophagy-related protein 8B
LOC7465493 autophagy-related protein 3
LOC7467222 E3 ubiquitin-protein ligase UPL1
LOC7467506 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2
LOC7468077 regulatory-associated protein of TOR 1
LOC7468504 autophagy-related protein 8d
LOC7469909 serine/threonine-protein phosphatase PP2A-4 catalytic subunit
LOC7470216 ubiquitin-like modifier-activating enzyme atg7
LOC7473234 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC7475065 ras-related protein Rab7
LOC7477976 autophagy-related protein 101
LOC7478809 serine/threonine-protein kinase ATG1a
LOC7479209 autophagy-related protein 8f
LOC7483257 serine/threonine-protein phosphatase PP2A-3 catalytic subunit
LOC7483459 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC7485264 autophagy-related protein 11
LOC7485871 autophagy-related protein 8i
LOC7486672 uncharacterized LOC7486672
LOC7489899 autophagy-related protein 8C
LOC7492408 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC7497728 lysosomal Pro-X carboxypeptidase
LOC7498225 autophagy-related protein 8i
Symbol Function*
LOC11406119 autophagy-related protein 101
LOC11406603 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC11409414 E3 ubiquitin-protein ligase PRT6
LOC11410993 autophagy-related protein 8f
LOC11411155 ubiquitin-conjugating enzyme E2 variant 1B
LOC11416140 transmembrane protein 50 homolog
LOC11416610 serine/threonine-protein phosphatase PP2A catalytic subunit
LOC11417013 AMSH-like ubiquitin thioesterase 1
LOC11421620 clathrin light chain 1
LOC11423981 ubiquitin-like protein ATG12
LOC11424644 autophagy-related protein 8i
LOC11428688 regulatory-associated protein of TOR 1
LOC11431581 autophagy-related protein 8B
LOC11432967 protein YIPF5 homolog
LOC11433638 autophagy protein 5
LOC11434861 PP2A regulatory subunit TAP46
LOC11437356 mediator of RNA polymerase II transcription subunit 13
LOC11437911 serine/threonine-protein kinase TOR
LOC11443804 autophagy-related protein 8i
LOC11446800 autophagy-related protein 18b
LOC25489523 autophagy-related protein 16
LOC25490107 protein PEROXIN-4
LOC25491508 serine/threonine-protein kinase ATG1c
LOC25491869 autophagy-related protein 3
LOC25492141 autophagy-related protein 8A
LOC25499241 autophagy-related protein 9
LOC25500869 ubiquitin-conjugating enzyme E2 5


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