ATTED-II

ver. 8.0

last update; Aug. 17. 2013

History of data version

DB version Release Date Gene coexpression
Ath-m
(Ath)
Ath-r
(Ath2)
Osa-m
(Osa)
Gma-m
(Gma)
Zma-m
(Zma)
Vvi-m
(Vvi)
Ppo-m
(Ppo)
Mtr-m
(Mtr)
ATTED-II (Arabidopsis thaliana trans-factor and cis-element prediction database)
ver.8.0 2015.09.01 c6.0 c2.0 c5.0 c2.0 c2.0 c2.0 c2.0
ver.7.2 2015.01.26 c4.0
ver.7.1 2013.08.17 c1.0
ver.7.0 2013.05.23 c5.0   c3.0 c1.0 c1.0 c1.0 c1.0 c1.0
ver.6.0 2010.09.28   c2.0          
ver.5.4 2009.07.01   c1.0          
ver.5.1 2008.04.08 c4.1              
ver.5.0 2008.03.18 c4.0              
ver.4.3 2007.09.12 c3.1              
ver.4.0 2006.05.25 c3.0              
ATTED (Arabidopsis thaliana tissue-specific expression database)
ver.3.0 2005.02.13 c1.0              
ver.2.0 2004.11.14 c0.1              
DB version Release Date Gene model Functional gene group Gene annotation Protein annotation Reported cis element
TAIR::Sequences::blast_datasets TAIR::Ontologies TAIR::Pathways KEGG Kazusa GO AGRIS TAIR::Genes TAIR::Proteins ATTED PLACE
ATH1_pep
ATH1_seq
ATH1_cdna_cm
upstream1000
ATH_GO_GOSLIM aracyc_dump ath_gene_map map_title.tab KaPPA_loci
(Reaction_gene)
KaPPA_title GO.defs AGRIS gene_alias TargetP
mw
ip
membrane
WoLF PSORT place.tab
ATTED-II (Arabidopsis thaliana trans-factor and cis-element prediction database)
ver.7.0 2013.05.23 2011.05.11 (TAIR10) 2012.09.18 2012.08.27 2011.02.11 2011.02.05 2012.06.01 2013.01.30 2011.05.11 ver.6
ver.6.0 2010.09.28 2010.09.14 2010.06.21 2010.09.18 2010.09.22 2009.07.27 2010.04.13
ver.5.5 2009.07.08 2009.06.20 (TAIR9) 2009.07.01 2009.07.04 2009.06.30 2009.06.27 2009.06.20 ver.5
ver.5.3 2009.05.27 2009.05.26 2009.03.11 2009.05.22 2009.05.14 ver.3.544 2009.03.13
ver.5.2 2008.07.19 2008.04.24 (TAIR8) 2008.07.12 2008.06.11 2008.07.11 2008.07.09 ver.3.536 2008.04.24 2008.04.24 ver.4
ver.5.0 2008.03.18 2008.03.08 2008.03.09 2008.02.25 ver.3.533 2007.11.15
ver.4.4 2007.10.16 2007.10.13 2007.10.05 2007.10.14 2007.10.02
ver.4.3 2007.09.12 2007.04.25 (TAIR7) 2007.08.25 2007.07.03 2007.08.30 2007.08.21 ver.3.526 2007.08.06 2007.04.21 ver.3
ver.4.2 2006.07.24 2006.06.01
ver.4.1 2006.06.03 2006.05.27 2006.05.30 2006.05.30 ver.2  
ver.4.0 2006.05.25 2005.11.08 (TAIR6) 2006.05.20 2006.02.14 2006.05.17 2006.05.11 2005.04.25 ver.3.458 2006.03.15 2005.12.08 2005.11.07  
ver.3.3 2005.08.29 2005.08.20 2005.04.12 2005.08.22 2005.08.23 2005.08.02 ver.1  
ATTED (Arabidopsis thaliana tissue-specific expression database)
ver.3.1 2005.03.25 2005.03.10 2005.03.10      
ver.3.0 2005.02.13 2004.02.28 (TAIR5) 2005.02.05 2005.02.05 2005.02.10       2004.03.12    
ver.2.1 2004.12.08 2004.12.04 2004.12.08          
ver.2.0 2004.11.14 2004.11.04 2004.5.20 2004.10.28       2004.11.05    
ver.1.1 2004.04.14 2004.03.23 2004.04.05     2004.04.12      
ver.1.0 2004.03.24 2003.04.17 (TAIR4) 2003.12.01       2003.11.13 2002.10.09