ATTED-II   version 5.5

ATTED-II; Arabidopsis thaliana trans-factor and cis-element prediction database



(last update) 2010.03.05

FAQ

  1. How does ATTED-II select genes to draw gene network?

    2. The actual procedure of NetworkDrawer is as follows:
    • (1) Searching additional genes.
    • (1-1) Checking coexpressed (Top 3 MR) genes from query genes.
    • (1-2) Checking PPI genes from query genes. [option]
    • (1-3) Summarizing genes with at least two edges to the query genes.
    • (2) Making gene network of the genes to draw.

  1. Can I retrieve genes specifically expressed in the samples I specify?

    2. Sorry. We do not prepare such function.